EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000011843 (Gene tree)
Gene ID: 112159234
Gene Symbol: YTHDF1 (1 of many)
Alias: -
Full Name: YTH domain-containing family protein 1-like
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 9122 bases
Position: chrNVQA01000024.1:17498471-17507592
Accession: 112159234
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000010570	YTH	PF04146.15	6.4e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000017426	YTHDF1 (1 of many)-201	5232	-	ENSOMEP00000010570	611 (aa)	XP_024148945	UPI000CF80887

Gene Model

Click here to download ENSOMEG00000011843's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000011843's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000011843	YTHDF1	96	60.539	ENSOMEG00000008212	ythdf3	99	59.872
ENSOMEG00000011843	YTHDF1	99	76.823	ENSOMEG00000002941	YTHDF1	99	76.006
ENSOMEG00000011843	YTHDF1	86	73.859	ENSOMEG00000011398	ythdf2	95	73.859

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000011843	YTHDF1	95	71.307	ENSG00000149658	YTHDF1	100	69.440	Homo_sapiens
ENSOMEG00000011843	YTHDF1	99	76.518	ENSAPOG00000004358	ythdf1	99	77.993	Acanthochromis_polyacanthus
ENSOMEG00000011843	YTHDF1	100	93.193	ENSAPOG00000010796	YTHDF1	100	93.193	Acanthochromis_polyacanthus
ENSOMEG00000011843	YTHDF1	94	84.229	ENSACIG00000020083	YTHDF1	100	84.992	Amphilophus_citrinellus
ENSOMEG00000011843	YTHDF1	94	73.693	ENSACIG00000011264	ythdf1	98	73.754	Amphilophus_citrinellus
ENSOMEG00000011843	YTHDF1	100	93.031	ENSAOCG00000012567	YTHDF1	100	93.031	Amphiprion_ocellaris
ENSOMEG00000011843	YTHDF1	99	76.228	ENSAOCG00000022251	ythdf1	99	78.548	Amphiprion_ocellaris
ENSOMEG00000011843	YTHDF1	100	93.193	ENSAPEG00000008750	YTHDF1	100	93.193	Amphiprion_percula
ENSOMEG00000011843	YTHDF1	99	76.228	ENSAPEG00000021878	ythdf1	99	78.045	Amphiprion_percula
ENSOMEG00000011843	YTHDF1	99	76.252	ENSATEG00000023840	ythdf1	99	77.244	Anabas_testudineus
ENSOMEG00000011843	YTHDF1	100	91.262	ENSATEG00000005996	YTHDF1	100	92.071	Anabas_testudineus
ENSOMEG00000011843	YTHDF1	94	71.012	ENSAPLG00000005985	YTHDF1	99	71.546	Anas_platyrhynchos
ENSOMEG00000011843	YTHDF1	95	73.116	ENSACAG00000005560	YTHDF1	100	72.240	Anolis_carolinensis
ENSOMEG00000011843	YTHDF1	95	70.698	ENSANAG00000034786	-	100	69.741	Aotus_nancymaae
ENSOMEG00000011843	YTHDF1	100	59.150	ENSANAG00000021022	-	100	59.385	Aotus_nancymaae
ENSOMEG00000011843	YTHDF1	100	90.291	ENSACLG00000025518	YTHDF1	100	90.939	Astatotilapia_calliptera
ENSOMEG00000011843	YTHDF1	94	70.890	ENSBTAG00000010383	YTHDF1	100	69.805	Bos_taurus
ENSOMEG00000011843	YTHDF1	95	71.039	ENSCJAG00000010056	YTHDF1	100	69.280	Callithrix_jacchus
ENSOMEG00000011843	YTHDF1	87	67.917	ENSCAFG00000012772	YTHDF1	99	69.611	Canis_familiaris
ENSOMEG00000011843	YTHDF1	87	67.917	ENSCAFG00020001214	YTHDF1	99	69.611	Canis_lupus_dingo
ENSOMEG00000011843	YTHDF1	94	70.619	ENSCHIG00000026494	YTHDF1	100	69.368	Capra_hircus
ENSOMEG00000011843	YTHDF1	95	69.231	ENSTSYG00000033436	YTHDF1	99	69.494	Carlito_syrichta
ENSOMEG00000011843	YTHDF1	95	71.624	ENSCATG00000033272	YTHDF1	100	70.502	Cercocebus_atys
ENSOMEG00000011843	YTHDF1	95	71.259	ENSCLAG00000005989	YTHDF1	100	69.756	Chinchilla_lanigera
ENSOMEG00000011843	YTHDF1	95	71.624	ENSCSAG00000016266	YTHDF1	100	70.502	Chlorocebus_sabaeus
ENSOMEG00000011843	YTHDF1	95	73.469	ENSCPBG00000027183	YTHDF1	100	71.591	Chrysemys_picta_bellii
ENSOMEG00000011843	YTHDF1	94	71.701	ENSCANG00000029082	YTHDF1	98	70.279	Colobus_angolensis_palliatus
ENSOMEG00000011843	YTHDF1	98	71.167	ENSCGRG00001016568	Ythdf1	100	70.617	Cricetulus_griseus_chok1gshd
ENSOMEG00000011843	YTHDF1	93	71.478	ENSCGRG00000009207	Ythdf1	100	70.346	Cricetulus_griseus_crigri
ENSOMEG00000011843	YTHDF1	94	75.773	ENSCSEG00000020623	YTHDF1	99	76.975	Cynoglossus_semilaevis
ENSOMEG00000011843	YTHDF1	99	75.161	ENSCVAG00000017940	ythdf1	99	76.367	Cyprinodon_variegatus
ENSOMEG00000011843	YTHDF1	100	89.789	ENSCVAG00000014378	YTHDF1	100	90.438	Cyprinodon_variegatus
ENSOMEG00000011843	YTHDF1	100	79.777	ENSDARG00000016447	ythdf1	100	81.240	Danio_rerio
ENSOMEG00000011843	YTHDF1	95	71.918	ENSDNOG00000043590	YTHDF1	100	71.220	Dasypus_novemcinctus
ENSOMEG00000011843	YTHDF1	92	68.551	ENSDORG00000002879	Ythdf1	94	68.896	Dipodomys_ordii
ENSOMEG00000011843	YTHDF1	92	50.962	ENSETEG00000017860	-	98	51.572	Echinops_telfairi
ENSOMEG00000011843	YTHDF1	88	71.296	ENSEEUG00000007461	YTHDF1	100	69.352	Erinaceus_europaeus
ENSOMEG00000011843	YTHDF1	99	79.621	ENSELUG00000022768	ythdf1	99	80.095	Esox_lucius
ENSOMEG00000011843	YTHDF1	99	78.681	ENSELUG00000001906	YTHDF1	99	77.187	Esox_lucius
ENSOMEG00000011843	YTHDF1	95	72.913	ENSFALG00000010463	YTHDF1	100	71.591	Ficedula_albicollis
ENSOMEG00000011843	YTHDF1	95	71.233	ENSFDAG00000019602	YTHDF1	100	69.692	Fukomys_damarensis
ENSOMEG00000011843	YTHDF1	99	76.013	ENSFHEG00000023218	ythdf1	99	76.263	Fundulus_heteroclitus
ENSOMEG00000011843	YTHDF1	100	91.100	ENSFHEG00000002540	YTHDF1	100	91.586	Fundulus_heteroclitus
ENSOMEG00000011843	YTHDF1	86	92.344	ENSGMOG00000019610	ythdf1	84	92.344	Gadus_morhua
ENSOMEG00000011843	YTHDF1	95	71.550	ENSGALG00000005745	YTHDF1	100	71.591	Gallus_gallus
ENSOMEG00000011843	YTHDF1	100	92.707	ENSGAFG00000021100	YTHDF1	100	92.707	Gambusia_affinis
ENSOMEG00000011843	YTHDF1	99	86.179	ENSGACG00000002613	YTHDF1	99	85.854	Gasterosteus_aculeatus
ENSOMEG00000011843	YTHDF1	99	76.337	ENSGACG00000012014	ythdf1	99	74.760	Gasterosteus_aculeatus
ENSOMEG00000011843	YTHDF1	95	73.639	ENSGAGG00000003007	YTHDF1	100	71.916	Gopherus_agassizii
ENSOMEG00000011843	YTHDF1	95	71.769	ENSGGOG00000008340	YTHDF1	100	69.760	Gorilla_gorilla
ENSOMEG00000011843	YTHDF1	99	76.861	ENSHBUG00000011284	ythdf1	99	76.987	Haplochromis_burtoni
ENSOMEG00000011843	YTHDF1	100	90.777	ENSHBUG00000004875	YTHDF1	100	91.424	Haplochromis_burtoni
ENSOMEG00000011843	YTHDF1	95	70.890	ENSHGLG00000006585	YTHDF1	100	69.318	Heterocephalus_glaber_female
ENSOMEG00000011843	YTHDF1	95	70.890	ENSHGLG00100004683	YTHDF1	100	69.318	Heterocephalus_glaber_male
ENSOMEG00000011843	YTHDF1	100	87.175	ENSHCOG00000011303	YTHDF1	100	87.175	Hippocampus_comes
ENSOMEG00000011843	YTHDF1	96	75.374	ENSHCOG00000008866	ythdf1	99	75.618	Hippocampus_comes
ENSOMEG00000011843	YTHDF1	100	79.073	ENSIPUG00000000425	Ythdf1	100	79.126	Ictalurus_punctatus
ENSOMEG00000011843	YTHDF1	94	71.577	ENSJJAG00000013589	Ythdf1	100	70.230	Jaculus_jaculus
ENSOMEG00000011843	YTHDF1	100	93.485	ENSKMAG00000017472	YTHDF1	100	93.648	Kryptolebias_marmoratus
ENSOMEG00000011843	YTHDF1	99	76.490	ENSKMAG00000005595	ythdf1	99	75.523	Kryptolebias_marmoratus
ENSOMEG00000011843	YTHDF1	100	91.086	ENSLBEG00000012068	YTHDF1	100	90.924	Labrus_bergylta
ENSOMEG00000011843	YTHDF1	99	76.661	ENSLBEG00000014105	ythdf1	99	77.295	Labrus_bergylta
ENSOMEG00000011843	YTHDF1	94	72.569	ENSLACG00000014195	YTHDF1	98	73.575	Latimeria_chalumnae
ENSOMEG00000011843	YTHDF1	100	78.699	ENSLOCG00000005020	ythdf1	100	78.537	Lepisosteus_oculatus
ENSOMEG00000011843	YTHDF1	95	72.743	ENSLAFG00000008884	YTHDF1	100	70.340	Loxodonta_africana
ENSOMEG00000011843	YTHDF1	95	71.624	ENSMFAG00000042868	YTHDF1	100	70.502	Macaca_fascicularis
ENSOMEG00000011843	YTHDF1	95	71.624	ENSMMUG00000009227	YTHDF1	100	70.502	Macaca_mulatta
ENSOMEG00000011843	YTHDF1	95	71.624	ENSMNEG00000030851	YTHDF1	100	70.502	Macaca_nemestrina
ENSOMEG00000011843	YTHDF1	95	71.795	ENSMLEG00000009252	YTHDF1	100	70.395	Mandrillus_leucophaeus
ENSOMEG00000011843	YTHDF1	100	90.777	ENSMAMG00000011072	YTHDF1	100	91.586	Mastacembelus_armatus
ENSOMEG00000011843	YTHDF1	99	74.679	ENSMAMG00000024255	ythdf1	99	75.602	Mastacembelus_armatus
ENSOMEG00000011843	YTHDF1	99	77.060	ENSMZEG00005026397	ythdf1	99	78.045	Maylandia_zebra
ENSOMEG00000011843	YTHDF1	100	90.777	ENSMZEG00005023596	YTHDF1	100	91.424	Maylandia_zebra
ENSOMEG00000011843	YTHDF1	95	71.282	ENSMGAG00000006139	YTHDF1	99	71.382	Meleagris_gallopavo
ENSOMEG00000011843	YTHDF1	95	71.575	ENSMAUG00000017660	Ythdf1	100	70.455	Mesocricetus_auratus
ENSOMEG00000011843	YTHDF1	95	71.672	ENSMICG00000032266	YTHDF1	100	69.854	Microcebus_murinus
ENSOMEG00000011843	YTHDF1	95	71.233	ENSMOCG00000013573	Ythdf1	100	70.455	Microtus_ochrogaster
ENSOMEG00000011843	YTHDF1	94	75.465	ENSMMOG00000017500	ythdf1	97	76.080	Mola_mola
ENSOMEG00000011843	YTHDF1	99	90.359	ENSMMOG00000020467	YTHDF1	99	90.850	Mola_mola
ENSOMEG00000011843	YTHDF1	87	72.608	ENSMODG00000016842	YTHDF1	100	71.327	Monodelphis_domestica
ENSOMEG00000011843	YTHDF1	99	75.000	ENSMALG00000015672	ythdf1	99	75.911	Monopterus_albus
ENSOMEG00000011843	YTHDF1	100	91.057	ENSMALG00000022209	YTHDF1	100	91.057	Monopterus_albus
ENSOMEG00000011843	YTHDF1	95	71.575	MGP_CAROLIEiJ_G0024790	Ythdf1	100	70.292	Mus_caroli
ENSOMEG00000011843	YTHDF1	95	71.575	ENSMUSG00000038848	Ythdf1	100	70.292	Mus_musculus
ENSOMEG00000011843	YTHDF1	95	71.575	MGP_PahariEiJ_G0026237	Ythdf1	100	70.292	Mus_pahari
ENSOMEG00000011843	YTHDF1	95	71.575	MGP_SPRETEiJ_G0025715	Ythdf1	100	70.292	Mus_spretus
ENSOMEG00000011843	YTHDF1	87	68.113	ENSMPUG00000008111	YTHDF1	100	67.365	Mustela_putorius_furo
ENSOMEG00000011843	YTHDF1	93	72.648	ENSMLUG00000002241	YTHDF1	96	69.587	Myotis_lucifugus
ENSOMEG00000011843	YTHDF1	95	72.061	ENSNGAG00000000334	Ythdf1	100	70.894	Nannospalax_galili
ENSOMEG00000011843	YTHDF1	94	90.909	ENSNBRG00000015321	YTHDF1	99	91.611	Neolamprologus_brichardi
ENSOMEG00000011843	YTHDF1	94	77.157	ENSNBRG00000008213	ythdf1	98	77.575	Neolamprologus_brichardi
ENSOMEG00000011843	YTHDF1	93	65.210	ENSOPRG00000001758	-	99	65.271	Ochotona_princeps
ENSOMEG00000011843	YTHDF1	94	55.172	ENSODEG00000000074	-	100	57.886	Octodon_degus
ENSOMEG00000011843	YTHDF1	94	76.871	ENSONIG00000016799	ythdf1	99	77.076	Oreochromis_niloticus
ENSOMEG00000011843	YTHDF1	95	72.743	ENSOANG00000003723	YTHDF1	100	72.078	Ornithorhynchus_anatinus
ENSOMEG00000011843	YTHDF1	99	75.684	ENSORLG00000014665	YTHDF1	99	73.997	Oryzias_latipes
ENSOMEG00000011843	YTHDF1	100	97.712	ENSORLG00000009739	YTHDF1	100	97.712	Oryzias_latipes
ENSOMEG00000011843	YTHDF1	100	96.732	ENSORLG00020001332	YTHDF1	100	96.732	Oryzias_latipes_hni
ENSOMEG00000011843	YTHDF1	99	76.129	ENSORLG00020000307	ythdf1	99	74.437	Oryzias_latipes_hni
ENSOMEG00000011843	YTHDF1	100	97.386	ENSORLG00015018321	YTHDF1	100	97.386	Oryzias_latipes_hsok
ENSOMEG00000011843	YTHDF1	99	75.968	ENSORLG00015006302	ythdf1	99	74.277	Oryzias_latipes_hsok
ENSOMEG00000011843	YTHDF1	95	70.256	ENSOGAG00000000480	YTHDF1	100	69.579	Otolemur_garnettii
ENSOMEG00000011843	YTHDF1	75	88.136	ENSOARG00000011639	YTHDF1	89	81.604	Ovis_aries
ENSOMEG00000011843	YTHDF1	95	71.769	ENSPPAG00000023277	YTHDF1	100	69.692	Pan_paniscus
ENSOMEG00000011843	YTHDF1	78	79.476	ENSPTIG00000017355	YTHDF1	97	77.559	Panthera_tigris_altaica
ENSOMEG00000011843	YTHDF1	95	71.769	ENSPTRG00000013730	YTHDF1	100	69.760	Pan_troglodytes
ENSOMEG00000011843	YTHDF1	95	71.624	ENSPANG00000021472	YTHDF1	100	70.502	Papio_anubis
ENSOMEG00000011843	YTHDF1	97	74.454	ENSPKIG00000005026	YTHDF1	99	73.950	Paramormyrops_kingsleyae
ENSOMEG00000011843	YTHDF1	95	72.034	ENSPSIG00000005529	YTHDF1	98	72.572	Pelodiscus_sinensis
ENSOMEG00000011843	YTHDF1	91	76.855	ENSPMGG00000015328	ythdf1	97	77.241	Periophthalmus_magnuspinnatus
ENSOMEG00000011843	YTHDF1	92	89.261	ENSPMGG00000009101	YTHDF1	99	85.572	Periophthalmus_magnuspinnatus
ENSOMEG00000011843	YTHDF1	93	71.826	ENSPEMG00000020199	Ythdf1	99	71.875	Peromyscus_maniculatus_bairdii
ENSOMEG00000011843	YTHDF1	97	72.896	ENSPCIG00000017170	YTHDF1	100	71.504	Phascolarctos_cinereus
ENSOMEG00000011843	YTHDF1	99	75.962	ENSPFOG00000005405	ythdf1	99	76.375	Poecilia_formosa
ENSOMEG00000011843	YTHDF1	100	92.869	ENSPLAG00000006298	YTHDF1	100	92.869	Poecilia_latipinna
ENSOMEG00000011843	YTHDF1	99	75.962	ENSPLAG00000006653	ythdf1	99	77.104	Poecilia_latipinna
ENSOMEG00000011843	YTHDF1	99	75.606	ENSPMEG00000023753	ythdf1	99	76.807	Poecilia_mexicana
ENSOMEG00000011843	YTHDF1	100	92.707	ENSPMEG00000020969	-	100	92.707	Poecilia_mexicana
ENSOMEG00000011843	YTHDF1	97	92.167	ENSPREG00000017662	YTHDF1	98	92.167	Poecilia_reticulata
ENSOMEG00000011843	YTHDF1	99	76.375	ENSPREG00000002173	ythdf1	99	77.273	Poecilia_reticulata
ENSOMEG00000011843	YTHDF1	80	84.925	ENSPPYG00000011226	YTHDF1	100	84.038	Pongo_abelii
ENSOMEG00000011843	YTHDF1	87	69.703	ENSPCAG00000002452	YTHDF1	100	69.091	Procavia_capensis
ENSOMEG00000011843	YTHDF1	95	72.089	ENSPCOG00000025969	YTHDF1	100	70.178	Propithecus_coquereli
ENSOMEG00000011843	YTHDF1	96	65.874	ENSPVAG00000017568	YTHDF1	99	66.835	Pteropus_vampyrus
ENSOMEG00000011843	YTHDF1	99	76.861	ENSPNYG00000014007	ythdf1	99	77.181	Pundamilia_nyererei
ENSOMEG00000011843	YTHDF1	100	90.777	ENSPNYG00000002266	YTHDF1	100	91.424	Pundamilia_nyererei
ENSOMEG00000011843	YTHDF1	100	80.195	ENSPNAG00000012447	ythdf1	100	81.180	Pygocentrus_nattereri
ENSOMEG00000011843	YTHDF1	95	71.210	ENSRNOG00000027015	Ythdf1	100	70.292	Rattus_norvegicus
ENSOMEG00000011843	YTHDF1	95	70.769	ENSRBIG00000044959	YTHDF1	100	69.692	Rhinopithecus_bieti
ENSOMEG00000011843	YTHDF1	95	70.769	ENSRROG00000033014	YTHDF1	100	69.692	Rhinopithecus_roxellana
ENSOMEG00000011843	YTHDF1	92	70.370	ENSSBOG00000027278	YTHDF1	100	68.673	Saimiri_boliviensis_boliviensis
ENSOMEG00000011843	YTHDF1	94	71.429	ENSSHAG00000010430	YTHDF1	89	71.242	Sarcophilus_harrisii
ENSOMEG00000011843	YTHDF1	100	78.431	ENSSFOG00015000284	ythdf1	100	78.571	Scleropages_formosus
ENSOMEG00000011843	YTHDF1	67	91.083	ENSSMAG00000013715	ythdf1	91	86.034	Scophthalmus_maximus
ENSOMEG00000011843	YTHDF1	99	88.119	ENSSMAG00000007635	YTHDF1	100	86.350	Scophthalmus_maximus
ENSOMEG00000011843	YTHDF1	99	76.699	ENSSDUG00000000435	ythdf1	99	77.338	Seriola_dumerili
ENSOMEG00000011843	YTHDF1	100	88.644	ENSSDUG00000015823	YTHDF1	100	88.959	Seriola_dumerili
ENSOMEG00000011843	YTHDF1	99	76.167	ENSSLDG00000024948	ythdf1	99	77.266	Seriola_lalandi_dorsalis
ENSOMEG00000011843	YTHDF1	100	89.490	ENSSLDG00000001054	YTHDF1	100	89.809	Seriola_lalandi_dorsalis
ENSOMEG00000011843	YTHDF1	100	92.395	ENSSPAG00000003666	YTHDF1	100	92.395	Stegastes_partitus
ENSOMEG00000011843	YTHDF1	99	74.960	ENSSPAG00000014989	ythdf1	99	77.229	Stegastes_partitus
ENSOMEG00000011843	YTHDF1	94	71.848	ENSTGUG00000007565	YTHDF1	100	71.546	Taeniopygia_guttata
ENSOMEG00000011843	YTHDF1	94	76.102	ENSTRUG00000004288	ythdf1	99	77.000	Takifugu_rubripes
ENSOMEG00000011843	YTHDF1	94	89.060	ENSTRUG00000005049	YTHDF1	100	88.538	Takifugu_rubripes
ENSOMEG00000011843	YTHDF1	94	74.871	ENSTNIG00000012490	ythdf1	99	75.042	Tetraodon_nigroviridis
ENSOMEG00000011843	YTHDF1	94	82.149	ENSTNIG00000003975	YTHDF1	100	78.956	Tetraodon_nigroviridis
ENSOMEG00000011843	YTHDF1	87	67.917	ENSVVUG00000015275	YTHDF1	99	69.611	Vulpes_vulpes
ENSOMEG00000011843	YTHDF1	96	71.572	ENSXETG00000027086	ythdf1	98	73.077	Xenopus_tropicalis
ENSOMEG00000011843	YTHDF1	98	91.708	ENSXCOG00000008115	YTHDF1	99	91.708	Xiphophorus_couchianus
ENSOMEG00000011843	YTHDF1	94	76.684	ENSXCOG00000002490	ythdf1	94	77.163	Xiphophorus_couchianus
ENSOMEG00000011843	YTHDF1	99	76.861	ENSXMAG00000008525	ythdf1	99	76.823	Xiphophorus_maculatus
ENSOMEG00000011843	YTHDF1	100	92.545	ENSXMAG00000015644	YTHDF1	100	92.545	Xiphophorus_maculatus