EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOMEG00000012060 (Gene tree)
Gene ID: 112138288
Gene Symbol: rbm17
Alias: -
Full Name: RNA binding motif protein 17
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 8475 bases
Position: chrNVQA01000638.1:216804-225278
Accession: 112138288
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000010735	RRM_1	PF00076.22	7e-06	1	1
ENSOMEP00000010765	RRM_1	PF00076.22	3.9e-05	1	1
ENSOMEP00000010765	G-patch	PF01585.23	4.8e-13	1	1
ENSOMEP00000010735	G-patch	PF01585.23	5.8e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000017666	-	2222	-	ENSOMEP00000010765	419 (aa)	XP_024116620	UPI000CF7F566
ENSOMET00000032033	-	456	-	ENSOMEP00000010735	151 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000012060's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000012060's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000012060	rbm17	100	88.050	ENSG00000134453	RBM17	100	79.481	Homo_sapiens
ENSOMEG00000012060	rbm17	82	37.500	ENSAPOG00000022094	-	99	37.500	Acanthochromis_polyacanthus
ENSOMEG00000012060	rbm17	99	93.285	ENSAPOG00000007101	rbm17	99	93.285	Acanthochromis_polyacanthus
ENSOMEG00000012060	rbm17	100	88.050	ENSAMEG00000002107	RBM17	100	79.717	Ailuropoda_melanoleuca
ENSOMEG00000012060	rbm17	100	93.125	ENSACIG00000006251	rbm17	100	87.441	Amphilophus_citrinellus
ENSOMEG00000012060	rbm17	100	93.112	ENSAOCG00000014892	rbm17	100	93.112	Amphiprion_ocellaris
ENSOMEG00000012060	rbm17	100	93.112	ENSAPEG00000022779	rbm17	100	93.112	Amphiprion_percula
ENSOMEG00000012060	rbm17	100	92.637	ENSATEG00000004406	rbm17	100	92.637	Anabas_testudineus
ENSOMEG00000012060	rbm17	100	87.500	ENSAPLG00000004190	RBM17	100	80.235	Anas_platyrhynchos
ENSOMEG00000012060	rbm17	99	85.185	ENSACAG00000005418	RBM17	99	78.093	Anolis_carolinensis
ENSOMEG00000012060	rbm17	100	88.050	ENSANAG00000030127	RBM17	100	86.290	Aotus_nancymaae
ENSOMEG00000012060	rbm17	100	84.906	ENSANAG00000019330	-	95	87.069	Aotus_nancymaae
ENSOMEG00000012060	rbm17	100	92.500	ENSACLG00000003928	rbm17	100	86.223	Astatotilapia_calliptera
ENSOMEG00000012060	rbm17	100	89.937	ENSAMXG00000005853	rbm17	100	84.360	Astyanax_mexicanus
ENSOMEG00000012060	rbm17	100	88.050	ENSBTAG00000021951	RBM17	100	79.717	Bos_taurus
ENSOMEG00000012060	rbm17	100	86.164	ENSBTAG00000011094	-	100	78.538	Bos_taurus
ENSOMEG00000012060	rbm17	94	42.384	WBGene00010233	F58B3.7	97	30.787	Caenorhabditis_elegans
ENSOMEG00000012060	rbm17	100	88.050	ENSCJAG00000020573	RBM17	100	79.953	Callithrix_jacchus
ENSOMEG00000012060	rbm17	100	88.050	ENSCAFG00000005206	RBM17	100	79.717	Canis_familiaris
ENSOMEG00000012060	rbm17	100	88.050	ENSCAFG00020005420	RBM17	100	77.488	Canis_lupus_dingo
ENSOMEG00000012060	rbm17	100	83.648	ENSCHIG00000019921	-	100	76.415	Capra_hircus
ENSOMEG00000012060	rbm17	100	88.050	ENSCHIG00000023204	-	100	79.717	Capra_hircus
ENSOMEG00000012060	rbm17	100	84.663	ENSTSYG00000001165	RBM17	98	90.598	Carlito_syrichta
ENSOMEG00000012060	rbm17	100	78.146	ENSCAPG00000006275	RBM17	100	65.796	Cavia_aperea
ENSOMEG00000012060	rbm17	100	85.890	ENSCPOG00000005679	RBM17	100	75.943	Cavia_porcellus
ENSOMEG00000012060	rbm17	100	88.050	ENSCCAG00000018655	RBM17	100	86.290	Cebus_capucinus
ENSOMEG00000012060	rbm17	100	88.050	ENSCATG00000041566	RBM17	97	89.167	Cercocebus_atys
ENSOMEG00000012060	rbm17	100	85.890	ENSCLAG00000012195	RBM17	99	79.717	Chinchilla_lanigera
ENSOMEG00000012060	rbm17	100	88.050	ENSCSAG00000013564	RBM17	100	79.481	Chlorocebus_sabaeus
ENSOMEG00000012060	rbm17	93	63.868	ENSCHOG00000005131	RBM17	100	63.868	Choloepus_hoffmanni
ENSOMEG00000012060	rbm17	100	87.500	ENSCPBG00000019836	RBM17	100	79.765	Chrysemys_picta_bellii
ENSOMEG00000012060	rbm17	64	40.000	ENSCING00000019470	-	88	35.385	Ciona_intestinalis
ENSOMEG00000012060	rbm17	100	58.537	ENSCING00000004543	-	98	54.229	Ciona_intestinalis
ENSOMEG00000012060	rbm17	100	59.146	ENSCSAVG00000008782	-	100	45.755	Ciona_savignyi
ENSOMEG00000012060	rbm17	100	88.050	ENSCANG00000030987	RBM17	97	89.167	Colobus_angolensis_palliatus
ENSOMEG00000012060	rbm17	100	81.761	ENSCANG00000023715	-	99	71.533	Colobus_angolensis_palliatus
ENSOMEG00000012060	rbm17	100	85.890	ENSCGRG00001013842	Rbm17	100	79.953	Cricetulus_griseus_chok1gshd
ENSOMEG00000012060	rbm17	100	78.344	ENSCGRG00001009256	-	100	63.183	Cricetulus_griseus_chok1gshd
ENSOMEG00000012060	rbm17	100	85.890	ENSCGRG00000006907	Rbm17	100	79.953	Cricetulus_griseus_crigri
ENSOMEG00000012060	rbm17	100	91.824	ENSCSEG00000018164	rbm17	100	86.493	Cynoglossus_semilaevis
ENSOMEG00000012060	rbm17	100	92.453	ENSCVAG00000002476	rbm17	100	82.423	Cyprinodon_variegatus
ENSOMEG00000012060	rbm17	100	79.577	ENSDARG00000031346	rbm17	100	79.577	Danio_rerio
ENSOMEG00000012060	rbm17	100	88.050	ENSDNOG00000035920	RBM17	100	78.302	Dasypus_novemcinctus
ENSOMEG00000012060	rbm17	97	52.128	FBgn0086683	Spf45	99	37.584	Drosophila_melanogaster
ENSOMEG00000012060	rbm17	100	87.421	ENSETEG00000006642	RBM17	100	62.085	Echinops_telfairi
ENSOMEG00000012060	rbm17	100	64.744	ENSEBUG00000010253	rbm17	84	69.048	Eptatretus_burgeri
ENSOMEG00000012060	rbm17	100	85.366	ENSEASG00005019205	-	100	76.066	Equus_asinus_asinus
ENSOMEG00000012060	rbm17	100	86.164	ENSEASG00005009236	-	100	76.590	Equus_asinus_asinus
ENSOMEG00000012060	rbm17	100	70.283	ENSECAG00000001379	-	100	70.283	Equus_caballus
ENSOMEG00000012060	rbm17	100	71.698	ENSECAG00000008939	RBM17	100	68.720	Equus_caballus
ENSOMEG00000012060	rbm17	86	62.943	ENSEEUG00000013077	RBM17	100	61.580	Erinaceus_europaeus
ENSOMEG00000012060	rbm17	100	84.149	ENSELUG00000006440	rbm17	100	84.149	Esox_lucius
ENSOMEG00000012060	rbm17	100	88.050	ENSFCAG00000031988	RBM17	100	79.717	Felis_catus
ENSOMEG00000012060	rbm17	100	86.792	ENSFALG00000001790	RBM17	100	79.059	Ficedula_albicollis
ENSOMEG00000012060	rbm17	100	85.890	ENSFDAG00000007470	RBM17	100	79.717	Fukomys_damarensis
ENSOMEG00000012060	rbm17	100	93.125	ENSFHEG00000001266	rbm17	100	89.486	Fundulus_heteroclitus
ENSOMEG00000012060	rbm17	99	81.190	ENSGMOG00000008438	rbm17	100	81.190	Gadus_morhua
ENSOMEG00000012060	rbm17	100	88.050	ENSGALG00000006332	RBM17	100	80.235	Gallus_gallus
ENSOMEG00000012060	rbm17	100	92.500	ENSGAFG00000019879	rbm17	100	88.836	Gambusia_affinis
ENSOMEG00000012060	rbm17	99	89.937	ENSGACG00000019174	rbm17	99	89.074	Gasterosteus_aculeatus
ENSOMEG00000012060	rbm17	100	87.500	ENSGAGG00000019906	RBM17	100	79.765	Gopherus_agassizii
ENSOMEG00000012060	rbm17	79	87.500	ENSGGOG00000044184	-	97	89.167	Gorilla_gorilla
ENSOMEG00000012060	rbm17	100	92.500	ENSHBUG00000016624	rbm17	100	92.399	Haplochromis_burtoni
ENSOMEG00000012060	rbm17	100	85.890	ENSHGLG00000011580	RBM17	100	79.717	Heterocephalus_glaber_female
ENSOMEG00000012060	rbm17	100	77.914	ENSHGLG00100010556	-	100	61.758	Heterocephalus_glaber_male
ENSOMEG00000012060	rbm17	100	85.890	ENSHGLG00100010460	RBM17	100	79.717	Heterocephalus_glaber_male
ENSOMEG00000012060	rbm17	99	87.828	ENSHCOG00000010865	rbm17	100	87.828	Hippocampus_comes
ENSOMEG00000012060	rbm17	100	87.037	ENSIPUG00000007699	Rbm17	100	81.412	Ictalurus_punctatus
ENSOMEG00000012060	rbm17	100	85.890	ENSSTOG00000013591	RBM17	100	79.953	Ictidomys_tridecemlineatus
ENSOMEG00000012060	rbm17	100	61.438	ENSJJAG00000000993	-	100	57.746	Jaculus_jaculus
ENSOMEG00000012060	rbm17	100	85.890	ENSJJAG00000022886	Rbm17	100	79.953	Jaculus_jaculus
ENSOMEG00000012060	rbm17	100	91.875	ENSKMAG00000021400	rbm17	100	91.211	Kryptolebias_marmoratus
ENSOMEG00000012060	rbm17	100	90.024	ENSLBEG00000000881	rbm17	100	90.024	Labrus_bergylta
ENSOMEG00000012060	rbm17	99	69.942	ENSLACG00000017297	RBM17	99	64.720	Latimeria_chalumnae
ENSOMEG00000012060	rbm17	100	86.875	ENSLOCG00000015659	rbm17	100	79.343	Lepisosteus_oculatus
ENSOMEG00000012060	rbm17	100	84.848	ENSLAFG00000011629	RBM17	100	79.717	Loxodonta_africana
ENSOMEG00000012060	rbm17	100	88.050	ENSMFAG00000035521	RBM17	97	89.167	Macaca_fascicularis
ENSOMEG00000012060	rbm17	100	88.050	ENSMMUG00000015152	RBM17	97	89.167	Macaca_mulatta
ENSOMEG00000012060	rbm17	100	88.050	ENSMNEG00000017264	RBM17	97	89.167	Macaca_nemestrina
ENSOMEG00000012060	rbm17	100	88.050	ENSMLEG00000029340	RBM17	97	89.167	Mandrillus_leucophaeus
ENSOMEG00000012060	rbm17	100	92.500	ENSMAMG00000000387	rbm17	100	91.211	Mastacembelus_armatus
ENSOMEG00000012060	rbm17	100	92.500	ENSMZEG00005015179	rbm17	100	92.399	Maylandia_zebra
ENSOMEG00000012060	rbm17	100	84.337	ENSMGAG00000003981	RBM17	100	80.094	Meleagris_gallopavo
ENSOMEG00000012060	rbm17	100	85.890	ENSMAUG00000019247	Rbm17	100	79.953	Mesocricetus_auratus
ENSOMEG00000012060	rbm17	100	87.421	ENSMICG00000003976	-	100	78.538	Microcebus_murinus
ENSOMEG00000012060	rbm17	61	90.217	ENSMICG00000047113	-	72	90.217	Microcebus_murinus
ENSOMEG00000012060	rbm17	100	78.313	ENSMICG00000041489	-	100	75.059	Microcebus_murinus
ENSOMEG00000012060	rbm17	100	85.890	ENSMOCG00000011847	Rbm17	100	79.953	Microtus_ochrogaster
ENSOMEG00000012060	rbm17	93	63.452	ENSMOCG00000014517	-	99	63.452	Microtus_ochrogaster
ENSOMEG00000012060	rbm17	100	88.961	ENSMMOG00000010264	rbm17	100	81.455	Mola_mola
ENSOMEG00000012060	rbm17	100	88.679	ENSMODG00000016648	RBM17	100	79.245	Monodelphis_domestica
ENSOMEG00000012060	rbm17	100	92.500	ENSMALG00000010597	rbm17	100	91.232	Monopterus_albus
ENSOMEG00000012060	rbm17	100	85.890	MGP_CAROLIEiJ_G0023173	Rbm17	100	80.189	Mus_caroli
ENSOMEG00000012060	rbm17	100	85.890	ENSMUSG00000037197	Rbm17	100	80.189	Mus_musculus
ENSOMEG00000012060	rbm17	100	85.890	MGP_PahariEiJ_G0019233	Rbm17	100	79.953	Mus_pahari
ENSOMEG00000012060	rbm17	100	85.890	MGP_SPRETEiJ_G0024091	Rbm17	100	80.189	Mus_spretus
ENSOMEG00000012060	rbm17	86	77.384	ENSMPUG00000016359	RBM17	96	77.384	Mustela_putorius_furo
ENSOMEG00000012060	rbm17	100	85.535	ENSMLUG00000025709	-	100	74.171	Myotis_lucifugus
ENSOMEG00000012060	rbm17	100	81.707	ENSMLUG00000002302	-	100	76.941	Myotis_lucifugus
ENSOMEG00000012060	rbm17	100	85.890	ENSNGAG00000000741	Rbm17	100	79.953	Nannospalax_galili
ENSOMEG00000012060	rbm17	100	77.483	ENSNGAG00000000663	-	100	55.425	Nannospalax_galili
ENSOMEG00000012060	rbm17	100	92.500	ENSNBRG00000018148	rbm17	100	83.848	Neolamprologus_brichardi
ENSOMEG00000012060	rbm17	100	88.050	ENSNLEG00000033350	RBM17	100	87.097	Nomascus_leucogenys
ENSOMEG00000012060	rbm17	100	74.843	ENSMEUG00000011347	RBM17	100	72.877	Notamacropus_eugenii
ENSOMEG00000012060	rbm17	100	69.182	ENSOPRG00000002993	RBM17	100	68.868	Ochotona_princeps
ENSOMEG00000012060	rbm17	100	85.366	ENSODEG00000004393	RBM17	100	79.765	Octodon_degus
ENSOMEG00000012060	rbm17	100	59.509	ENSODEG00000007286	-	99	60.147	Octodon_degus
ENSOMEG00000012060	rbm17	100	92.500	ENSONIG00000011838	rbm17	100	90.261	Oreochromis_niloticus
ENSOMEG00000012060	rbm17	100	87.578	ENSOANG00000015455	RBM17	100	79.717	Ornithorhynchus_anatinus
ENSOMEG00000012060	rbm17	74	91.892	ENSOCUG00000004516	-	74	91.379	Oryctolagus_cuniculus
ENSOMEG00000012060	rbm17	100	98.091	ENSORLG00000028798	rbm17	100	98.091	Oryzias_latipes
ENSOMEG00000012060	rbm17	100	97.852	ENSORLG00020004593	rbm17	98	97.852	Oryzias_latipes_hni
ENSOMEG00000012060	rbm17	100	98.329	ENSORLG00015000033	rbm17	99	98.329	Oryzias_latipes_hsok
ENSOMEG00000012060	rbm17	100	85.890	ENSOGAG00000015687	RBM17	100	78.774	Otolemur_garnettii
ENSOMEG00000012060	rbm17	100	88.050	ENSOARG00000012975	RBM17	100	79.717	Ovis_aries
ENSOMEG00000012060	rbm17	100	88.050	ENSPPAG00000032347	RBM17	97	89.167	Pan_paniscus
ENSOMEG00000012060	rbm17	100	88.050	ENSPPRG00000010706	RBM17	100	79.717	Panthera_pardus
ENSOMEG00000012060	rbm17	100	88.050	ENSPTIG00000007596	RBM17	100	79.717	Panthera_tigris_altaica
ENSOMEG00000012060	rbm17	100	88.050	ENSPTRG00000002265	RBM17	97	89.167	Pan_troglodytes
ENSOMEG00000012060	rbm17	100	88.050	ENSPANG00000023425	RBM17	97	89.167	Papio_anubis
ENSOMEG00000012060	rbm17	100	86.875	ENSPKIG00000005048	-	100	78.605	Paramormyrops_kingsleyae
ENSOMEG00000012060	rbm17	100	83.851	ENSPKIG00000025526	rbm17	100	79.859	Paramormyrops_kingsleyae
ENSOMEG00000012060	rbm17	100	84.663	ENSPSIG00000012332	RBM17	100	78.454	Pelodiscus_sinensis
ENSOMEG00000012060	rbm17	100	91.824	ENSPMGG00000007980	rbm17	100	82.701	Periophthalmus_magnuspinnatus
ENSOMEG00000012060	rbm17	100	85.890	ENSPEMG00000014320	Rbm17	100	79.953	Peromyscus_maniculatus_bairdii
ENSOMEG00000012060	rbm17	100	88.679	ENSPCIG00000019260	-	100	78.873	Phascolarctos_cinereus
ENSOMEG00000012060	rbm17	100	92.162	ENSPFOG00000013271	rbm17	100	92.162	Poecilia_formosa
ENSOMEG00000012060	rbm17	100	93.750	ENSPLAG00000004455	rbm17	100	92.162	Poecilia_latipinna
ENSOMEG00000012060	rbm17	100	93.750	ENSPMEG00000014864	rbm17	100	92.162	Poecilia_mexicana
ENSOMEG00000012060	rbm17	100	93.125	ENSPREG00000015589	rbm17	100	92.162	Poecilia_reticulata
ENSOMEG00000012060	rbm17	81	55.942	ENSPPYG00000019042	-	100	55.942	Pongo_abelii
ENSOMEG00000012060	rbm17	99	66.667	ENSPPYG00000019881	-	100	59.479	Pongo_abelii
ENSOMEG00000012060	rbm17	100	88.050	ENSPPYG00000002067	RBM17	100	79.481	Pongo_abelii
ENSOMEG00000012060	rbm17	100	72.406	ENSPCAG00000016879	RBM17	100	72.406	Procavia_capensis
ENSOMEG00000012060	rbm17	100	88.050	ENSPCOG00000027881	RBM17	100	79.717	Propithecus_coquereli
ENSOMEG00000012060	rbm17	100	71.698	ENSPVAG00000015499	RBM17	100	69.575	Pteropus_vampyrus
ENSOMEG00000012060	rbm17	100	92.500	ENSPNYG00000015274	rbm17	100	79.097	Pundamilia_nyererei
ENSOMEG00000012060	rbm17	100	89.937	ENSPNAG00000030046	rbm17	100	83.924	Pygocentrus_nattereri
ENSOMEG00000012060	rbm17	100	85.890	ENSRNOG00000018767	Rbm17	100	79.953	Rattus_norvegicus
ENSOMEG00000012060	rbm17	100	88.050	ENSRBIG00000043727	RBM17	97	89.167	Rhinopithecus_bieti
ENSOMEG00000012060	rbm17	100	88.050	ENSRROG00000044142	RBM17	97	89.167	Rhinopithecus_roxellana
ENSOMEG00000012060	rbm17	100	87.421	ENSSBOG00000031661	-	92	91.228	Saimiri_boliviensis_boliviensis
ENSOMEG00000012060	rbm17	100	81.875	ENSSBOG00000023653	-	100	69.811	Saimiri_boliviensis_boliviensis
ENSOMEG00000012060	rbm17	100	88.679	ENSSHAG00000012480	-	100	79.717	Sarcophilus_harrisii
ENSOMEG00000012060	rbm17	100	86.250	ENSSFOG00015009892	rbm17	100	80.796	Scleropages_formosus
ENSOMEG00000012060	rbm17	100	90.625	ENSSMAG00000012368	rbm17	100	87.037	Scophthalmus_maximus
ENSOMEG00000012060	rbm17	100	93.125	ENSSDUG00000015015	rbm17	100	90.909	Seriola_dumerili
ENSOMEG00000012060	rbm17	100	93.125	ENSSLDG00000014486	rbm17	100	90.909	Seriola_lalandi_dorsalis
ENSOMEG00000012060	rbm17	50	82.727	ENSSARG00000001792	-	79	82.727	Sorex_araneus
ENSOMEG00000012060	rbm17	99	88.050	ENSSPUG00000001036	RBM17	99	79.953	Sphenodon_punctatus
ENSOMEG00000012060	rbm17	100	93.112	ENSSPAG00000002338	rbm17	100	93.112	Stegastes_partitus
ENSOMEG00000012060	rbm17	100	88.050	ENSSSCG00000011134	RBM17	100	79.717	Sus_scrofa
ENSOMEG00000012060	rbm17	100	84.663	ENSTGUG00000002013	RBM17	100	79.529	Taeniopygia_guttata
ENSOMEG00000012060	rbm17	100	93.082	ENSTRUG00000010698	rbm17	100	90.261	Takifugu_rubripes
ENSOMEG00000012060	rbm17	100	90.123	ENSTNIG00000006892	rbm17	100	90.024	Tetraodon_nigroviridis
ENSOMEG00000012060	rbm17	100	61.611	ENSTBEG00000014686	RBM17	100	61.611	Tupaia_belangeri
ENSOMEG00000012060	rbm17	100	88.050	ENSTTRG00000001344	RBM17	100	78.590	Tursiops_truncatus
ENSOMEG00000012060	rbm17	100	88.050	ENSUAMG00000009499	RBM17	100	76.066	Ursus_americanus
ENSOMEG00000012060	rbm17	100	88.050	ENSUMAG00000012237	RBM17	100	79.717	Ursus_maritimus
ENSOMEG00000012060	rbm17	100	77.358	ENSVPAG00000005497	RBM17	100	67.925	Vicugna_pacos
ENSOMEG00000012060	rbm17	100	88.050	ENSVVUG00000006780	RBM17	100	77.488	Vulpes_vulpes
ENSOMEG00000012060	rbm17	74	87.387	ENSVVUG00000019160	-	98	86.207	Vulpes_vulpes
ENSOMEG00000012060	rbm17	99	84.810	ENSXETG00000018123	rbm17	100	76.066	Xenopus_tropicalis
ENSOMEG00000012060	rbm17	100	91.875	ENSXMAG00000008674	rbm17	100	91.211	Xiphophorus_maculatus