EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000012020 (Gene tree)
Gene ID: 112154548
Gene Symbol: -
Alias: -
Full Name: secretion associated Ras related GTPase 1A
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 4871 bases
Position: chrNVQA01000018.1:10237836-10242706
Accession: 112154548
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000010725	MMR_HSR1	PF01926.23	1.9e-05	1	1
ENSOMEP00000028767	MMR_HSR1	PF01926.23	2.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000017609	-	2303	XM_024285571	ENSOMEP00000010725	198 (aa)	XP_024141338	UPI000CF7F13B
ENSOMET00000017623	-	2855	-	ENSOMEP00000028767	228 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000012020's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000012020's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000012020	-	100	85.859	ENSOMEG00000001052	sar1b	100	85.859
ENSOMEG00000012020	-	72	32.394	ENSOMEG00000017070	-	78	32.394
ENSOMEG00000012020	-	89	30.000	ENSOMEG00000023152	-	86	30.000
ENSOMEG00000012020	-	64	35.156	ENSOMEG00000001959	arl8ba	69	35.156
ENSOMEG00000012020	-	72	33.784	ENSOMEG00000007253	arl4cb	74	33.784
ENSOMEG00000012020	-	64	34.375	ENSOMEG00000023857	arl8bb	73	34.375
ENSOMEG00000012020	-	100	81.313	ENSOMEG00000004948	sar1ab	100	81.313
ENSOMEG00000012020	-	62	34.921	ENSOMEG00000016904	arl14	69	34.921
ENSOMEG00000012020	-	77	33.333	ENSOMEG00000023727	ARL10	64	33.333
ENSOMEG00000012020	-	62	35.433	ENSOMEG00000004308	arl4d	63	35.433
ENSOMEG00000012020	-	87	30.636	ENSOMEG00000000211	-	58	30.636
ENSOMEG00000012020	-	72	32.394	ENSOMEG00000009575	arf3b	78	32.394
ENSOMEG00000012020	-	92	32.240	ENSOMEG00000008521	arl2	93	32.240
ENSOMEG00000012020	-	94	31.053	ENSOMEG00000017204	ARL6	96	31.053
ENSOMEG00000012020	-	64	37.008	ENSOMEG00000010187	arl13b	53	36.641
ENSOMEG00000012020	-	61	39.024	ENSOMEG00000022678	-	74	39.024
ENSOMEG00000012020	-	94	30.319	ENSOMEG00000023784	-	97	30.319
ENSOMEG00000012020	-	87	30.233	ENSOMEG00000020821	ARF5	89	30.233
ENSOMEG00000012020	-	89	31.073	ENSOMEG00000023497	arl1	88	31.073
ENSOMEG00000012020	-	86	30.337	ENSOMEG00000001352	arfrp1	84	30.337
ENSOMEG00000012020	-	69	35.915	ENSOMEG00000005057	arl3l2	74	35.915
ENSOMEG00000012020	-	91	30.978	ENSOMEG00000007598	-	96	30.978
ENSOMEG00000012020	-	59	34.188	ENSOMEG00000007419	arl11	64	34.483

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000012020	-	100	79.798	ENSACIG00000019827	sar1ab	100	79.798	Amphilophus_citrinellus
ENSOMEG00000012020	-	100	80.303	ENSAOCG00000022062	sar1ab	100	80.303	Amphiprion_ocellaris
ENSOMEG00000012020	-	100	80.303	ENSAPEG00000011525	sar1ab	100	80.303	Amphiprion_percula
ENSOMEG00000012020	-	100	83.333	ENSATEG00000003466	sar1ab	100	83.333	Anabas_testudineus
ENSOMEG00000012020	-	100	77.778	ENSACLG00000013053	sar1ab	100	77.778	Astatotilapia_calliptera
ENSOMEG00000012020	-	100	82.323	ENSCSEG00000004825	sar1ab	100	82.323	Cynoglossus_semilaevis
ENSOMEG00000012020	-	100	80.303	ENSCVAG00000015162	sar1ab	100	80.303	Cyprinodon_variegatus
ENSOMEG00000012020	-	100	87.879	ENSCVAG00000006500	-	100	87.879	Cyprinodon_variegatus
ENSOMEG00000012020	-	100	83.333	ENSDARG00000033320	sar1ab	100	83.333	Danio_rerio
ENSOMEG00000012020	-	100	82.323	ENSELUG00000024279	sar1ab	100	82.323	Esox_lucius
ENSOMEG00000012020	-	100	90.404	ENSELUG00000013652	sar1a	100	90.404	Esox_lucius
ENSOMEG00000012020	-	100	88.384	ENSFHEG00000012352	-	100	88.384	Fundulus_heteroclitus
ENSOMEG00000012020	-	100	79.293	ENSFHEG00000021773	sar1ab	100	79.293	Fundulus_heteroclitus
ENSOMEG00000012020	-	100	79.293	ENSGMOG00000012588	sar1ab	100	79.293	Gadus_morhua
ENSOMEG00000012020	-	100	79.798	ENSGAFG00000009702	sar1ab	100	79.798	Gambusia_affinis
ENSOMEG00000012020	-	100	88.889	ENSGAFG00000004846	-	100	88.889	Gambusia_affinis
ENSOMEG00000012020	-	100	83.333	ENSGACG00000008616	sar1ab	100	83.333	Gasterosteus_aculeatus
ENSOMEG00000012020	-	100	78.283	ENSHBUG00000021221	sar1ab	100	78.283	Haplochromis_burtoni
ENSOMEG00000012020	-	100	82.323	ENSHCOG00000002845	sar1ab	80	82.323	Hippocampus_comes
ENSOMEG00000012020	-	100	79.798	ENSKMAG00000018006	sar1ab	100	79.798	Kryptolebias_marmoratus
ENSOMEG00000012020	-	100	82.828	ENSLBEG00000001114	sar1ab	100	82.828	Labrus_bergylta
ENSOMEG00000012020	-	100	82.828	ENSMAMG00000021314	sar1ab	100	82.828	Mastacembelus_armatus
ENSOMEG00000012020	-	100	77.778	ENSMZEG00005027606	sar1ab	100	77.778	Maylandia_zebra
ENSOMEG00000012020	-	100	82.828	ENSMMOG00000010360	sar1ab	100	82.828	Mola_mola
ENSOMEG00000012020	-	100	82.828	ENSMALG00000005831	sar1ab	100	82.828	Monopterus_albus
ENSOMEG00000012020	-	100	78.283	ENSNBRG00000018772	sar1ab	100	78.283	Neolamprologus_brichardi
ENSOMEG00000012020	-	100	79.293	ENSONIG00000018509	sar1ab	100	79.293	Oreochromis_niloticus
ENSOMEG00000012020	-	100	81.313	ENSORLG00000006779	sar1ab	68	81.000	Oryzias_latipes
ENSOMEG00000012020	-	100	99.495	ENSORLG00000009132	-	96	98.113	Oryzias_latipes
ENSOMEG00000012020	-	100	99.495	ENSORLG00020007024	-	96	98.113	Oryzias_latipes_hni
ENSOMEG00000012020	-	100	81.818	ENSORLG00020005458	sar1ab	100	81.818	Oryzias_latipes_hni
ENSOMEG00000012020	-	100	81.313	ENSORLG00015010542	sar1ab	100	81.313	Oryzias_latipes_hsok
ENSOMEG00000012020	-	100	98.990	ENSORLG00015006223	-	96	97.642	Oryzias_latipes_hsok
ENSOMEG00000012020	-	100	84.343	ENSPKIG00000007615	sar1ab	100	84.343	Paramormyrops_kingsleyae
ENSOMEG00000012020	-	100	83.838	ENSPMGG00000013330	sar1ab	100	83.838	Periophthalmus_magnuspinnatus
ENSOMEG00000012020	-	100	80.808	ENSPFOG00000023432	sar1ab	100	80.808	Poecilia_formosa
ENSOMEG00000012020	-	100	80.808	ENSPLAG00000023705	sar1ab	100	80.808	Poecilia_latipinna
ENSOMEG00000012020	-	100	87.879	ENSPMEG00000001717	-	100	87.879	Poecilia_mexicana
ENSOMEG00000012020	-	100	80.808	ENSPMEG00000000559	sar1ab	100	80.808	Poecilia_mexicana
ENSOMEG00000012020	-	100	80.808	ENSPREG00000016098	sar1ab	100	80.808	Poecilia_reticulata
ENSOMEG00000012020	-	100	78.283	ENSPNYG00000011603	sar1ab	100	78.283	Pundamilia_nyererei
ENSOMEG00000012020	-	100	82.828	ENSPNAG00000008007	sar1ab	100	82.828	Pygocentrus_nattereri
ENSOMEG00000012020	-	100	88.384	ENSSFOG00015014010	sar1a	100	88.384	Scleropages_formosus
ENSOMEG00000012020	-	56	88.288	ENSSMAG00000020758	sar1ab	80	88.288	Scophthalmus_maximus
ENSOMEG00000012020	-	100	82.323	ENSSDUG00000010773	sar1ab	100	82.323	Seriola_dumerili
ENSOMEG00000012020	-	100	82.323	ENSSLDG00000025558	sar1ab	100	82.323	Seriola_lalandi_dorsalis
ENSOMEG00000012020	-	100	81.313	ENSSPAG00000009194	sar1ab	100	81.313	Stegastes_partitus
ENSOMEG00000012020	-	100	80.303	ENSTRUG00000007269	sar1ab	100	80.303	Takifugu_rubripes
ENSOMEG00000012020	-	100	80.303	ENSTNIG00000008635	sar1ab	100	80.303	Tetraodon_nigroviridis
ENSOMEG00000012020	-	100	80.303	ENSXMAG00000003130	sar1ab	100	80.303	Xiphophorus_maculatus
ENSOMEG00000012020	-	100	88.889	ENSXMAG00000026223	SAR1A	100	88.889	Xiphophorus_maculatus