EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000011821 (Gene tree)
Gene ID: 112147851
Gene Symbol: -
Alias: -
Full Name: RNA-binding Raly-like protein
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 37274 bases
Position: chrNVQA01000011.1:1182489-1219762
Accession: 112147851
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000010542	RRM_1	PF00076.22	6.1e-12	1	1
ENSOMEP00000010553	RRM_1	PF00076.22	6.1e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000017377	-	1991	-	ENSOMEP00000010542	289 (aa)	XP_024130266	UPI000CF800DC
ENSOMET00000017381	-	2110	-	ENSOMEP00000010553	289 (aa)	XP_024130266	UPI000CF800DC

Gene Model

Click here to download ENSOMEG00000011821's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000011821's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000011821	-	75	56.951	ENSOMEG00000022665	-	66	59.471
ENSOMEG00000011821	-	100	71.284	ENSOMEG00000001170	-	100	72.973
ENSOMEG00000011821	-	75	56.000	ENSOMEG00000020488	-	68	55.507

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000011821	-	100	87.671	ENSAPOG00000008744	-	100	87.671	Acanthochromis_polyacanthus
ENSOMEG00000011821	-	97	77.663	ENSACIG00000007143	-	91	77.455	Amphilophus_citrinellus
ENSOMEG00000011821	-	100	71.284	ENSAOCG00000001605	-	100	72.973	Amphiprion_ocellaris
ENSOMEG00000011821	-	100	89.384	ENSAOCG00000023599	-	100	89.384	Amphiprion_ocellaris
ENSOMEG00000011821	-	88	69.141	ENSATEG00000023356	-	98	69.922	Anabas_testudineus
ENSOMEG00000011821	-	97	79.322	ENSATEG00000022219	-	88	83.513	Anabas_testudineus
ENSOMEG00000011821	-	100	88.356	ENSACLG00000011720	-	100	88.356	Astatotilapia_calliptera
ENSOMEG00000011821	-	100	71.284	ENSACLG00000006949	-	100	71.622	Astatotilapia_calliptera
ENSOMEG00000011821	-	100	64.310	ENSAMXG00000032617	-	90	66.292	Astyanax_mexicanus
ENSOMEG00000011821	-	100	69.595	ENSAMXG00000019031	-	100	69.595	Astyanax_mexicanus
ENSOMEG00000011821	-	100	81.443	ENSCSEG00000014237	-	100	81.443	Cynoglossus_semilaevis
ENSOMEG00000011821	-	100	88.699	ENSCVAG00000013624	-	100	88.699	Cyprinodon_variegatus
ENSOMEG00000011821	-	100	70.946	ENSCVAG00000018104	-	100	71.959	Cyprinodon_variegatus
ENSOMEG00000011821	-	63	71.038	ENSDARG00000090292	ralyl	81	77.778	Danio_rerio
ENSOMEG00000011821	-	93	63.235	ENSELUG00000001702	-	92	63.602	Esox_lucius
ENSOMEG00000011821	-	57	70.303	ENSGMOG00000005914	-	100	70.303	Gadus_morhua
ENSOMEG00000011821	-	61	78.090	ENSGACG00000004991	-	91	81.928	Gasterosteus_aculeatus
ENSOMEG00000011821	-	100	88.699	ENSHBUG00000010040	-	100	88.699	Haplochromis_burtoni
ENSOMEG00000011821	-	100	71.284	ENSHBUG00000015412	-	100	71.622	Haplochromis_burtoni
ENSOMEG00000011821	-	100	70.270	ENSIPUG00000000507	ralyl	100	70.608	Ictalurus_punctatus
ENSOMEG00000011821	-	100	85.959	ENSKMAG00000022093	-	100	86.301	Kryptolebias_marmoratus
ENSOMEG00000011821	-	100	70.270	ENSKMAG00000018155	-	100	72.297	Kryptolebias_marmoratus
ENSOMEG00000011821	-	100	85.616	ENSLBEG00000012873	-	100	85.616	Labrus_bergylta
ENSOMEG00000011821	-	100	71.284	ENSLBEG00000011011	-	100	71.284	Labrus_bergylta
ENSOMEG00000011821	-	100	68.243	ENSLOCG00000012787	ralyl	99	67.230	Lepisosteus_oculatus
ENSOMEG00000011821	-	99	82.414	ENSMAMG00000001723	-	89	84.015	Mastacembelus_armatus
ENSOMEG00000011821	-	98	68.814	ENSMZEG00005018748	-	93	70.290	Maylandia_zebra
ENSOMEG00000011821	-	100	88.356	ENSMZEG00005024447	-	100	88.356	Maylandia_zebra
ENSOMEG00000011821	-	97	80.068	ENSMMOG00000020441	-	81	82.143	Mola_mola
ENSOMEG00000011821	-	100	69.595	ENSMALG00000012952	-	100	70.270	Monopterus_albus
ENSOMEG00000011821	-	100	87.671	ENSMALG00000019019	-	78	87.671	Monopterus_albus
ENSOMEG00000011821	-	98	68.475	ENSNBRG00000011376	-	93	71.739	Neolamprologus_brichardi
ENSOMEG00000011821	-	97	78.007	ENSNBRG00000011206	-	91	77.818	Neolamprologus_brichardi
ENSOMEG00000011821	-	100	91.034	ENSORLG00000017934	-	100	91.034	Oryzias_latipes
ENSOMEG00000011821	-	100	71.284	ENSORLG00000012719	-	100	72.973	Oryzias_latipes
ENSOMEG00000011821	-	100	71.284	ENSORLG00020004438	-	100	72.973	Oryzias_latipes_hni
ENSOMEG00000011821	-	100	90.000	ENSORLG00020000082	-	100	90.000	Oryzias_latipes_hni
ENSOMEG00000011821	-	100	90.690	ENSORLG00015004280	-	100	90.690	Oryzias_latipes_hsok
ENSOMEG00000011821	-	100	71.284	ENSORLG00015004727	-	100	72.973	Oryzias_latipes_hsok
ENSOMEG00000011821	-	100	70.648	ENSPKIG00000015926	-	100	71.044	Paramormyrops_kingsleyae
ENSOMEG00000011821	-	79	69.099	ENSPMGG00000014481	-	95	70.386	Periophthalmus_magnuspinnatus
ENSOMEG00000011821	-	99	71.622	ENSPMGG00000009532	-	91	72.263	Periophthalmus_magnuspinnatus
ENSOMEG00000011821	-	97	84.354	ENSPFOG00000006120	-	93	84.532	Poecilia_formosa
ENSOMEG00000011821	-	97	70.345	ENSPLAG00000011323	ralyl	94	72.628	Poecilia_latipinna
ENSOMEG00000011821	-	97	80.986	ENSPLAG00000009877	-	71	80.970	Poecilia_latipinna
ENSOMEG00000011821	-	97	70.345	ENSPMEG00000023847	ralyl	94	72.628	Poecilia_mexicana
ENSOMEG00000011821	-	97	80.986	ENSPMEG00000013624	-	75	80.970	Poecilia_mexicana
ENSOMEG00000011821	-	97	69.655	ENSPREG00000001956	ralyl	94	71.533	Poecilia_reticulata
ENSOMEG00000011821	-	97	87.986	ENSPREG00000013805	-	100	82.372	Poecilia_reticulata
ENSOMEG00000011821	-	98	68.814	ENSPNYG00000003548	-	93	70.290	Pundamilia_nyererei
ENSOMEG00000011821	-	97	78.007	ENSPNYG00000008772	-	91	77.818	Pundamilia_nyererei
ENSOMEG00000011821	-	100	68.919	ENSPNAG00000000498	-	88	68.919	Pygocentrus_nattereri
ENSOMEG00000011821	-	100	66.438	ENSPNAG00000026098	-	100	66.438	Pygocentrus_nattereri
ENSOMEG00000011821	-	97	65.734	ENSSFOG00015004575	-	100	61.017	Scleropages_formosus
ENSOMEG00000011821	-	100	71.622	ENSSFOG00015009401	-	100	71.622	Scleropages_formosus
ENSOMEG00000011821	-	100	70.270	ENSSMAG00000005608	-	100	70.608	Scophthalmus_maximus
ENSOMEG00000011821	-	97	82.456	ENSSMAG00000015907	-	87	82.528	Scophthalmus_maximus
ENSOMEG00000011821	-	100	89.041	ENSSDUG00000012473	-	100	89.041	Seriola_dumerili
ENSOMEG00000011821	-	100	70.946	ENSSDUG00000007587	-	100	71.622	Seriola_dumerili
ENSOMEG00000011821	-	100	70.946	ENSSLDG00000020603	-	100	71.622	Seriola_lalandi_dorsalis
ENSOMEG00000011821	-	100	88.699	ENSSLDG00000011534	-	100	88.699	Seriola_lalandi_dorsalis
ENSOMEG00000011821	-	100	72.603	ENSSPAG00000013858	-	87	74.532	Stegastes_partitus
ENSOMEG00000011821	-	97	81.979	ENSTRUG00000003829	-	90	79.775	Takifugu_rubripes
ENSOMEG00000011821	-	97	77.891	ENSTNIG00000005594	-	93	77.698	Tetraodon_nigroviridis
ENSOMEG00000011821	-	100	63.758	ENSXETG00000017729	ralyl	99	63.087	Xenopus_tropicalis
ENSOMEG00000011821	-	97	68.121	ENSXCOG00000015156	-	88	70.567	Xiphophorus_couchianus
ENSOMEG00000011821	-	100	88.699	ENSXMAG00000007614	-	100	88.699	Xiphophorus_maculatus
ENSOMEG00000011821	-	100	71.284	ENSXMAG00000008396	-	100	72.973	Xiphophorus_maculatus