EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000011741 (Gene tree)
Gene ID: 112146047
Gene Symbol: ern1
Alias: -
Full Name: endoplasmic reticulum to nucleus signaling 1
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 14123 bases
Position: chrNVQA01000010.1:11166391-11180513
Accession: 112146047
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000010463	Ribonuc_2-5A	PF06479.12	2.9e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000031903	-	4475	XM_024271622	ENSOMEP00000010463	1072 (aa)	XP_024127390	UPI000CF7FAB2

Gene Model

Click here to download ENSOMEG00000011741's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000011741's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000011741	ern1	87	56.586	ENSOMEG00000022267	ern2	99	55.475

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000011741	ern1	99	85.847	ENSAPOG00000009999	ern1	98	85.847	Acanthochromis_polyacanthus
ENSOMEG00000011741	ern1	99	86.330	ENSACIG00000021716	ern1	98	86.330	Amphilophus_citrinellus
ENSOMEG00000011741	ern1	99	86.803	ENSAOCG00000012309	ern1	98	86.803	Amphiprion_ocellaris
ENSOMEG00000011741	ern1	99	86.431	ENSAPEG00000011263	ern1	98	92.000	Amphiprion_percula
ENSOMEG00000011741	ern1	100	85.820	ENSATEG00000024468	ern1	98	85.820	Anabas_testudineus
ENSOMEG00000011741	ern1	99	86.124	ENSACLG00000027919	ern1	99	86.124	Astatotilapia_calliptera
ENSOMEG00000011741	ern1	90	83.661	ENSAMXG00000000944	ern1	93	83.661	Astyanax_mexicanus
ENSOMEG00000011741	ern1	95	84.570	ENSCSEG00000014500	ern1	99	84.961	Cynoglossus_semilaevis
ENSOMEG00000011741	ern1	100	84.074	ENSCVAG00000002988	ern1	96	88.201	Cyprinodon_variegatus
ENSOMEG00000011741	ern1	90	81.237	ENSDARG00000013997	ern1	100	81.516	Danio_rerio
ENSOMEG00000011741	ern1	89	80.287	ENSELUG00000005957	ern1	93	80.493	Esox_lucius
ENSOMEG00000011741	ern1	94	86.457	ENSFHEG00000005578	ern1	95	86.457	Fundulus_heteroclitus
ENSOMEG00000011741	ern1	87	85.000	ENSGMOG00000011232	ern1	100	85.000	Gadus_morhua
ENSOMEG00000011741	ern1	100	84.508	ENSGAFG00000020231	ern1	99	84.508	Gambusia_affinis
ENSOMEG00000011741	ern1	89	87.630	ENSGACG00000011700	ern1	99	87.630	Gasterosteus_aculeatus
ENSOMEG00000011741	ern1	98	86.351	ENSHBUG00000012581	ern1	98	86.351	Haplochromis_burtoni
ENSOMEG00000011741	ern1	95	83.317	ENSHCOG00000016199	ern1	94	86.002	Hippocampus_comes
ENSOMEG00000011741	ern1	90	83.661	ENSIPUG00000011083	ern1	93	83.661	Ictalurus_punctatus
ENSOMEG00000011741	ern1	100	84.186	ENSKMAG00000019499	ern1	98	84.186	Kryptolebias_marmoratus
ENSOMEG00000011741	ern1	98	82.863	ENSLBEG00000025907	ern1	98	82.863	Labrus_bergylta
ENSOMEG00000011741	ern1	100	85.000	ENSMAMG00000023439	ern1	98	85.463	Mastacembelus_armatus
ENSOMEG00000011741	ern1	99	86.124	ENSMZEG00005003221	ern1	99	86.124	Maylandia_zebra
ENSOMEG00000011741	ern1	90	88.000	ENSMMOG00000007650	ern1	97	88.000	Mola_mola
ENSOMEG00000011741	ern1	100	84.323	ENSMALG00000017775	ern1	96	84.323	Monopterus_albus
ENSOMEG00000011741	ern1	98	86.540	ENSNBRG00000002179	ern1	98	86.540	Neolamprologus_brichardi
ENSOMEG00000011741	ern1	89	89.540	ENSONIG00000017169	ern1	99	89.540	Oreochromis_niloticus
ENSOMEG00000011741	ern1	100	95.340	ENSORLG00000008940	ern1	100	95.340	Oryzias_latipes
ENSOMEG00000011741	ern1	100	95.340	ENSORLG00020018387	ern1	100	95.340	Oryzias_latipes_hni
ENSOMEG00000011741	ern1	100	95.336	ENSORLG00015007946	ern1	100	95.336	Oryzias_latipes_hsok
ENSOMEG00000011741	ern1	88	82.180	ENSPKIG00000005593	ern1	96	82.180	Paramormyrops_kingsleyae
ENSOMEG00000011741	ern1	99	83.067	ENSPMGG00000020442	ern1	96	86.546	Periophthalmus_magnuspinnatus
ENSOMEG00000011741	ern1	98	86.321	ENSPFOG00000007378	ern1	98	86.321	Poecilia_formosa
ENSOMEG00000011741	ern1	100	85.343	ENSPLAG00000014780	ern1	99	85.343	Poecilia_latipinna
ENSOMEG00000011741	ern1	100	85.529	ENSPMEG00000016324	ern1	99	85.529	Poecilia_mexicana
ENSOMEG00000011741	ern1	100	84.879	ENSPREG00000006286	ern1	99	84.879	Poecilia_reticulata
ENSOMEG00000011741	ern1	99	86.216	ENSPNYG00000017929	ern1	99	88.361	Pundamilia_nyererei
ENSOMEG00000011741	ern1	97	79.429	ENSPNAG00000029447	ern1	99	79.619	Pygocentrus_nattereri
ENSOMEG00000011741	ern1	99	84.137	ENSSMAG00000015042	ern1	98	84.137	Scophthalmus_maximus
ENSOMEG00000011741	ern1	100	87.118	ENSSDUG00000009098	ern1	98	87.118	Seriola_dumerili
ENSOMEG00000011741	ern1	100	86.840	ENSSLDG00000023254	ern1	98	86.840	Seriola_lalandi_dorsalis
ENSOMEG00000011741	ern1	99	85.927	ENSSPAG00000017539	ern1	98	85.927	Stegastes_partitus
ENSOMEG00000011741	ern1	94	83.941	ENSTRUG00000001041	ern1	97	83.645	Takifugu_rubripes
ENSOMEG00000011741	ern1	88	88.409	ENSTNIG00000017990	ern1	98	89.267	Tetraodon_nigroviridis
ENSOMEG00000011741	ern1	92	89.655	ENSXCOG00000010330	ern1	95	90.113	Xiphophorus_couchianus
ENSOMEG00000011741	ern1	100	84.787	ENSXMAG00000001310	ern1	99	84.787	Xiphophorus_maculatus