EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOMEG00000012396 (Gene tree)
Gene ID: 112136118
Gene Symbol: ptcd2
Alias: -
Full Name: pentatricopeptide repeat domain 2
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 3289 bases
Position: chrNVQA01000031.1:7339416-7342704
Accession: ZDB-GENE-050417-82
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000011110	MRP-S27	PF10037.9	1.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000032187	-	1441	-	ENSOMEP00000011110	411 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000012396's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000012396's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000012396	ptcd2	87	44.199	ENSG00000049883	PTCD2	100	40.394	Homo_sapiens
ENSOMEG00000012396	ptcd2	93	69.974	ENSAPOG00000020682	ptcd2	100	69.974	Acanthochromis_polyacanthus
ENSOMEG00000012396	ptcd2	84	43.353	ENSAMEG00000007194	PTCD2	89	43.353	Ailuropoda_melanoleuca
ENSOMEG00000012396	ptcd2	84	66.379	ENSACIG00000002053	ptcd2	100	66.379	Amphilophus_citrinellus
ENSOMEG00000012396	ptcd2	95	71.026	ENSAOCG00000006616	ptcd2	100	71.026	Amphiprion_ocellaris
ENSOMEG00000012396	ptcd2	95	71.026	ENSAPEG00000022926	ptcd2	100	71.026	Amphiprion_percula
ENSOMEG00000012396	ptcd2	87	48.189	ENSACAG00000009747	PTCD2	92	48.189	Anolis_carolinensis
ENSOMEG00000012396	ptcd2	92	42.257	ENSANAG00000029353	PTCD2	93	42.257	Aotus_nancymaae
ENSOMEG00000012396	ptcd2	95	73.077	ENSACLG00000027742	ptcd2	100	73.077	Astatotilapia_calliptera
ENSOMEG00000012396	ptcd2	87	48.876	ENSAMXG00000029404	ptcd2	95	48.876	Astyanax_mexicanus
ENSOMEG00000012396	ptcd2	84	45.665	ENSBTAG00000014675	PTCD2	90	45.665	Bos_taurus
ENSOMEG00000012396	ptcd2	92	41.470	ENSCJAG00000016364	PTCD2	93	41.470	Callithrix_jacchus
ENSOMEG00000012396	ptcd2	93	44.186	ENSCAFG00000007982	PTCD2	90	44.186	Canis_familiaris
ENSOMEG00000012396	ptcd2	84	45.821	ENSCAFG00020019147	PTCD2	97	45.821	Canis_lupus_dingo
ENSOMEG00000012396	ptcd2	90	43.617	ENSCHIG00000017118	PTCD2	96	43.617	Capra_hircus
ENSOMEG00000012396	ptcd2	87	44.199	ENSCPOG00000040168	PTCD2	95	44.199	Cavia_porcellus
ENSOMEG00000012396	ptcd2	66	45.387	ENSCCAG00000021996	-	83	45.387	Cebus_capucinus
ENSOMEG00000012396	ptcd2	84	44.509	ENSCCAG00000029389	-	89	44.509	Cebus_capucinus
ENSOMEG00000012396	ptcd2	90	44.385	ENSCATG00000019069	PTCD2	98	44.385	Cercocebus_atys
ENSOMEG00000012396	ptcd2	95	40.909	ENSCLAG00000000072	PTCD2	99	40.909	Chinchilla_lanigera
ENSOMEG00000012396	ptcd2	84	45.954	ENSCSAG00000015623	PTCD2	94	44.847	Chlorocebus_sabaeus
ENSOMEG00000012396	ptcd2	62	49.412	ENSCHOG00000010634	PTCD2	73	49.412	Choloepus_hoffmanni
ENSOMEG00000012396	ptcd2	95	43.257	ENSCPBG00000000216	PTCD2	100	43.257	Chrysemys_picta_bellii
ENSOMEG00000012396	ptcd2	87	45.304	ENSCANG00000035636	PTCD2	93	45.304	Colobus_angolensis_palliatus
ENSOMEG00000012396	ptcd2	84	45.665	ENSCGRG00001015289	Ptcd2	76	45.665	Cricetulus_griseus_chok1gshd
ENSOMEG00000012396	ptcd2	84	45.665	ENSCGRG00000006193	Ptcd2	76	45.665	Cricetulus_griseus_crigri
ENSOMEG00000012396	ptcd2	95	71.795	ENSCVAG00000001285	ptcd2	100	71.795	Cyprinodon_variegatus
ENSOMEG00000012396	ptcd2	84	51.734	ENSDARG00000035391	ptcd2	90	51.734	Danio_rerio
ENSOMEG00000012396	ptcd2	86	43.733	ENSDNOG00000008719	PTCD2	94	43.733	Dasypus_novemcinctus
ENSOMEG00000012396	ptcd2	90	43.122	ENSDORG00000004921	Ptcd2	98	43.122	Dipodomys_ordii
ENSOMEG00000012396	ptcd2	87	42.541	ENSETEG00000016542	PTCD2	93	42.541	Echinops_telfairi
ENSOMEG00000012396	ptcd2	84	45.665	ENSEASG00005018038	PTCD2	91	45.665	Equus_asinus_asinus
ENSOMEG00000012396	ptcd2	84	45.665	ENSECAG00000007022	PTCD2	89	45.665	Equus_caballus
ENSOMEG00000012396	ptcd2	87	45.152	ENSEEUG00000014031	PTCD2	93	45.152	Erinaceus_europaeus
ENSOMEG00000012396	ptcd2	90	60.541	ENSELUG00000003584	ptcd2	97	60.541	Esox_lucius
ENSOMEG00000012396	ptcd2	76	45.079	ENSFCAG00000045432	PTCD2	74	45.079	Felis_catus
ENSOMEG00000012396	ptcd2	79	42.508	ENSFALG00000010299	PTCD2	99	42.508	Ficedula_albicollis
ENSOMEG00000012396	ptcd2	84	43.642	ENSFDAG00000018461	PTCD2	90	43.642	Fukomys_damarensis
ENSOMEG00000012396	ptcd2	93	60.622	ENSGMOG00000003637	ptcd2	100	60.622	Gadus_morhua
ENSOMEG00000012396	ptcd2	86	42.373	ENSGALG00000038260	PTCD2	93	42.373	Gallus_gallus
ENSOMEG00000012396	ptcd2	95	47.328	ENSGAGG00000021952	PTCD2	100	47.328	Gopherus_agassizii
ENSOMEG00000012396	ptcd2	87	44.199	ENSGGOG00000010695	PTCD2	93	44.199	Gorilla_gorilla
ENSOMEG00000012396	ptcd2	95	72.564	ENSHBUG00000009191	ptcd2	100	72.564	Haplochromis_burtoni
ENSOMEG00000012396	ptcd2	87	44.444	ENSHGLG00000001234	PTCD2	94	44.444	Heterocephalus_glaber_female
ENSOMEG00000012396	ptcd2	87	44.444	ENSHGLG00100015419	PTCD2	94	44.444	Heterocephalus_glaber_male
ENSOMEG00000012396	ptcd2	92	63.947	ENSHCOG00000001703	ptcd2	99	63.947	Hippocampus_comes
ENSOMEG00000012396	ptcd2	85	52.676	ENSIPUG00000006080	ptcd2	99	52.116	Ictalurus_punctatus
ENSOMEG00000012396	ptcd2	84	44.092	ENSSTOG00000006596	PTCD2	91	44.092	Ictidomys_tridecemlineatus
ENSOMEG00000012396	ptcd2	86	44.598	ENSJJAG00000024388	Ptcd2	94	44.598	Jaculus_jaculus
ENSOMEG00000012396	ptcd2	91	60.000	ENSKMAG00000009329	ptcd2	98	60.000	Kryptolebias_marmoratus
ENSOMEG00000012396	ptcd2	95	66.154	ENSLBEG00000024871	ptcd2	99	66.154	Labrus_bergylta
ENSOMEG00000012396	ptcd2	91	52.660	ENSLOCG00000011122	ptcd2	98	52.660	Lepisosteus_oculatus
ENSOMEG00000012396	ptcd2	66	50.183	ENSLAFG00000004115	PTCD2	93	48.958	Loxodonta_africana
ENSOMEG00000012396	ptcd2	90	45.067	ENSMFAG00000031516	PTCD2	96	45.067	Macaca_fascicularis
ENSOMEG00000012396	ptcd2	87	45.304	ENSMNEG00000007537	PTCD2	94	45.304	Macaca_nemestrina
ENSOMEG00000012396	ptcd2	90	44.533	ENSMLEG00000031093	PTCD2	96	44.533	Mandrillus_leucophaeus
ENSOMEG00000012396	ptcd2	91	72.000	ENSMAMG00000018529	ptcd2	98	72.000	Mastacembelus_armatus
ENSOMEG00000012396	ptcd2	95	73.077	ENSMZEG00005003625	ptcd2	100	73.077	Maylandia_zebra
ENSOMEG00000012396	ptcd2	84	43.678	ENSMGAG00000005033	PTCD2	100	43.678	Meleagris_gallopavo
ENSOMEG00000012396	ptcd2	86	36.066	ENSMAUG00000020253	Ptcd2	93	36.066	Mesocricetus_auratus
ENSOMEG00000012396	ptcd2	92	42.147	ENSMICG00000004535	PTCD2	93	42.147	Microcebus_murinus
ENSOMEG00000012396	ptcd2	86	44.167	ENSMOCG00000019985	Ptcd2	94	44.167	Microtus_ochrogaster
ENSOMEG00000012396	ptcd2	91	43.421	ENSMODG00000001695	PTCD2	99	43.421	Monodelphis_domestica
ENSOMEG00000012396	ptcd2	93	69.452	ENSMALG00000022372	ptcd2	100	69.452	Monopterus_albus
ENSOMEG00000012396	ptcd2	86	43.056	MGP_CAROLIEiJ_G0018829	Ptcd2	94	43.056	Mus_caroli
ENSOMEG00000012396	ptcd2	86	42.500	ENSMUSG00000021650	Ptcd2	94	42.500	Mus_musculus
ENSOMEG00000012396	ptcd2	86	44.722	MGP_PahariEiJ_G0015904	Ptcd2	94	44.722	Mus_pahari
ENSOMEG00000012396	ptcd2	86	43.056	MGP_SPRETEiJ_G0019711	Ptcd2	94	43.056	Mus_spretus
ENSOMEG00000012396	ptcd2	97	41.500	ENSMPUG00000014401	PTCD2	98	41.500	Mustela_putorius_furo
ENSOMEG00000012396	ptcd2	84	44.220	ENSMLUG00000007374	PTCD2	93	43.175	Myotis_lucifugus
ENSOMEG00000012396	ptcd2	86	43.454	ENSNGAG00000005027	Ptcd2	94	43.454	Nannospalax_galili
ENSOMEG00000012396	ptcd2	80	70.517	ENSNBRG00000000092	-	100	70.517	Neolamprologus_brichardi
ENSOMEG00000012396	ptcd2	93	73.629	ENSNBRG00000008174	ptcd2	100	73.629	Neolamprologus_brichardi
ENSOMEG00000012396	ptcd2	87	43.646	ENSNLEG00000004516	PTCD2	93	43.646	Nomascus_leucogenys
ENSOMEG00000012396	ptcd2	55	58.282	ENSMEUG00000014012	-	62	57.059	Notamacropus_eugenii
ENSOMEG00000012396	ptcd2	84	43.642	ENSOPRG00000007290	PTCD2	89	43.642	Ochotona_princeps
ENSOMEG00000012396	ptcd2	84	46.243	ENSODEG00000016417	PTCD2	90	46.243	Octodon_degus
ENSOMEG00000012396	ptcd2	82	73.512	ENSONIG00000011269	ptcd2	98	73.512	Oreochromis_niloticus
ENSOMEG00000012396	ptcd2	84	44.798	ENSOCUG00000007970	PTCD2	90	44.798	Oryctolagus_cuniculus
ENSOMEG00000012396	ptcd2	95	88.205	ENSORLG00000003851	ptcd2	100	88.205	Oryzias_latipes
ENSOMEG00000012396	ptcd2	93	87.728	ENSORLG00020009823	ptcd2	100	87.728	Oryzias_latipes_hni
ENSOMEG00000012396	ptcd2	84	84.393	ENSORLG00015016777	ptcd2	99	84.393	Oryzias_latipes_hsok
ENSOMEG00000012396	ptcd2	89	44.591	ENSOGAG00000008390	PTCD2	98	44.591	Otolemur_garnettii
ENSOMEG00000012396	ptcd2	90	43.883	ENSOARG00000005087	PTCD2	94	43.883	Ovis_aries
ENSOMEG00000012396	ptcd2	87	44.199	ENSPPAG00000028480	PTCD2	93	44.199	Pan_paniscus
ENSOMEG00000012396	ptcd2	87	43.923	ENSPTRG00000016968	PTCD2	93	43.923	Pan_troglodytes
ENSOMEG00000012396	ptcd2	84	45.797	ENSPANG00000006611	PTCD2	89	45.797	Papio_anubis
ENSOMEG00000012396	ptcd2	84	53.890	ENSPKIG00000019896	ptcd2	90	53.890	Paramormyrops_kingsleyae
ENSOMEG00000012396	ptcd2	77	48.113	ENSPSIG00000014559	PTCD2	98	48.113	Pelodiscus_sinensis
ENSOMEG00000012396	ptcd2	84	45.690	ENSPEMG00000000884	Ptcd2	91	45.690	Peromyscus_maniculatus_bairdii
ENSOMEG00000012396	ptcd2	93	45.876	ENSPCIG00000029047	PTCD2	100	45.876	Phascolarctos_cinereus
ENSOMEG00000012396	ptcd2	93	68.146	ENSPLAG00000010456	ptcd2	100	68.146	Poecilia_latipinna
ENSOMEG00000012396	ptcd2	93	68.668	ENSPREG00000021797	ptcd2	98	68.668	Poecilia_reticulata
ENSOMEG00000012396	ptcd2	87	39.227	ENSPPYG00000015543	PTCD2	92	39.227	Pongo_abelii
ENSOMEG00000012396	ptcd2	66	43.015	ENSPCAG00000006806	PTCD2	87	43.015	Procavia_capensis
ENSOMEG00000012396	ptcd2	84	44.798	ENSPVAG00000010935	PTCD2	89	44.798	Pteropus_vampyrus
ENSOMEG00000012396	ptcd2	95	73.077	ENSPNYG00000003122	ptcd2	100	73.077	Pundamilia_nyererei
ENSOMEG00000012396	ptcd2	91	58.421	ENSPNAG00000021490	ptcd2	99	58.421	Pygocentrus_nattereri
ENSOMEG00000012396	ptcd2	89	43.750	ENSRNOG00000028403	Ptcd2	97	43.750	Rattus_norvegicus
ENSOMEG00000012396	ptcd2	87	41.713	ENSRBIG00000032929	PTCD2	93	41.713	Rhinopithecus_bieti
ENSOMEG00000012396	ptcd2	87	45.304	ENSRROG00000000080	PTCD2	94	45.304	Rhinopithecus_roxellana
ENSOMEG00000012396	ptcd2	92	42.257	ENSSBOG00000018911	PTCD2	94	42.257	Saimiri_boliviensis_boliviensis
ENSOMEG00000012396	ptcd2	84	45.087	ENSSHAG00000003833	PTCD2	89	45.087	Sarcophilus_harrisii
ENSOMEG00000012396	ptcd2	88	53.425	ENSSFOG00015015415	ptcd2	95	53.425	Scleropages_formosus
ENSOMEG00000012396	ptcd2	92	61.155	ENSSMAG00000010350	ptcd2	99	61.155	Scophthalmus_maximus
ENSOMEG00000012396	ptcd2	97	68.593	ENSSDUG00000008142	ptcd2	99	68.593	Seriola_dumerili
ENSOMEG00000012396	ptcd2	93	69.452	ENSSLDG00000015284	ptcd2	100	69.452	Seriola_lalandi_dorsalis
ENSOMEG00000012396	ptcd2	84	45.087	ENSSPUG00000000176	PTCD2	87	45.087	Sphenodon_punctatus
ENSOMEG00000012396	ptcd2	95	64.615	ENSSPAG00000008591	ptcd2	100	64.615	Stegastes_partitus
ENSOMEG00000012396	ptcd2	87	44.321	ENSSSCG00000016975	PTCD2	85	44.321	Sus_scrofa
ENSOMEG00000012396	ptcd2	83	45.481	ENSTGUG00000005705	PTCD2	99	45.481	Taeniopygia_guttata
ENSOMEG00000012396	ptcd2	84	43.353	ENSTBEG00000016559	PTCD2	89	43.353	Tupaia_belangeri
ENSOMEG00000012396	ptcd2	84	45.217	ENSTTRG00000011851	PTCD2	89	45.217	Tursiops_truncatus
ENSOMEG00000012396	ptcd2	84	43.353	ENSUAMG00000007583	PTCD2	81	43.353	Ursus_americanus
ENSOMEG00000012396	ptcd2	87	42.659	ENSUMAG00000007666	PTCD2	94	42.659	Ursus_maritimus
ENSOMEG00000012396	ptcd2	96	40.500	ENSVPAG00000009597	PTCD2	97	40.500	Vicugna_pacos
ENSOMEG00000012396	ptcd2	84	45.665	ENSVVUG00000007299	-	98	41.061	Vulpes_vulpes
ENSOMEG00000012396	ptcd2	93	43.041	ENSXETG00000031652	PTCD2	100	43.041	Xenopus_tropicalis
ENSOMEG00000012396	ptcd2	97	66.165	ENSXMAG00000005940	ptcd2	95	66.165	Xiphophorus_maculatus