EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000011834 (Gene tree)
Gene ID: 112148669
Gene Symbol: snrnp200
Alias: -
Full Name: small nuclear ribonucleoprotein U5 subunit 200
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 11370 bases
Position: chrNVQA01000012.1:9035880-9047249
Accession: 112148669
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000028629	ResIII	PF04851.15	1e-26	1	2
ENSOMEP00000028629	ResIII	PF04851.15	1e-26	2	2
ENSOMEP00000028629	DEAD	PF00270.29	3.2e-54	1	2
ENSOMEP00000028629	DEAD	PF00270.29	3.2e-54	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000017372	-	6518	XM_024275933	ENSOMEP00000028629	2136 (aa)	XP_024131701	UPI000CF80049

Gene Model

Click here to download ENSOMEG00000011834's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000011834's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000011834	snrnp200	70	30.833	ENSOMEG00000016474	hfm1	57	30.833
ENSOMEG00000011834	snrnp200	87	43.017	ENSOMEG00000019630	ascc3	89	43.024

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000011834	snrnp200	99	90.449	ENSG00000144028	SNRNP200	99	90.559	Homo_sapiens
ENSOMEG00000011834	snrnp200	100	96.957	ENSAPOG00000010223	snrnp200	100	96.957	Acanthochromis_polyacanthus
ENSOMEG00000011834	snrnp200	99	90.403	ENSAMEG00000008996	SNRNP200	99	90.512	Ailuropoda_melanoleuca
ENSOMEG00000011834	snrnp200	97	96.838	ENSACIG00000001764	snrnp200	98	96.838	Amphilophus_citrinellus
ENSOMEG00000011834	snrnp200	100	96.770	ENSAOCG00000024593	snrnp200	100	96.770	Amphiprion_ocellaris
ENSOMEG00000011834	snrnp200	97	96.034	ENSAPEG00000012554	snrnp200	100	96.034	Amphiprion_percula
ENSOMEG00000011834	snrnp200	100	96.770	ENSATEG00000022522	snrnp200	100	96.770	Anabas_testudineus
ENSOMEG00000011834	snrnp200	99	90.523	ENSAPLG00000004313	SNRNP200	99	90.587	Anas_platyrhynchos
ENSOMEG00000011834	snrnp200	99	89.523	ENSACAG00000000434	SNRNP200	100	89.523	Anolis_carolinensis
ENSOMEG00000011834	snrnp200	99	87.015	ENSANAG00000036625	SNRNP200	99	86.926	Aotus_nancymaae
ENSOMEG00000011834	snrnp200	100	96.255	ENSACLG00000011188	snrnp200	100	96.255	Astatotilapia_calliptera
ENSOMEG00000011834	snrnp200	99	93.700	ENSAMXG00000005684	snrnp200	99	93.700	Astyanax_mexicanus
ENSOMEG00000011834	snrnp200	99	90.075	ENSBTAG00000000848	SNRNP200	99	90.183	Bos_taurus
ENSOMEG00000011834	snrnp200	99	90.449	ENSCJAG00000007514	SNRNP200	99	90.559	Callithrix_jacchus
ENSOMEG00000011834	snrnp200	99	89.641	ENSCAFG00020019979	SNRNP200	99	91.740	Canis_lupus_dingo
ENSOMEG00000011834	snrnp200	99	90.122	ENSCHIG00000020611	SNRNP200	99	90.230	Capra_hircus
ENSOMEG00000011834	snrnp200	99	90.496	ENSTSYG00000010467	SNRNP200	99	90.606	Carlito_syrichta
ENSOMEG00000011834	snrnp200	99	89.986	ENSCAPG00000017234	SNRNP200	99	90.094	Cavia_aperea
ENSOMEG00000011834	snrnp200	99	90.309	ENSCPOG00000006776	SNRNP200	99	90.418	Cavia_porcellus
ENSOMEG00000011834	snrnp200	99	90.449	ENSCCAG00000033962	SNRNP200	99	90.559	Cebus_capucinus
ENSOMEG00000011834	snrnp200	99	90.449	ENSCATG00000015790	SNRNP200	99	90.559	Cercocebus_atys
ENSOMEG00000011834	snrnp200	99	90.356	ENSCLAG00000004116	SNRNP200	99	90.465	Chinchilla_lanigera
ENSOMEG00000011834	snrnp200	99	90.449	ENSCSAG00000017369	SNRNP200	99	90.559	Chlorocebus_sabaeus
ENSOMEG00000011834	snrnp200	73	92.126	ENSCHOG00000012981	-	58	92.126	Choloepus_hoffmanni
ENSOMEG00000011834	snrnp200	99	90.510	ENSCPBG00000022571	SNRNP200	99	95.000	Chrysemys_picta_bellii
ENSOMEG00000011834	snrnp200	99	75.793	ENSCING00000005082	-	99	75.972	Ciona_intestinalis
ENSOMEG00000011834	snrnp200	94	90.244	ENSCANG00000033932	SNRNP200	99	90.360	Colobus_angolensis_palliatus
ENSOMEG00000011834	snrnp200	99	90.449	ENSCGRG00001022610	Snrnp200	99	90.559	Cricetulus_griseus_chok1gshd
ENSOMEG00000011834	snrnp200	99	89.949	ENSCGRG00000016472	Snrnp200	99	90.056	Cricetulus_griseus_crigri
ENSOMEG00000011834	snrnp200	99	94.939	ENSCSEG00000016399	snrnp200	99	95.061	Cynoglossus_semilaevis
ENSOMEG00000011834	snrnp200	100	91.526	ENSCVAG00000017631	snrnp200	100	91.526	Cyprinodon_variegatus
ENSOMEG00000011834	snrnp200	100	93.633	ENSDARG00000077536	snrnp200	99	93.653	Danio_rerio
ENSOMEG00000011834	snrnp200	99	89.045	ENSDNOG00000011227	SNRNP200	99	89.150	Dasypus_novemcinctus
ENSOMEG00000011834	snrnp200	99	88.037	ENSDORG00000005861	Snrnp200	99	88.139	Dipodomys_ordii
ENSOMEG00000011834	snrnp200	100	73.464	FBgn0263599	l(3)72Ab	99	73.689	Drosophila_melanogaster
ENSOMEG00000011834	snrnp200	95	89.836	ENSETEG00000000162	SNRNP200	74	89.836	Echinops_telfairi
ENSOMEG00000011834	snrnp200	83	80.538	ENSEBUG00000016524	snrnp200	95	80.538	Eptatretus_burgeri
ENSOMEG00000011834	snrnp200	99	89.371	ENSEASG00005001884	SNRNP200	99	89.429	Equus_asinus_asinus
ENSOMEG00000011834	snrnp200	99	90.403	ENSECAG00000019675	SNRNP200	99	90.512	Equus_caballus
ENSOMEG00000011834	snrnp200	88	100.000	ENSEEUG00000012178	SNRNP200	93	100.000	Erinaceus_europaeus
ENSOMEG00000011834	snrnp200	99	95.207	ENSELUG00000018948	snrnp200	99	95.207	Esox_lucius
ENSOMEG00000011834	snrnp200	99	90.449	ENSFCAG00000010699	SNRNP200	99	90.559	Felis_catus
ENSOMEG00000011834	snrnp200	93	85.064	ENSFALG00000001368	-	94	85.114	Ficedula_albicollis
ENSOMEG00000011834	snrnp200	99	90.262	ENSFDAG00000004683	SNRNP200	99	90.371	Fukomys_damarensis
ENSOMEG00000011834	snrnp200	100	93.727	ENSFHEG00000003786	snrnp200	100	93.727	Fundulus_heteroclitus
ENSOMEG00000011834	snrnp200	100	94.065	ENSGMOG00000004881	snrnp200	99	94.040	Gadus_morhua
ENSOMEG00000011834	snrnp200	100	93.867	ENSGAFG00000010807	snrnp200	100	93.867	Gambusia_affinis
ENSOMEG00000011834	snrnp200	100	95.890	ENSGACG00000011474	snrnp200	99	95.919	Gasterosteus_aculeatus
ENSOMEG00000011834	snrnp200	95	90.643	ENSGAGG00000016069	SNRNP200	97	92.857	Gopherus_agassizii
ENSOMEG00000011834	snrnp200	99	90.449	ENSGGOG00000005174	SNRNP200	99	90.559	Gorilla_gorilla
ENSOMEG00000011834	snrnp200	97	93.750	ENSHBUG00000011322	snrnp200	99	93.800	Haplochromis_burtoni
ENSOMEG00000011834	snrnp200	99	90.309	ENSHGLG00000006654	SNRNP200	99	90.418	Heterocephalus_glaber_female
ENSOMEG00000011834	snrnp200	99	90.309	ENSHGLG00100018594	SNRNP200	99	90.418	Heterocephalus_glaber_male
ENSOMEG00000011834	snrnp200	99	90.449	ENSSTOG00000016351	SNRNP200	99	90.559	Ictidomys_tridecemlineatus
ENSOMEG00000011834	snrnp200	99	90.215	ENSJJAG00000023659	Snrnp200	99	90.324	Jaculus_jaculus
ENSOMEG00000011834	snrnp200	100	93.654	ENSKMAG00000003665	snrnp200	100	93.654	Kryptolebias_marmoratus
ENSOMEG00000011834	snrnp200	100	96.629	ENSLBEG00000021585	snrnp200	100	96.629	Labrus_bergylta
ENSOMEG00000011834	snrnp200	82	91.920	ENSLACG00000000226	SNRNP200	99	92.051	Latimeria_chalumnae
ENSOMEG00000011834	snrnp200	100	93.312	ENSLOCG00000015198	snrnp200	99	93.330	Lepisosteus_oculatus
ENSOMEG00000011834	snrnp200	99	90.215	ENSLAFG00000015626	SNRNP200	99	90.324	Loxodonta_africana
ENSOMEG00000011834	snrnp200	99	90.403	ENSMFAG00000040174	SNRNP200	99	91.860	Macaca_fascicularis
ENSOMEG00000011834	snrnp200	99	90.403	ENSMMUG00000023261	SNRNP200	99	90.512	Macaca_mulatta
ENSOMEG00000011834	snrnp200	99	90.356	ENSMNEG00000032398	SNRNP200	99	90.465	Macaca_nemestrina
ENSOMEG00000011834	snrnp200	99	90.449	ENSMLEG00000019083	SNRNP200	99	91.860	Mandrillus_leucophaeus
ENSOMEG00000011834	snrnp200	100	96.069	ENSMAMG00000007851	snrnp200	99	96.147	Mastacembelus_armatus
ENSOMEG00000011834	snrnp200	97	93.750	ENSMZEG00005010787	snrnp200	99	93.800	Maylandia_zebra
ENSOMEG00000011834	snrnp200	97	90.227	ENSMGAG00000001831	SNRNP200	99	90.356	Meleagris_gallopavo
ENSOMEG00000011834	snrnp200	99	90.496	ENSMAUG00000011825	Snrnp200	99	90.606	Mesocricetus_auratus
ENSOMEG00000011834	snrnp200	99	90.496	ENSMICG00000004710	SNRNP200	99	90.606	Microcebus_murinus
ENSOMEG00000011834	snrnp200	99	88.764	ENSMOCG00000011814	Snrnp200	99	88.868	Microtus_ochrogaster
ENSOMEG00000011834	snrnp200	99	94.264	ENSMMOG00000014167	snrnp200	99	94.264	Mola_mola
ENSOMEG00000011834	snrnp200	99	90.356	ENSMODG00000008475	SNRNP200	99	90.418	Monodelphis_domestica
ENSOMEG00000011834	snrnp200	100	96.395	ENSMALG00000001973	snrnp200	100	96.395	Monopterus_albus
ENSOMEG00000011834	snrnp200	99	90.356	MGP_CAROLIEiJ_G0024250	Snrnp200	99	90.465	Mus_caroli
ENSOMEG00000011834	snrnp200	99	90.403	ENSMUSG00000003660	Snrnp200	99	90.512	Mus_musculus
ENSOMEG00000011834	snrnp200	99	90.403	MGP_PahariEiJ_G0025695	Snrnp200	99	90.512	Mus_pahari
ENSOMEG00000011834	snrnp200	98	92.265	MGP_SPRETEiJ_G0025170	Snrnp200	99	92.958	Mus_spretus
ENSOMEG00000011834	snrnp200	99	90.449	ENSMPUG00000008949	SNRNP200	99	90.559	Mustela_putorius_furo
ENSOMEG00000011834	snrnp200	99	90.042	ENSMLUG00000010493	SNRNP200	99	90.150	Myotis_lucifugus
ENSOMEG00000011834	snrnp200	99	87.313	ENSMLUG00000027511	-	99	87.412	Myotis_lucifugus
ENSOMEG00000011834	snrnp200	99	90.449	ENSNGAG00000021993	Snrnp200	99	90.559	Nannospalax_galili
ENSOMEG00000011834	snrnp200	90	96.570	ENSNBRG00000017960	snrnp200	98	96.570	Neolamprologus_brichardi
ENSOMEG00000011834	snrnp200	99	86.332	ENSNLEG00000000025	SNRNP200	99	86.474	Nomascus_leucogenys
ENSOMEG00000011834	snrnp200	99	93.814	ENSMEUG00000010532	SNRNP200	78	92.857	Notamacropus_eugenii
ENSOMEG00000011834	snrnp200	96	89.348	ENSOPRG00000015464	SNRNP200	99	87.271	Ochotona_princeps
ENSOMEG00000011834	snrnp200	99	90.309	ENSODEG00000008366	SNRNP200	99	90.418	Octodon_degus
ENSOMEG00000011834	snrnp200	99	96.145	ENSONIG00000010714	snrnp200	99	96.145	Oreochromis_niloticus
ENSOMEG00000011834	snrnp200	99	90.496	ENSOCUG00000009864	SNRNP200	99	90.606	Oryctolagus_cuniculus
ENSOMEG00000011834	snrnp200	99	99.391	ENSORLG00000012286	snrnp200	100	99.391	Oryzias_latipes
ENSOMEG00000011834	snrnp200	99	99.391	ENSORLG00020004648	snrnp200	100	99.391	Oryzias_latipes_hni
ENSOMEG00000011834	snrnp200	99	99.391	ENSORLG00015019114	snrnp200	100	99.391	Oryzias_latipes_hsok
ENSOMEG00000011834	snrnp200	99	90.496	ENSOGAG00000006879	SNRNP200	99	90.606	Otolemur_garnettii
ENSOMEG00000011834	snrnp200	99	89.424	ENSOARG00000013949	SNRNP200	99	89.531	Ovis_aries
ENSOMEG00000011834	snrnp200	99	90.449	ENSPPAG00000041559	SNRNP200	99	90.559	Pan_paniscus
ENSOMEG00000011834	snrnp200	99	90.449	ENSPPRG00000004435	SNRNP200	99	90.559	Panthera_pardus
ENSOMEG00000011834	snrnp200	99	90.028	ENSPTIG00000006380	SNRNP200	99	90.136	Panthera_tigris_altaica
ENSOMEG00000011834	snrnp200	99	90.449	ENSPTRG00000012230	SNRNP200	99	90.559	Pan_troglodytes
ENSOMEG00000011834	snrnp200	99	90.403	ENSPANG00000006017	SNRNP200	99	90.512	Papio_anubis
ENSOMEG00000011834	snrnp200	100	93.917	ENSPKIG00000014762	snrnp200	99	93.938	Paramormyrops_kingsleyae
ENSOMEG00000011834	snrnp200	99	89.612	ENSPSIG00000008580	SNRNP200	99	89.671	Pelodiscus_sinensis
ENSOMEG00000011834	snrnp200	99	90.262	ENSPCIG00000023050	SNRNP200	99	90.324	Phascolarctos_cinereus
ENSOMEG00000011834	snrnp200	100	96.537	ENSPFOG00000015110	snrnp200	100	96.537	Poecilia_formosa
ENSOMEG00000011834	snrnp200	97	96.755	ENSPLAG00000006711	snrnp200	99	96.755	Poecilia_latipinna
ENSOMEG00000011834	snrnp200	97	96.480	ENSPMEG00000021166	snrnp200	99	96.480	Poecilia_mexicana
ENSOMEG00000011834	snrnp200	100	96.442	ENSPREG00000008875	snrnp200	99	96.521	Poecilia_reticulata
ENSOMEG00000011834	snrnp200	99	90.449	ENSPPYG00000012068	SNRNP200	99	90.559	Pongo_abelii
ENSOMEG00000011834	snrnp200	97	94.231	ENSPCAG00000008536	SNRNP200	85	95.745	Procavia_capensis
ENSOMEG00000011834	snrnp200	99	90.449	ENSPCOG00000024608	SNRNP200	99	90.559	Propithecus_coquereli
ENSOMEG00000011834	snrnp200	96	90.788	ENSPVAG00000005860	SNRNP200	92	91.031	Pteropus_vampyrus
ENSOMEG00000011834	snrnp200	99	91.467	ENSPNYG00000017476	snrnp200	99	91.467	Pundamilia_nyererei
ENSOMEG00000011834	snrnp200	100	89.752	ENSPNAG00000010998	snrnp200	99	89.803	Pygocentrus_nattereri
ENSOMEG00000011834	snrnp200	99	90.496	ENSRNOG00000012157	Snrnp200	99	90.606	Rattus_norvegicus
ENSOMEG00000011834	snrnp200	99	90.449	ENSRBIG00000044690	-	99	90.559	Rhinopithecus_bieti
ENSOMEG00000011834	snrnp200	99	90.449	ENSRROG00000037952	-	99	90.559	Rhinopithecus_roxellana
ENSOMEG00000011834	snrnp200	99	90.449	ENSSBOG00000035471	SNRNP200	99	90.559	Saimiri_boliviensis_boliviensis
ENSOMEG00000011834	snrnp200	97	90.179	ENSSHAG00000000758	SNRNP200	99	90.258	Sarcophilus_harrisii
ENSOMEG00000011834	snrnp200	99	94.126	ENSSFOG00015018826	snrnp200	99	94.126	Scleropages_formosus
ENSOMEG00000011834	snrnp200	100	96.629	ENSSMAG00000005463	snrnp200	100	96.629	Scophthalmus_maximus
ENSOMEG00000011834	snrnp200	100	97.004	ENSSDUG00000021410	snrnp200	100	97.004	Seriola_dumerili
ENSOMEG00000011834	snrnp200	100	96.816	ENSSLDG00000010884	snrnp200	100	96.816	Seriola_lalandi_dorsalis
ENSOMEG00000011834	snrnp200	95	87.668	ENSSARG00000010728	SNRNP200	96	87.668	Sorex_araneus
ENSOMEG00000011834	snrnp200	99	90.684	ENSSPUG00000003726	-	99	90.747	Sphenodon_punctatus
ENSOMEG00000011834	snrnp200	100	97.051	ENSSPAG00000001842	snrnp200	100	97.051	Stegastes_partitus
ENSOMEG00000011834	snrnp200	99	90.449	ENSSSCG00000008127	SNRNP200	99	90.559	Sus_scrofa
ENSOMEG00000011834	snrnp200	99	82.209	ENSTGUG00000014475	-	100	82.209	Taeniopygia_guttata
ENSOMEG00000011834	snrnp200	99	95.581	ENSTRUG00000001307	snrnp200	99	95.581	Takifugu_rubripes
ENSOMEG00000011834	snrnp200	99	90.744	ENSTNIG00000004320	snrnp200	99	83.771	Tetraodon_nigroviridis
ENSOMEG00000011834	snrnp200	82	93.897	ENSTBEG00000003329	-	67	93.897	Tupaia_belangeri
ENSOMEG00000011834	snrnp200	99	90.215	ENSTTRG00000004983	SNRNP200	99	90.324	Tursiops_truncatus
ENSOMEG00000011834	snrnp200	75	82.946	ENSUAMG00000008395	-	95	82.946	Ursus_americanus
ENSOMEG00000011834	snrnp200	99	90.449	ENSUMAG00000012385	SNRNP200	99	90.559	Ursus_maritimus
ENSOMEG00000011834	snrnp200	87	93.966	ENSVPAG00000006434	SNRNP200	66	93.966	Vicugna_pacos
ENSOMEG00000011834	snrnp200	99	90.238	ENSVVUG00000026247	SNRNP200	99	90.359	Vulpes_vulpes
ENSOMEG00000011834	snrnp200	99	90.178	ENSXETG00000001243	snrnp200	99	90.239	Xenopus_tropicalis
ENSOMEG00000011834	snrnp200	97	96.677	ENSXMAG00000002058	snrnp200	98	96.677	Xiphophorus_maculatus