EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000012220 (Gene tree)
Gene ID: 112146488
Gene Symbol: e4f1
Alias: -
Full Name: E4F transcription factor 1
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 5325 bases
Position: chrNVQA01000010.1:11029797-11035121
Accession: 112146488
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000028905	zf-C2H2	PF00096.26	1.3e-27	1	4
ENSOMEP00000028905	zf-C2H2	PF00096.26	1.3e-27	2	4
ENSOMEP00000028905	zf-C2H2	PF00096.26	1.3e-27	3	4
ENSOMEP00000028905	zf-C2H2	PF00096.26	1.3e-27	4	4
ENSOMEP00000028905	zf-met	PF12874.7	4.8e-06	1	2
ENSOMEP00000028905	zf-met	PF12874.7	4.8e-06	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000032118	-	2935	XM_024272336	ENSOMEP00000028905	756 (aa)	XP_024128104	UPI000CF7DF04

Gene Model

Click here to download ENSOMEG00000012220's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000012220's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000012220	e4f1	55	38.788	ENSOMEG00000021518	-	92	44.156
ENSOMEG00000012220	e4f1	64	37.234	ENSOMEG00000015658	znf646	90	37.179
ENSOMEG00000012220	e4f1	71	40.120	ENSOMEG00000000934	-	87	40.120
ENSOMEG00000012220	e4f1	65	39.759	ENSOMEG00000011566	-	97	39.759
ENSOMEG00000012220	e4f1	62	42.466	ENSOMEG00000019853	-	91	42.623
ENSOMEG00000012220	e4f1	70	41.975	ENSOMEG00000019179	-	98	43.750
ENSOMEG00000012220	e4f1	58	40.984	ENSOMEG00000004527	-	92	40.000
ENSOMEG00000012220	e4f1	58	40.000	ENSOMEG00000018735	-	97	40.000
ENSOMEG00000012220	e4f1	52	42.500	ENSOMEG00000017245	-	84	42.500
ENSOMEG00000012220	e4f1	51	47.059	ENSOMEG00000009377	-	87	47.059
ENSOMEG00000012220	e4f1	68	40.000	ENSOMEG00000009816	-	99	42.623
ENSOMEG00000012220	e4f1	52	43.750	ENSOMEG00000013677	-	95	43.750
ENSOMEG00000012220	e4f1	52	37.931	ENSOMEG00000016853	-	73	37.931
ENSOMEG00000012220	e4f1	61	45.902	ENSOMEG00000002268	-	89	47.222
ENSOMEG00000012220	e4f1	55	45.000	ENSOMEG00000022915	-	95	45.000
ENSOMEG00000012220	e4f1	67	42.105	ENSOMEG00000004586	-	97	43.243
ENSOMEG00000012220	e4f1	78	41.026	ENSOMEG00000018562	-	97	42.331
ENSOMEG00000012220	e4f1	61	36.905	ENSOMEG00000012915	znf319b	80	40.260
ENSOMEG00000012220	e4f1	60	38.750	ENSOMEG00000012263	-	95	38.750
ENSOMEG00000012220	e4f1	65	39.474	ENSOMEG00000019227	-	97	44.595
ENSOMEG00000012220	e4f1	74	38.835	ENSOMEG00000021945	-	96	38.750
ENSOMEG00000012220	e4f1	61	48.750	ENSOMEG00000022620	-	99	48.750
ENSOMEG00000012220	e4f1	53	37.662	ENSOMEG00000000376	si:ch211-216l23.1	57	37.662
ENSOMEG00000012220	e4f1	51	44.000	ENSOMEG00000015640	-	70	44.000
ENSOMEG00000012220	e4f1	67	42.169	ENSOMEG00000023744	-	99	42.169
ENSOMEG00000012220	e4f1	56	40.000	ENSOMEG00000008365	-	71	40.000
ENSOMEG00000012220	e4f1	55	46.154	ENSOMEG00000010078	-	85	46.154
ENSOMEG00000012220	e4f1	60	42.105	ENSOMEG00000010068	-	59	42.105
ENSOMEG00000012220	e4f1	64	39.521	ENSOMEG00000008449	-	99	43.750
ENSOMEG00000012220	e4f1	56	43.023	ENSOMEG00000022975	-	61	43.023
ENSOMEG00000012220	e4f1	56	41.379	ENSOMEG00000000630	-	76	41.892
ENSOMEG00000012220	e4f1	59	39.759	ENSOMEG00000012539	-	93	41.026
ENSOMEG00000012220	e4f1	63	38.750	ENSOMEG00000019336	-	97	43.421
ENSOMEG00000012220	e4f1	52	38.750	ENSOMEG00000020951	-	87	38.750
ENSOMEG00000012220	e4f1	57	41.053	ENSOMEG00000023331	-	99	41.053
ENSOMEG00000012220	e4f1	67	42.500	ENSOMEG00000015103	-	98	42.500
ENSOMEG00000012220	e4f1	57	38.824	ENSOMEG00000009243	-	58	39.521
ENSOMEG00000012220	e4f1	58	39.474	ENSOMEG00000016779	-	98	39.474
ENSOMEG00000012220	e4f1	71	38.931	ENSOMEG00000015669	znf574	87	38.931
ENSOMEG00000012220	e4f1	57	41.333	ENSOMEG00000021676	-	99	41.333
ENSOMEG00000012220	e4f1	54	43.023	ENSOMEG00000005143	prdm5	55	43.210
ENSOMEG00000012220	e4f1	63	42.424	ENSOMEG00000015591	-	80	42.424
ENSOMEG00000012220	e4f1	67	42.373	ENSOMEG00000012844	-	99	44.737
ENSOMEG00000012220	e4f1	51	39.080	ENSOMEG00000020893	-	97	40.000
ENSOMEG00000012220	e4f1	57	44.800	ENSOMEG00000009071	-	96	44.800
ENSOMEG00000012220	e4f1	78	37.333	ENSOMEG00000021903	-	62	37.333
ENSOMEG00000012220	e4f1	55	46.753	ENSOMEG00000023652	-	99	46.753
ENSOMEG00000012220	e4f1	86	41.250	ENSOMEG00000009568	-	97	43.662
ENSOMEG00000012220	e4f1	63	37.059	ENSOMEG00000020870	-	94	37.059
ENSOMEG00000012220	e4f1	58	38.272	ENSOMEG00000010300	-	83	38.272
ENSOMEG00000012220	e4f1	63	42.500	ENSOMEG00000012621	-	92	41.250
ENSOMEG00000012220	e4f1	51	42.177	ENSOMEG00000011876	-	68	42.177
ENSOMEG00000012220	e4f1	65	41.250	ENSOMEG00000013158	-	78	41.250
ENSOMEG00000012220	e4f1	59	36.000	ENSOMEG00000017673	-	73	37.662
ENSOMEG00000012220	e4f1	51	40.123	ENSOMEG00000013842	-	85	40.123
ENSOMEG00000012220	e4f1	68	40.000	ENSOMEG00000018691	-	95	43.284
ENSOMEG00000012220	e4f1	61	48.148	ENSOMEG00000018262	-	94	47.500
ENSOMEG00000012220	e4f1	60	38.272	ENSOMEG00000000829	-	74	38.272
ENSOMEG00000012220	e4f1	60	40.000	ENSOMEG00000014973	-	99	37.500
ENSOMEG00000012220	e4f1	69	42.105	ENSOMEG00000002639	-	99	42.105
ENSOMEG00000012220	e4f1	54	41.791	ENSOMEG00000007495	-	80	42.105
ENSOMEG00000012220	e4f1	65	34.161	ENSOMEG00000021420	-	60	42.169
ENSOMEG00000012220	e4f1	68	36.441	ENSOMEG00000006301	-	87	36.441
ENSOMEG00000012220	e4f1	58	40.741	ENSOMEG00000003451	-	67	40.741
ENSOMEG00000012220	e4f1	64	40.449	ENSOMEG00000010371	-	99	45.455

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000012220	e4f1	100	70.303	ENSCSEG00000015852	e4f1	98	69.212	Cynoglossus_semilaevis
ENSOMEG00000012220	e4f1	100	74.118	ENSCVAG00000002788	e4f1	100	74.118	Cyprinodon_variegatus
ENSOMEG00000012220	e4f1	99	71.919	ENSFHEG00000022551	e4f1	97	72.497	Fundulus_heteroclitus
ENSOMEG00000012220	e4f1	82	65.512	ENSGMOG00000011409	e4f1	95	65.938	Gadus_morhua
ENSOMEG00000012220	e4f1	100	73.438	ENSGACG00000011808	e4f1	100	74.479	Gasterosteus_aculeatus
ENSOMEG00000012220	e4f1	100	67.266	ENSHCOG00000016455	e4f1	100	66.795	Hippocampus_comes
ENSOMEG00000012220	e4f1	100	53.368	ENSIPUG00000005379	e4f1	99	53.558	Ictalurus_punctatus
ENSOMEG00000012220	e4f1	100	76.190	ENSLBEG00000026373	e4f1	100	76.834	Labrus_bergylta
ENSOMEG00000012220	e4f1	100	68.750	ENSMMOG00000007612	e4f1	100	69.401	Mola_mola
ENSOMEG00000012220	e4f1	100	74.710	ENSMALG00000007314	e4f1	100	75.355	Monopterus_albus
ENSOMEG00000012220	e4f1	100	92.257	ENSORLG00000009160	e4f1	100	92.651	Oryzias_latipes
ENSOMEG00000012220	e4f1	100	88.832	ENSORLG00020017974	e4f1	100	89.848	Oryzias_latipes_hni
ENSOMEG00000012220	e4f1	100	93.553	ENSORLG00015007385	e4f1	100	93.947	Oryzias_latipes_hsok
ENSOMEG00000012220	e4f1	100	55.400	ENSPKIG00000001942	e4f1	99	55.856	Paramormyrops_kingsleyae
ENSOMEG00000012220	e4f1	91	85.859	ENSPMGG00000020527	e4f1	90	87.671	Periophthalmus_magnuspinnatus
ENSOMEG00000012220	e4f1	99	53.473	ENSSFOG00015021291	e4f1	99	52.618	Scleropages_formosus
ENSOMEG00000012220	e4f1	100	76.973	ENSSMAG00000014720	e4f1	100	77.490	Scophthalmus_maximus
ENSOMEG00000012220	e4f1	96	47.650	ENSSPUG00000011420	E4F1	94	47.854	Sphenodon_punctatus
ENSOMEG00000012220	e4f1	100	68.931	ENSTRUG00000005176	e4f1	100	70.477	Takifugu_rubripes
ENSOMEG00000012220	e4f1	96	69.057	ENSTNIG00000018001	e4f1	100	69.987	Tetraodon_nigroviridis
ENSOMEG00000012220	e4f1	61	68.142	ENSXETG00000016091	e4f1	99	68.142	Xenopus_tropicalis