EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOMEG00000012174 (Gene tree)
Gene ID: 112159115
Gene Symbol: prpf6
Alias: -
Full Name: pre-mRNA processing factor 6
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 17850 bases
Position: chrNVQA01000024.1:17091311-17109160
Accession: 112159115
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000010873	PRP1_N	PF06424.12	1.8e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000032090	-	7376	-	ENSOMEP00000010873	969 (aa)	XP_024148750	UPI000CF8171A

Gene Model

Click here to download ENSOMEG00000012174's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000012174's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000012174	prpf6	96	92.349	ENSG00000101161	PRPF6	100	91.923	Homo_sapiens
ENSOMEG00000012174	prpf6	100	96.904	ENSAPOG00000010395	prpf6	100	96.904	Acanthochromis_polyacanthus
ENSOMEG00000012174	prpf6	96	91.295	ENSAMEG00000001916	PRPF6	99	90.870	Ailuropoda_melanoleuca
ENSOMEG00000012174	prpf6	100	96.801	ENSACIG00000019862	prpf6	100	96.801	Amphilophus_citrinellus
ENSOMEG00000012174	prpf6	100	97.007	ENSAOCG00000012988	prpf6	100	97.007	Amphiprion_ocellaris
ENSOMEG00000012174	prpf6	96	90.860	ENSAPEG00000008301	prpf6	100	91.075	Amphiprion_percula
ENSOMEG00000012174	prpf6	100	96.285	ENSATEG00000005581	prpf6	100	96.285	Anabas_testudineus
ENSOMEG00000012174	prpf6	96	92.455	ENSACAG00000006464	PRPF6	95	92.030	Anolis_carolinensis
ENSOMEG00000012174	prpf6	96	92.561	ENSANAG00000012661	PRPF6	100	93.286	Aotus_nancymaae
ENSOMEG00000012174	prpf6	100	97.214	ENSACLG00000025875	prpf6	100	97.214	Astatotilapia_calliptera
ENSOMEG00000012174	prpf6	97	93.644	ENSAMXG00000001929	prpf6	100	92.213	Astyanax_mexicanus
ENSOMEG00000012174	prpf6	96	92.242	ENSBTAG00000011656	PRPF6	100	91.817	Bos_taurus
ENSOMEG00000012174	prpf6	96	92.561	ENSCJAG00000010616	PRPF6	100	92.136	Callithrix_jacchus
ENSOMEG00000012174	prpf6	96	92.349	ENSCAFG00000013165	PRPF6	100	91.923	Canis_familiaris
ENSOMEG00000012174	prpf6	96	92.349	ENSCAFG00020002050	PRPF6	100	91.923	Canis_lupus_dingo
ENSOMEG00000012174	prpf6	96	92.242	ENSCHIG00000018187	PRPF6	100	91.817	Capra_hircus
ENSOMEG00000012174	prpf6	96	92.561	ENSTSYG00000007814	PRPF6	100	92.136	Carlito_syrichta
ENSOMEG00000012174	prpf6	93	91.821	ENSCAPG00000015077	PRPF6	100	90.949	Cavia_aperea
ENSOMEG00000012174	prpf6	96	92.986	ENSCPOG00000007518	PRPF6	100	92.561	Cavia_porcellus
ENSOMEG00000012174	prpf6	96	89.479	ENSCCAG00000024564	PRPF6	100	89.054	Cebus_capucinus
ENSOMEG00000012174	prpf6	96	92.242	ENSCATG00000037473	PRPF6	100	91.817	Cercocebus_atys
ENSOMEG00000012174	prpf6	96	89.160	ENSCLAG00000003854	PRPF6	100	88.735	Chinchilla_lanigera
ENSOMEG00000012174	prpf6	96	87.856	ENSCSAG00000016742	PRPF6	100	87.434	Chlorocebus_sabaeus
ENSOMEG00000012174	prpf6	81	78.049	ENSCHOG00000003315	-	98	77.851	Choloepus_hoffmanni
ENSOMEG00000012174	prpf6	98	91.259	ENSCPBG00000013964	PRPF6	96	92.340	Chrysemys_picta_bellii
ENSOMEG00000012174	prpf6	96	72.304	ENSCING00000008817	-	99	71.882	Ciona_intestinalis
ENSOMEG00000012174	prpf6	96	92.242	ENSCANG00000038230	PRPF6	100	91.817	Colobus_angolensis_palliatus
ENSOMEG00000012174	prpf6	96	92.986	ENSCGRG00001022666	Prpf6	100	92.561	Cricetulus_griseus_chok1gshd
ENSOMEG00000012174	prpf6	96	91.505	ENSCSEG00000018561	prpf6	100	91.505	Cynoglossus_semilaevis
ENSOMEG00000012174	prpf6	100	96.698	ENSCVAG00000010550	prpf6	100	96.698	Cyprinodon_variegatus
ENSOMEG00000012174	prpf6	100	92.213	ENSDARG00000091367	prpf6	100	93.750	Danio_rerio
ENSOMEG00000012174	prpf6	96	91.923	ENSDNOG00000040544	PRPF6	100	91.605	Dasypus_novemcinctus
ENSOMEG00000012174	prpf6	87	91.939	ENSDORG00000005406	Prpf6	100	91.939	Dipodomys_ordii
ENSOMEG00000012174	prpf6	96	71.828	FBgn0036828	CG6841	99	71.935	Drosophila_melanogaster
ENSOMEG00000012174	prpf6	83	91.082	ENSETEG00000004447	PRPF6	85	91.082	Echinops_telfairi
ENSOMEG00000012174	prpf6	96	86.667	ENSEBUG00000008835	prpf6	100	86.243	Eptatretus_burgeri
ENSOMEG00000012174	prpf6	97	92.202	ENSEASG00005023115	PRPF6	100	92.242	Equus_asinus_asinus
ENSOMEG00000012174	prpf6	96	88.417	ENSECAG00000013983	PRPF6	100	87.991	Equus_caballus
ENSOMEG00000012174	prpf6	86	95.833	ENSEEUG00000000180	PRPF6	81	95.833	Erinaceus_europaeus
ENSOMEG00000012174	prpf6	97	94.055	ENSELUG00000001945	prpf6	94	94.055	Esox_lucius
ENSOMEG00000012174	prpf6	96	92.349	ENSFCAG00000001183	PRPF6	100	91.923	Felis_catus
ENSOMEG00000012174	prpf6	96	86.170	ENSFALG00000006046	-	97	86.354	Ficedula_albicollis
ENSOMEG00000012174	prpf6	96	92.381	ENSFALG00000010326	-	98	92.063	Ficedula_albicollis
ENSOMEG00000012174	prpf6	96	91.605	ENSFDAG00000006451	PRPF6	100	92.177	Fukomys_damarensis
ENSOMEG00000012174	prpf6	100	97.110	ENSFHEG00000000560	prpf6	100	97.110	Fundulus_heteroclitus
ENSOMEG00000012174	prpf6	97	93.425	ENSGMOG00000015622	prpf6	99	92.895	Gadus_morhua
ENSOMEG00000012174	prpf6	96	92.667	ENSGALG00000006001	PRPF6	100	92.349	Gallus_gallus
ENSOMEG00000012174	prpf6	100	92.466	ENSGAFG00000021109	prpf6	100	92.466	Gambusia_affinis
ENSOMEG00000012174	prpf6	97	95.127	ENSGACG00000002576	prpf6	100	95.127	Gasterosteus_aculeatus
ENSOMEG00000012174	prpf6	98	91.354	ENSGAGG00000008653	PRPF6	96	92.447	Gopherus_agassizii
ENSOMEG00000012174	prpf6	96	92.349	ENSGGOG00000016876	PRPF6	100	91.923	Gorilla_gorilla
ENSOMEG00000012174	prpf6	100	97.214	ENSHBUG00000004496	prpf6	100	97.214	Haplochromis_burtoni
ENSOMEG00000012174	prpf6	96	92.880	ENSHGLG00000009222	PRPF6	100	92.455	Heterocephalus_glaber_female
ENSOMEG00000012174	prpf6	93	92.803	ENSHGLG00100016600	PRPF6	100	92.366	Heterocephalus_glaber_male
ENSOMEG00000012174	prpf6	100	95.253	ENSHCOG00000011513	prpf6	100	95.253	Hippocampus_comes
ENSOMEG00000012174	prpf6	100	91.889	ENSIPUG00000004912	prpf6	100	91.889	Ictalurus_punctatus
ENSOMEG00000012174	prpf6	96	90.446	ENSSTOG00000002922	PRPF6	100	89.597	Ictidomys_tridecemlineatus
ENSOMEG00000012174	prpf6	96	92.986	ENSJJAG00000000836	Prpf6	100	92.561	Jaculus_jaculus
ENSOMEG00000012174	prpf6	100	97.317	ENSKMAG00000017800	prpf6	100	97.317	Kryptolebias_marmoratus
ENSOMEG00000012174	prpf6	100	95.872	ENSLBEG00000012582	prpf6	100	95.872	Labrus_bergylta
ENSOMEG00000012174	prpf6	96	93.830	ENSLOCG00000004827	prpf6	96	92.021	Lepisosteus_oculatus
ENSOMEG00000012174	prpf6	96	92.030	ENSLAFG00000005272	PRPF6	100	91.605	Loxodonta_africana
ENSOMEG00000012174	prpf6	96	92.242	ENSMFAG00000037542	PRPF6	100	91.817	Macaca_fascicularis
ENSOMEG00000012174	prpf6	96	86.200	ENSMMUG00000015558	PRPF6	98	93.588	Macaca_mulatta
ENSOMEG00000012174	prpf6	96	79.873	ENSMNEG00000045555	PRPF6	100	79.449	Macaca_nemestrina
ENSOMEG00000012174	prpf6	100	96.078	ENSMAMG00000010718	prpf6	100	96.078	Mastacembelus_armatus
ENSOMEG00000012174	prpf6	90	97.486	ENSMZEG00005026539	prpf6	100	97.486	Maylandia_zebra
ENSOMEG00000012174	prpf6	97	97.441	ENSMZEG00005015261	-	100	97.441	Maylandia_zebra
ENSOMEG00000012174	prpf6	93	92.803	ENSMGAG00000006634	PRPF6	100	92.475	Meleagris_gallopavo
ENSOMEG00000012174	prpf6	96	92.986	ENSMAUG00000013969	Prpf6	100	92.561	Mesocricetus_auratus
ENSOMEG00000012174	prpf6	84	91.606	ENSMICG00000017793	PRPF6	98	91.615	Microcebus_murinus
ENSOMEG00000012174	prpf6	96	92.880	ENSMOCG00000001701	Prpf6	100	92.455	Microtus_ochrogaster
ENSOMEG00000012174	prpf6	96	96.559	ENSMMOG00000020419	prpf6	100	96.559	Mola_mola
ENSOMEG00000012174	prpf6	96	93.835	ENSMODG00000017051	PRPF6	99	93.342	Monodelphis_domestica
ENSOMEG00000012174	prpf6	95	97.065	ENSMALG00000000089	prpf6	100	97.065	Monopterus_albus
ENSOMEG00000012174	prpf6	96	86.716	MGP_CAROLIEiJ_G0024814	Prpf6	100	96.296	Mus_caroli
ENSOMEG00000012174	prpf6	96	92.986	ENSMUSG00000002455	Prpf6	100	96.296	Mus_musculus
ENSOMEG00000012174	prpf6	96	92.986	MGP_PahariEiJ_G0026262	Prpf6	100	96.296	Mus_pahari
ENSOMEG00000012174	prpf6	96	92.986	MGP_SPRETEiJ_G0025741	Prpf6	100	96.296	Mus_spretus
ENSOMEG00000012174	prpf6	86	92.467	ENSMPUG00000008673	PRPF6	98	92.467	Mustela_putorius_furo
ENSOMEG00000012174	prpf6	96	93.092	ENSNGAG00000003365	Prpf6	100	92.667	Nannospalax_galili
ENSOMEG00000012174	prpf6	100	97.317	ENSNBRG00000015025	prpf6	100	97.317	Neolamprologus_brichardi
ENSOMEG00000012174	prpf6	96	92.242	ENSNLEG00000010208	PRPF6	100	91.817	Nomascus_leucogenys
ENSOMEG00000012174	prpf6	96	83.333	ENSMEUG00000009824	-	90	83.597	Notamacropus_eugenii
ENSOMEG00000012174	prpf6	96	87.141	ENSODEG00000004841	PRPF6	100	86.716	Octodon_degus
ENSOMEG00000012174	prpf6	100	97.007	ENSONIG00000017406	prpf6	100	97.007	Oreochromis_niloticus
ENSOMEG00000012174	prpf6	96	92.667	ENSOANG00000004920	PRPF6	100	92.242	Ornithorhynchus_anatinus
ENSOMEG00000012174	prpf6	95	90.665	ENSOCUG00000014151	PRPF6	100	90.236	Oryctolagus_cuniculus
ENSOMEG00000012174	prpf6	100	98.658	ENSORLG00000009592	prpf6	100	98.658	Oryzias_latipes
ENSOMEG00000012174	prpf6	100	98.762	ENSORLG00020001458	prpf6	100	98.762	Oryzias_latipes_hni
ENSOMEG00000012174	prpf6	100	98.762	ENSORLG00015018762	prpf6	100	98.762	Oryzias_latipes_hsok
ENSOMEG00000012174	prpf6	96	85.775	ENSOGAG00000007573	PRPF6	100	85.350	Otolemur_garnettii
ENSOMEG00000012174	prpf6	96	91.817	ENSOARG00000008776	PRPF6	99	91.392	Ovis_aries
ENSOMEG00000012174	prpf6	96	92.349	ENSPPAG00000008686	PRPF6	100	91.923	Pan_paniscus
ENSOMEG00000012174	prpf6	96	92.349	ENSPPRG00000008497	PRPF6	100	91.923	Panthera_pardus
ENSOMEG00000012174	prpf6	93	92.257	ENSPTIG00000011184	PRPF6	97	91.821	Panthera_tigris_altaica
ENSOMEG00000012174	prpf6	96	92.349	ENSPTRG00000013765	PRPF6	100	91.923	Pan_troglodytes
ENSOMEG00000012174	prpf6	96	91.817	ENSPANG00000024135	PRPF6	100	91.392	Papio_anubis
ENSOMEG00000012174	prpf6	98	92.827	ENSPKIG00000005627	prpf6	99	94.043	Paramormyrops_kingsleyae
ENSOMEG00000012174	prpf6	90	92.290	ENSPSIG00000007717	PRPF6	100	91.837	Pelodiscus_sinensis
ENSOMEG00000012174	prpf6	99	94.105	ENSPMGG00000008925	prpf6	99	93.382	Periophthalmus_magnuspinnatus
ENSOMEG00000012174	prpf6	96	92.986	ENSPEMG00000016036	Prpf6	100	92.561	Peromyscus_maniculatus_bairdii
ENSOMEG00000012174	prpf6	96	88.486	ENSPMAG00000006144	prpf6	99	88.486	Petromyzon_marinus
ENSOMEG00000012174	prpf6	96	92.986	ENSPCIG00000017909	PRPF6	100	92.561	Phascolarctos_cinereus
ENSOMEG00000012174	prpf6	100	96.115	ENSPFOG00000006431	prpf6	99	96.115	Poecilia_formosa
ENSOMEG00000012174	prpf6	100	96.904	ENSPLAG00000005974	prpf6	100	96.904	Poecilia_latipinna
ENSOMEG00000012174	prpf6	100	97.110	ENSPMEG00000009977	prpf6	100	97.110	Poecilia_mexicana
ENSOMEG00000012174	prpf6	100	97.317	ENSPREG00000017993	prpf6	95	97.317	Poecilia_reticulata
ENSOMEG00000012174	prpf6	96	91.817	ENSPPYG00000011256	PRPF6	100	91.392	Pongo_abelii
ENSOMEG00000012174	prpf6	91	95.098	ENSPCAG00000006536	PRPF6	88	94.444	Procavia_capensis
ENSOMEG00000012174	prpf6	96	92.136	ENSPCOG00000016881	PRPF6	100	91.711	Propithecus_coquereli
ENSOMEG00000012174	prpf6	96	86.504	ENSPVAG00000014316	PRPF6	100	86.079	Pteropus_vampyrus
ENSOMEG00000012174	prpf6	100	83.265	ENSPNYG00000001939	prpf6	100	83.265	Pundamilia_nyererei
ENSOMEG00000012174	prpf6	97	94.597	ENSPNAG00000015606	prpf6	100	92.930	Pygocentrus_nattereri
ENSOMEG00000012174	prpf6	96	92.880	ENSRNOG00000051498	Prpf6	100	92.455	Rattus_norvegicus
ENSOMEG00000012174	prpf6	96	92.242	ENSRBIG00000043613	PRPF6	100	91.817	Rhinopithecus_bieti
ENSOMEG00000012174	prpf6	96	89.206	ENSRROG00000040969	PRPF6	98	92.215	Rhinopithecus_roxellana
ENSOMEG00000012174	prpf6	87	89.735	ENSSBOG00000020632	PRPF6	93	87.543	Saimiri_boliviensis_boliviensis
ENSOMEG00000012174	prpf6	96	92.986	ENSSHAG00000016810	PRPF6	100	92.561	Sarcophilus_harrisii
ENSOMEG00000012174	prpf6	95	94.409	ENSSFOG00015020859	prpf6	100	93.978	Scleropages_formosus
ENSOMEG00000012174	prpf6	100	94.840	ENSSMAG00000008112	prpf6	100	94.840	Scophthalmus_maximus
ENSOMEG00000012174	prpf6	100	96.182	ENSSDUG00000016142	prpf6	100	96.182	Seriola_dumerili
ENSOMEG00000012174	prpf6	100	96.182	ENSSLDG00000025283	prpf6	99	96.182	Seriola_lalandi_dorsalis
ENSOMEG00000012174	prpf6	90	91.600	ENSSPUG00000018260	PRPF6	100	91.146	Sphenodon_punctatus
ENSOMEG00000012174	prpf6	100	96.698	ENSSPAG00000015850	prpf6	100	96.698	Stegastes_partitus
ENSOMEG00000012174	prpf6	96	92.136	ENSSSCG00000029119	PRPF6	98	91.917	Sus_scrofa
ENSOMEG00000012174	prpf6	96	92.479	ENSTGUG00000007221	PRPF6	100	92.161	Taeniopygia_guttata
ENSOMEG00000012174	prpf6	100	94.943	ENSTRUG00000002920	prpf6	100	94.943	Takifugu_rubripes
ENSOMEG00000012174	prpf6	96	89.479	ENSTNIG00000017873	prpf6	100	89.479	Tetraodon_nigroviridis
ENSOMEG00000012174	prpf6	85	93.889	ENSTBEG00000005348	PRPF6	85	91.667	Tupaia_belangeri
ENSOMEG00000012174	prpf6	96	92.030	ENSTTRG00000013068	PRPF6	100	91.605	Tursiops_truncatus
ENSOMEG00000012174	prpf6	94	90.761	ENSUMAG00000021631	PRPF6	98	90.326	Ursus_maritimus
ENSOMEG00000012174	prpf6	96	92.349	ENSVVUG00000014948	PRPF6	100	91.923	Vulpes_vulpes
ENSOMEG00000012174	prpf6	96	92.234	ENSXETG00000012054	prpf6	97	91.809	Xenopus_tropicalis
ENSOMEG00000012174	prpf6	100	96.801	ENSXCOG00000008082	prpf6	100	96.801	Xiphophorus_couchianus
ENSOMEG00000012174	prpf6	100	96.904	ENSXMAG00000015581	prpf6	100	96.904	Xiphophorus_maculatus