EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOMEG00000012014 (Gene tree)
Gene ID: 112144484
Gene Symbol: snrpc
Alias: -
Full Name: small nuclear ribonucleoprotein polypeptide C
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 7652 bases
Position: chrNVQA01000009.1:17685736-17693387
Accession: ZDB-GENE-020419-26
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000028769	zf-U1	PF06220.12	1e-22	1	1
ENSOMEP00000028759	zf-U1	PF06220.12	2.2e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000017599	-	989	-	ENSOMEP00000028759	174 (aa)	-	-
ENSOMET00000017618	-	611	-	ENSOMEP00000028769	161 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000012014's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000012014's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000012014	snrpc	69	97.297	ENSAPOG00000013907	snrpc	75	97.297	Acanthochromis_polyacanthus
ENSOMEG00000012014	snrpc	69	97.297	ENSAOCG00000021151	snrpc	75	97.297	Amphiprion_ocellaris
ENSOMEG00000012014	snrpc	69	97.297	ENSAPEG00000023221	snrpc	75	97.297	Amphiprion_percula
ENSOMEG00000012014	snrpc	69	97.297	ENSATEG00000025133	snrpc	75	97.297	Anabas_testudineus
ENSOMEG00000012014	snrpc	86	77.987	ENSANAG00000019157	-	66	80.000	Aotus_nancymaae
ENSOMEG00000012014	snrpc	86	67.296	ENSANAG00000021026	-	100	64.000	Aotus_nancymaae
ENSOMEG00000012014	snrpc	69	98.198	ENSACLG00000000843	snrpc	74	98.198	Astatotilapia_calliptera
ENSOMEG00000012014	snrpc	86	83.125	ENSAMXG00000032641	snrpc	65	88.235	Astyanax_mexicanus
ENSOMEG00000012014	snrpc	76	76.761	ENSCAPG00000005161	SNRPC	62	78.409	Cavia_aperea
ENSOMEG00000012014	snrpc	86	70.440	ENSCHOG00000011439	SNRPC	58	69.903	Choloepus_hoffmanni
ENSOMEG00000012014	snrpc	73	52.756	ENSCING00000021229	ci-zf(matrin)-4	51	85.484	Ciona_intestinalis
ENSOMEG00000012014	snrpc	76	76.761	ENSCANG00000028035	SNRPC	51	78.409	Colobus_angolensis_palliatus
ENSOMEG00000012014	snrpc	86	67.500	ENSCGRG00001021483	-	63	69.474	Cricetulus_griseus_chok1gshd
ENSOMEG00000012014	snrpc	86	95.302	ENSCVAG00000014297	snrpc	100	95.302	Cyprinodon_variegatus
ENSOMEG00000012014	snrpc	86	83.750	ENSDARG00000009871	snrpc	75	88.235	Danio_rerio
ENSOMEG00000012014	snrpc	85	68.987	ENSEEUG00000014633	SNRPC	67	67.797	Erinaceus_europaeus
ENSOMEG00000012014	snrpc	68	99.091	ENSFHEG00000016667	snrpc	98	99.091	Fundulus_heteroclitus
ENSOMEG00000012014	snrpc	66	98.131	ENSGMOG00000000090	snrpc	74	98.131	Gadus_morhua
ENSOMEG00000012014	snrpc	86	78.750	ENSGALG00000002773	SNRPC	66	80.189	Gallus_gallus
ENSOMEG00000012014	snrpc	86	95.302	ENSGAFG00000016115	snrpc	100	95.302	Gambusia_affinis
ENSOMEG00000012014	snrpc	68	96.330	ENSGACG00000004899	snrpc	73	96.330	Gasterosteus_aculeatus
ENSOMEG00000012014	snrpc	69	98.198	ENSHBUG00000011637	snrpc	74	98.198	Haplochromis_burtoni
ENSOMEG00000012014	snrpc	86	75.658	ENSHGLG00000017741	-	64	75.510	Heterocephalus_glaber_female
ENSOMEG00000012014	snrpc	86	75.658	ENSHGLG00100010786	-	64	75.510	Heterocephalus_glaber_male
ENSOMEG00000012014	snrpc	86	87.919	ENSHCOG00000001596	snrpc	57	96.429	Hippocampus_comes
ENSOMEG00000012014	snrpc	86	85.000	ENSIPUG00000024851	snrpc	75	88.235	Ictalurus_punctatus
ENSOMEG00000012014	snrpc	86	95.973	ENSKMAG00000016356	snrpc	100	95.973	Kryptolebias_marmoratus
ENSOMEG00000012014	snrpc	69	97.297	ENSLBEG00000023881	snrpc	74	97.297	Labrus_bergylta
ENSOMEG00000012014	snrpc	76	76.761	ENSMFAG00000031764	-	51	78.409	Macaca_fascicularis
ENSOMEG00000012014	snrpc	91	56.522	ENSMLEG00000039724	-	92	50.909	Mandrillus_leucophaeus
ENSOMEG00000012014	snrpc	69	97.297	ENSMAMG00000003857	snrpc	75	97.297	Mastacembelus_armatus
ENSOMEG00000012014	snrpc	69	98.198	ENSMZEG00005002199	snrpc	74	98.198	Maylandia_zebra
ENSOMEG00000012014	snrpc	84	94.521	ENSMMOG00000013149	snrpc	100	94.521	Mola_mola
ENSOMEG00000012014	snrpc	86	93.289	ENSMALG00000001197	snrpc	74	98.165	Monopterus_albus
ENSOMEG00000012014	snrpc	76	75.524	ENSMUSG00000024217	Snrpc	56	77.273	Mus_musculus
ENSOMEG00000012014	snrpc	76	77.465	ENSMEUG00000009300	SNRPC	62	78.409	Notamacropus_eugenii
ENSOMEG00000012014	snrpc	69	98.198	ENSONIG00000014757	snrpc	74	98.198	Oreochromis_niloticus
ENSOMEG00000012014	snrpc	76	74.830	ENSOANG00000003405	SNRPC	62	75.000	Ornithorhynchus_anatinus
ENSOMEG00000012014	snrpc	82	99.301	ENSORLG00000007308	snrpc	97	99.301	Oryzias_latipes
ENSOMEG00000012014	snrpc	82	100.000	ENSORLG00020012607	SNRPC	97	100.000	Oryzias_latipes_hni
ENSOMEG00000012014	snrpc	67	88.136	ENSPKIG00000003136	snrpc	76	88.136	Paramormyrops_kingsleyae
ENSOMEG00000012014	snrpc	65	97.143	ENSPMGG00000022162	snrpc	73	97.143	Periophthalmus_magnuspinnatus
ENSOMEG00000012014	snrpc	86	95.302	ENSPFOG00000015174	snrpc	100	95.302	Poecilia_formosa
ENSOMEG00000012014	snrpc	86	95.302	ENSPLAG00000012311	snrpc	100	95.302	Poecilia_latipinna
ENSOMEG00000012014	snrpc	86	95.302	ENSPMEG00000010274	snrpc	100	95.302	Poecilia_mexicana
ENSOMEG00000012014	snrpc	72	72.800	ENSPNYG00000004900	snrpc	68	80.000	Pundamilia_nyererei
ENSOMEG00000012014	snrpc	86	81.875	ENSPNAG00000012799	snrpc	75	88.235	Pygocentrus_nattereri
ENSOMEG00000012014	snrpc	81	63.576	ENSSBOG00000032361	-	64	62.857	Saimiri_boliviensis_boliviensis
ENSOMEG00000012014	snrpc	69	97.297	ENSSMAG00000008029	snrpc	75	97.297	Scophthalmus_maximus
ENSOMEG00000012014	snrpc	69	97.297	ENSSDUG00000018895	snrpc	61	97.297	Seriola_dumerili
ENSOMEG00000012014	snrpc	69	97.297	ENSSLDG00000005034	snrpc	75	97.297	Seriola_lalandi_dorsalis
ENSOMEG00000012014	snrpc	69	97.297	ENSSPAG00000000914	snrpc	75	97.297	Stegastes_partitus
ENSOMEG00000012014	snrpc	86	88.591	ENSTRUG00000021651	snrpc	75	95.495	Takifugu_rubripes
ENSOMEG00000012014	snrpc	86	76.398	ENSTNIG00000018307	snrpc	75	86.777	Tetraodon_nigroviridis
ENSOMEG00000012014	snrpc	86	95.302	ENSXMAG00000017935	snrpc	100	95.302	Xiphophorus_maculatus