EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000012368 (Gene tree)
Gene ID: 112146495
Gene Symbol: -
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein A0-like
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 1544 bases
Position: chrNVQA01000010.1:11008971-11010514
Accession: 112146495
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000011067	RRM_1	PF00076.22	5e-46	1	3
ENSOMEP00000011067	RRM_1	PF00076.22	5e-46	2	3
ENSOMEP00000011067	RRM_1	PF00076.22	5e-46	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000018046	-	1544	XM_024272351	ENSOMEP00000011067	476 (aa)	XP_024128119	UPI000CF833CC

Gene Model

Click here to download ENSOMEG00000012368's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000012368's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000012368	-	99	73.305	ENSOMEG00000002000	-	99	73.517
ENSOMEG00000012368	-	54	44.156	ENSOMEG00000023772	hnrnpabb	72	44.156
ENSOMEG00000012368	-	100	89.813	ENSOMEG00000006903	-	100	89.813
ENSOMEG00000012368	-	73	48.851	ENSOMEG00000004838	hnrnpa3	84	41.132
ENSOMEG00000012368	-	54	42.105	ENSOMEG00000005936	hnrnpaba	73	41.463
ENSOMEG00000012368	-	61	42.667	ENSOMEG00000018558	hnrnpd	71	42.667
ENSOMEG00000012368	-	68	94.083	ENSOMEG00000009566	-	87	94.083
ENSOMEG00000012368	-	66	37.430	ENSOMEG00000002272	-	55	37.288
ENSOMEG00000012368	-	70	36.709	ENSOMEG00000017536	MSI1	64	36.158
ENSOMEG00000012368	-	56	36.082	ENSOMEG00000021469	cirbpa	80	36.000
ENSOMEG00000012368	-	65	64.062	ENSOMEG00000002091	-	90	59.898
ENSOMEG00000012368	-	95	90.969	ENSOMEG00000021030	-	100	90.969
ENSOMEG00000012368	-	100	92.857	ENSOMEG00000023475	-	100	92.857
ENSOMEG00000012368	-	79	75.676	ENSOMEG00000002084	-	71	75.676
ENSOMEG00000012368	-	96	93.450	ENSOMEG00000002509	-	99	93.450
ENSOMEG00000012368	-	81	42.045	ENSOMEG00000003120	dazap1	64	42.045
ENSOMEG00000012368	-	82	67.262	ENSOMEG00000011670	-	96	67.262
ENSOMEG00000012368	-	95	91.080	ENSOMEG00000006327	-	97	91.080
ENSOMEG00000012368	-	68	50.273	ENSOMEG00000015959	-	81	44.444
ENSOMEG00000012368	-	86	68.837	ENSOMEG00000013637	-	100	69.406
ENSOMEG00000012368	-	87	36.364	ENSOMEG00000000146	msi2a	88	36.364

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000012368	-	66	57.222	ENSAOCG00000015914	-	66	56.684	Amphiprion_ocellaris
ENSOMEG00000012368	-	69	65.644	ENSAOCG00000015951	-	96	65.644	Amphiprion_ocellaris
ENSOMEG00000012368	-	67	57.222	ENSAPEG00000002224	-	85	54.464	Amphiprion_percula
ENSOMEG00000012368	-	69	65.644	ENSAPEG00000002274	-	96	65.644	Amphiprion_percula
ENSOMEG00000012368	-	67	57.778	ENSACLG00000008978	-	83	57.065	Astatotilapia_calliptera
ENSOMEG00000012368	-	67	57.778	ENSCVAG00000008324	-	91	51.818	Cyprinodon_variegatus
ENSOMEG00000012368	-	69	44.571	FBgn0001215	Hrb98DE	92	40.756	Drosophila_melanogaster
ENSOMEG00000012368	-	60	37.086	ENSEBUG00000010003	-	87	37.086	Eptatretus_burgeri
ENSOMEG00000012368	-	68	58.434	ENSELUG00000014407	-	98	58.434	Esox_lucius
ENSOMEG00000012368	-	67	57.778	ENSHBUG00000023867	-	83	57.065	Haplochromis_burtoni
ENSOMEG00000012368	-	69	55.556	ENSHCOG00000007180	-	97	49.174	Hippocampus_comes
ENSOMEG00000012368	-	67	54.167	ENSLBEG00000006362	-	79	54.167	Labrus_bergylta
ENSOMEG00000012368	-	64	56.452	ENSLOCG00000012121	-	66	56.452	Lepisosteus_oculatus
ENSOMEG00000012368	-	67	55.000	ENSMAMG00000017728	-	70	54.545	Mastacembelus_armatus
ENSOMEG00000012368	-	67	57.778	ENSMZEG00005001063	-	82	57.065	Maylandia_zebra
ENSOMEG00000012368	-	68	61.212	ENSMMOG00000004242	-	98	61.585	Mola_mola
ENSOMEG00000012368	-	76	41.379	ENSMEUG00000003051	-	84	36.719	Notamacropus_eugenii
ENSOMEG00000012368	-	84	64.171	ENSORLG00000023176	-	99	50.355	Oryzias_latipes
ENSOMEG00000012368	-	82	66.286	ENSORLG00000023542	-	96	52.124	Oryzias_latipes
ENSOMEG00000012368	-	79	50.694	ENSORLG00000030284	-	69	59.574	Oryzias_latipes
ENSOMEG00000012368	-	81	66.860	ENSORLG00020006029	-	95	52.734	Oryzias_latipes_hni
ENSOMEG00000012368	-	67	55.682	ENSORLG00020007171	-	97	55.682	Oryzias_latipes_hni
ENSOMEG00000012368	-	72	64.242	ENSORLG00020007084	-	78	64.242	Oryzias_latipes_hni
ENSOMEG00000012368	-	74	57.778	ENSPREG00000010603	-	70	53.153	Poecilia_reticulata
ENSOMEG00000012368	-	67	57.778	ENSPNYG00000020763	-	83	57.065	Pundamilia_nyererei
ENSOMEG00000012368	-	68	56.875	ENSPNAG00000018051	-	79	56.875	Pygocentrus_nattereri
ENSOMEG00000012368	-	70	53.757	ENSSHAG00000015609	-	100	48.000	Sarcophilus_harrisii
ENSOMEG00000012368	-	67	54.167	ENSSDUG00000002394	-	87	54.167	Seriola_dumerili
ENSOMEG00000012368	-	66	66.447	ENSSLDG00000024685	-	85	66.447	Seriola_lalandi_dorsalis