EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSOMEG00000011949 (Gene tree)
Gene ID
112140487
Gene Symbol
plecb
Alias
-
Full Name
plectin
Gene Type
protein_coding
Species
Oryzias_melastigma
Status
putative
Strand
Plus strand
Length
88332 bases
Position
chrNVQA01004962.1:42520-130851
Accession
112140487
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSOMEP00000028535S10_plectinPF03501.154.6e-3811
ENSOMEP00000010449S10_plectinPF03501.154.6e-3811
ENSOMEP00000010526S10_plectinPF03501.154.6e-3811
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSOMET00000017263-17177XM_024263446ENSOMEP000000104495563 (aa)XP_024119214-
ENSOMET00000017194-17162XM_024263449ENSOMEP000000285355558 (aa)XP_024119217-
ENSOMET00000016968-13254-ENSOMEP000000284214417 (aa)--
ENSOMET00000032008-13782-ENSOMEP000000287094502 (aa)--
ENSOMET00000017429-17192-ENSOMEP000000105265568 (aa)--
ENSOMET00000031818-13932XM_024263455ENSOMEP000000102674515 (aa)XP_024119223UPI000CF80C91
ENSOMET00000031851-13862-ENSOMEP000000103354487 (aa)--
ENSOMET00000017707-14105-ENSOMEP000000286604500 (aa)--
Gene Model
Click here to download ENSOMEG00000011949's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000011949's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSOMEG00000011949plecb9976.767ENSATEG00000024559plecb9976.945Anabas_testudineus
ENSOMEG00000011949plecb10078.929ENSACLG00000022613plecb10078.946Astatotilapia_calliptera
ENSOMEG00000011949plecb9983.398ENSCVAG00000013972plecb9882.123Cyprinodon_variegatus
ENSOMEG00000011949plecb8876.000ENSELUG00000020803plecb8775.817Esox_lucius
ENSOMEG00000011949plecb8379.495ENSGMOG00000006545plecb9979.482Gadus_morhua
ENSOMEG00000011949plecb8384.024ENSGACG00000005431plecb9984.168Gasterosteus_aculeatus
ENSOMEG00000011949plecb9073.485ENSIPUG00000020055plecb8673.993Ictalurus_punctatus
ENSOMEG00000011949plecb8386.128ENSKMAG00000003609plecb9986.151Kryptolebias_marmoratus
ENSOMEG00000011949plecb9977.984ENSLBEG00000004779plecb9580.105Labrus_bergylta
ENSOMEG00000011949plecb8370.967ENSONIG00000013803pleca9970.945Oreochromis_niloticus
ENSOMEG00000011949plecb10091.206ENSORLG00000023311plecb10091.098Oryzias_latipes
ENSOMEG00000011949plecb10091.170ENSORLG00020001716plecb10091.098Oryzias_latipes_hni
ENSOMEG00000011949plecb10091.170ENSORLG00015017959plecb10091.062Oryzias_latipes_hsok
ENSOMEG00000011949plecb8372.279ENSPKIG00000014989pleca8972.342Paramormyrops_kingsleyae
ENSOMEG00000011949plecb9978.561ENSPMEG00000014762plecb10078.554Poecilia_mexicana
ENSOMEG00000011949plecb9978.071ENSPREG00000014625plecb10078.108Poecilia_reticulata
ENSOMEG00000011949plecb9075.642ENSPNAG00000001581plecb8575.461Pygocentrus_nattereri
ENSOMEG00000011949plecb9980.703ENSSMAG00000007821plecb9977.323Scophthalmus_maximus
ENSOMEG00000011949plecb9975.237ENSTRUG00000003715plecb9975.080Takifugu_rubripes

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