EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOMEG00000012376 (Gene tree)
Gene ID: 112148804
Gene Symbol: srrm4
Alias: -
Full Name: serine/arginine repetitive matrix 4
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 71674 bases
Position: chrNVQA01000012.1:24100935-24172608
Accession: 112148804
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000011089	SRRM_C	PF15230.6	2.3e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000018074	-	2854	-	ENSOMEP00000011089	603 (aa)	XP_024131927	UPI000CF811D6

Gene Model

Click here to download ENSOMEG00000012376's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000012376's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000012376	srrm4	100	64.377	ENSAPOG00000010969	srrm4	100	66.933	Acanthochromis_polyacanthus
ENSOMEG00000012376	srrm4	100	64.650	ENSAOCG00000019891	srrm4	100	67.197	Amphiprion_ocellaris
ENSOMEG00000012376	srrm4	100	64.241	ENSAPEG00000011132	srrm4	91	66.958	Amphiprion_percula
ENSOMEG00000012376	srrm4	59	43.164	ENSDARG00000086327	srrm4	86	42.582	Danio_rerio
ENSOMEG00000012376	srrm4	51	61.290	ENSELUG00000004986	srrm4	88	50.000	Esox_lucius
ENSOMEG00000012376	srrm4	100	64.148	ENSHBUG00000010505	srrm4	100	65.391	Haplochromis_burtoni
ENSOMEG00000012376	srrm4	91	60.354	ENSKMAG00000001873	srrm4	100	62.520	Kryptolebias_marmoratus
ENSOMEG00000012376	srrm4	88	60.073	ENSLBEG00000008471	srrm4	64	64.179	Labrus_bergylta
ENSOMEG00000012376	srrm4	89	59.353	ENSMALG00000001422	srrm4	96	61.905	Monopterus_albus
ENSOMEG00000012376	srrm4	99	62.480	ENSONIG00000010552	srrm4	99	65.978	Oreochromis_niloticus
ENSOMEG00000012376	srrm4	54	90.244	ENSORLG00000001177	srrm4	86	90.244	Oryzias_latipes
ENSOMEG00000012376	srrm4	75	82.121	ENSORLG00020009749	srrm4	84	90.769	Oryzias_latipes_hni
ENSOMEG00000012376	srrm4	62	92.500	ENSORLG00015019143	srrm4	85	92.500	Oryzias_latipes_hsok
ENSOMEG00000012376	srrm4	61	58.718	ENSPFOG00000014600	srrm4	87	58.701	Poecilia_formosa
ENSOMEG00000012376	srrm4	83	41.887	ENSPNAG00000010426	srrm4	85	39.775	Pygocentrus_nattereri
ENSOMEG00000012376	srrm4	55	58.571	ENSSPAG00000016190	srrm4	59	78.169	Stegastes_partitus
ENSOMEG00000012376	srrm4	91	62.435	ENSXMAG00000002658	srrm4	99	63.968	Xiphophorus_maculatus