EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000012445 (Gene tree)
Gene ID: 112160509
Gene Symbol: ddx28
Alias: -
Full Name: DEAD-box helicase 28
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 1683 bases
Position: chrNVQA01000027.1:12168683-12170365
Accession: 112160509
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000011157	ResIII	PF04851.15	2.4e-05	1	1
ENSOMEP00000011157	DEAD	PF00270.29	2.1e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000018157	-	1683	-	ENSOMEP00000011157	560 (aa)	XP_024150850	UPI000CF834D7

Gene Model

Click here to download ENSOMEG00000012445's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000012445's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000012445	ddx28	68	30.155	ENSOMEG00000008354	ddx5	58	30.155
ENSOMEG00000012445	ddx28	68	30.026	ENSOMEG00000006456	-	98	30.026
ENSOMEG00000012445	ddx28	71	30.273	ENSOMEG00000023418	ddx43	58	30.273
ENSOMEG00000012445	ddx28	66	31.347	ENSOMEG00000023619	ddx55	61	31.347
ENSOMEG00000012445	ddx28	68	31.088	ENSOMEG00000009020	DDX41	59	31.088
ENSOMEG00000012445	ddx28	72	32.010	ENSOMEG00000008065	ddx47	77	32.010
ENSOMEG00000012445	ddx28	70	30.846	ENSOMEG00000006411	-	60	30.846

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000012445	ddx28	90	49.027	ENSG00000182810	DDX28	94	49.027	Homo_sapiens
ENSOMEG00000012445	ddx28	100	75.442	ENSAPOG00000000991	ddx28	98	75.442	Acanthochromis_polyacanthus
ENSOMEG00000012445	ddx28	90	49.123	ENSAMEG00000019426	DDX28	94	49.123	Ailuropoda_melanoleuca
ENSOMEG00000012445	ddx28	100	73.063	ENSACIG00000021615	ddx28	100	73.063	Amphilophus_citrinellus
ENSOMEG00000012445	ddx28	100	75.221	ENSAOCG00000004610	ddx28	98	75.221	Amphiprion_ocellaris
ENSOMEG00000012445	ddx28	100	75.221	ENSAPEG00000002143	ddx28	98	75.221	Amphiprion_percula
ENSOMEG00000012445	ddx28	100	75.088	ENSATEG00000018691	ddx28	100	75.088	Anabas_testudineus
ENSOMEG00000012445	ddx28	91	46.214	ENSACAG00000009755	DDX28	94	46.214	Anolis_carolinensis
ENSOMEG00000012445	ddx28	100	70.370	ENSACLG00000012984	ddx28	100	70.370	Astatotilapia_calliptera
ENSOMEG00000012445	ddx28	100	61.005	ENSAMXG00000005878	ddx28	99	61.005	Astyanax_mexicanus
ENSOMEG00000012445	ddx28	90	49.516	ENSBTAG00000004290	DDX28	93	49.516	Bos_taurus
ENSOMEG00000012445	ddx28	89	48.617	ENSCAFG00000020327	DDX28	94	48.617	Canis_familiaris
ENSOMEG00000012445	ddx28	89	48.617	ENSCAFG00020019785	DDX28	94	48.617	Canis_lupus_dingo
ENSOMEG00000012445	ddx28	90	49.807	ENSCHIG00000009658	DDX28	93	49.807	Capra_hircus
ENSOMEG00000012445	ddx28	96	47.145	ENSCPOG00000013746	DDX28	99	47.145	Cavia_porcellus
ENSOMEG00000012445	ddx28	92	47.519	ENSCSAG00000018472	DDX28	94	47.519	Chlorocebus_sabaeus
ENSOMEG00000012445	ddx28	85	49.687	ENSCPBG00000012105	DDX28	85	49.687	Chrysemys_picta_bellii
ENSOMEG00000012445	ddx28	64	36.066	ENSCSAVG00000006341	-	94	36.066	Ciona_savignyi
ENSOMEG00000012445	ddx28	88	48.008	ENSCGRG00001024412	Ddx28	94	48.008	Cricetulus_griseus_chok1gshd
ENSOMEG00000012445	ddx28	99	66.608	ENSCSEG00000011651	ddx28	99	66.608	Cynoglossus_semilaevis
ENSOMEG00000012445	ddx28	99	72.535	ENSCVAG00000004044	ddx28	100	72.535	Cyprinodon_variegatus
ENSOMEG00000012445	ddx28	100	61.268	ENSDARG00000060411	ddx28	99	61.268	Danio_rerio
ENSOMEG00000012445	ddx28	64	54.348	ENSDNOG00000033593	DDX28	98	54.348	Dasypus_novemcinctus
ENSOMEG00000012445	ddx28	90	47.276	ENSDORG00000028868	Ddx28	94	47.573	Dipodomys_ordii
ENSOMEG00000012445	ddx28	80	36.184	FBgn0086130	Dbp21E2	88	35.497	Drosophila_melanogaster
ENSOMEG00000012445	ddx28	91	49.516	ENSETEG00000001062	-	94	49.516	Echinops_telfairi
ENSOMEG00000012445	ddx28	74	43.617	ENSEBUG00000004791	ddx28	83	41.667	Eptatretus_burgeri
ENSOMEG00000012445	ddx28	90	47.969	ENSEASG00005020387	DDX28	98	47.398	Equus_asinus_asinus
ENSOMEG00000012445	ddx28	90	48.356	ENSECAG00000006451	DDX28	98	47.770	Equus_caballus
ENSOMEG00000012445	ddx28	73	43.780	ENSEEUG00000005017	DDX28	96	43.780	Erinaceus_europaeus
ENSOMEG00000012445	ddx28	99	62.877	ENSELUG00000005302	ddx28	98	66.344	Esox_lucius
ENSOMEG00000012445	ddx28	90	48.733	ENSFCAG00000012858	DDX28	94	48.733	Felis_catus
ENSOMEG00000012445	ddx28	99	71.226	ENSFHEG00000012573	ddx28	99	71.226	Fundulus_heteroclitus
ENSOMEG00000012445	ddx28	90	69.336	ENSGMOG00000017045	ddx28	96	69.336	Gadus_morhua
ENSOMEG00000012445	ddx28	90	43.561	ENSGALG00000048700	DDX28	90	44.173	Gallus_gallus
ENSOMEG00000012445	ddx28	99	72.890	ENSGAFG00000009249	ddx28	99	72.890	Gambusia_affinis
ENSOMEG00000012445	ddx28	92	74.231	ENSGACG00000016367	ddx28	96	74.231	Gasterosteus_aculeatus
ENSOMEG00000012445	ddx28	76	48.951	ENSGAGG00000004565	DDX28	93	48.951	Gopherus_agassizii
ENSOMEG00000012445	ddx28	90	49.222	ENSGGOG00000001220	DDX28	94	49.222	Gorilla_gorilla
ENSOMEG00000012445	ddx28	100	73.545	ENSHBUG00000001016	ddx28	100	73.545	Haplochromis_burtoni
ENSOMEG00000012445	ddx28	100	66.667	ENSHCOG00000017590	ddx28	99	66.667	Hippocampus_comes
ENSOMEG00000012445	ddx28	98	58.741	ENSIPUG00000017350	Ddx28	98	58.741	Ictalurus_punctatus
ENSOMEG00000012445	ddx28	94	49.815	ENSSTOG00000002064	DDX28	98	49.815	Ictidomys_tridecemlineatus
ENSOMEG00000012445	ddx28	94	47.556	ENSJJAG00000012460	-	97	47.556	Jaculus_jaculus
ENSOMEG00000012445	ddx28	100	72.134	ENSKMAG00000018183	ddx28	100	72.134	Kryptolebias_marmoratus
ENSOMEG00000012445	ddx28	99	73.227	ENSLBEG00000006072	ddx28	99	73.227	Labrus_bergylta
ENSOMEG00000012445	ddx28	97	54.909	ENSLACG00000005578	DDX28	94	54.909	Latimeria_chalumnae
ENSOMEG00000012445	ddx28	94	59.404	ENSLOCG00000017604	ddx28	95	59.404	Lepisosteus_oculatus
ENSOMEG00000012445	ddx28	90	49.708	ENSLAFG00000031239	DDX28	94	49.708	Loxodonta_africana
ENSOMEG00000012445	ddx28	92	47.519	ENSMMUG00000010836	DDX28	94	47.519	Macaca_mulatta
ENSOMEG00000012445	ddx28	99	71.886	ENSMAMG00000020220	ddx28	99	71.886	Mastacembelus_armatus
ENSOMEG00000012445	ddx28	100	73.721	ENSMZEG00005009292	ddx28	100	73.721	Maylandia_zebra
ENSOMEG00000012445	ddx28	90	39.804	ENSMICG00000012346	-	93	39.804	Microcebus_murinus
ENSOMEG00000012445	ddx28	90	48.638	ENSMOCG00000009815	Ddx28	94	48.638	Microtus_ochrogaster
ENSOMEG00000012445	ddx28	93	72.222	ENSMMOG00000000270	ddx28	94	72.222	Mola_mola
ENSOMEG00000012445	ddx28	92	48.752	ENSMODG00000005303	DDX28	99	47.263	Monodelphis_domestica
ENSOMEG00000012445	ddx28	100	72.056	ENSMALG00000008864	ddx28	100	72.056	Monopterus_albus
ENSOMEG00000012445	ddx28	90	47.276	MGP_CAROLIEiJ_G0031510	Ddx28	94	47.276	Mus_caroli
ENSOMEG00000012445	ddx28	90	47.471	ENSMUSG00000045538	Ddx28	94	47.471	Mus_musculus
ENSOMEG00000012445	ddx28	90	47.471	MGP_PahariEiJ_G0023110	Ddx28	94	47.471	Mus_pahari
ENSOMEG00000012445	ddx28	90	47.767	MGP_SPRETEiJ_G0032628	Ddx28	94	47.767	Mus_spretus
ENSOMEG00000012445	ddx28	70	49.370	ENSMPUG00000006915	DDX28	98	49.370	Mustela_putorius_furo
ENSOMEG00000012445	ddx28	91	48.549	ENSMLUG00000005899	DDX28	94	48.549	Myotis_lucifugus
ENSOMEG00000012445	ddx28	90	48.932	ENSNGAG00000015762	Ddx28	94	49.126	Nannospalax_galili
ENSOMEG00000012445	ddx28	99	74.597	ENSNBRG00000001337	ddx28	100	74.597	Neolamprologus_brichardi
ENSOMEG00000012445	ddx28	99	74.419	ENSONIG00000020597	ddx28	99	74.419	Oreochromis_niloticus
ENSOMEG00000012445	ddx28	90	49.805	ENSOCUG00000023074	DDX28	94	49.805	Oryctolagus_cuniculus
ENSOMEG00000012445	ddx28	100	87.344	ENSORLG00000011968	ddx28	100	87.344	Oryzias_latipes
ENSOMEG00000012445	ddx28	99	87.681	ENSORLG00020001951	ddx28	99	87.681	Oryzias_latipes_hni
ENSOMEG00000012445	ddx28	99	87.319	ENSORLG00015023030	ddx28	99	87.319	Oryzias_latipes_hsok
ENSOMEG00000012445	ddx28	90	49.320	ENSOGAG00000016895	DDX28	94	49.516	Otolemur_garnettii
ENSOMEG00000012445	ddx28	79	48.115	ENSOARG00000003313	DDX28	99	48.115	Ovis_aries
ENSOMEG00000012445	ddx28	90	46.693	ENSPPAG00000036971	DDX28	93	46.693	Pan_paniscus
ENSOMEG00000012445	ddx28	90	49.123	ENSPPRG00000018322	DDX28	94	49.123	Panthera_pardus
ENSOMEG00000012445	ddx28	90	47.173	ENSPTIG00000006444	DDX28	94	47.173	Panthera_tigris_altaica
ENSOMEG00000012445	ddx28	90	49.027	ENSPTRG00000008258	DDX28	94	49.027	Pan_troglodytes
ENSOMEG00000012445	ddx28	94	63.128	ENSPKIG00000021200	ddx28	98	63.128	Paramormyrops_kingsleyae
ENSOMEG00000012445	ddx28	97	66.062	ENSPMGG00000007908	ddx28	97	66.062	Periophthalmus_magnuspinnatus
ENSOMEG00000012445	ddx28	90	47.481	ENSPEMG00000003395	Ddx28	94	47.481	Peromyscus_maniculatus_bairdii
ENSOMEG00000012445	ddx28	100	73.274	ENSPFOG00000020952	ddx28	99	73.274	Poecilia_formosa
ENSOMEG00000012445	ddx28	100	73.274	ENSPFOG00000020838	DDX28	100	73.274	Poecilia_formosa
ENSOMEG00000012445	ddx28	100	72.566	ENSPLAG00000016292	ddx28	99	72.566	Poecilia_latipinna
ENSOMEG00000012445	ddx28	100	73.451	ENSPMEG00000011311	ddx28	98	73.451	Poecilia_mexicana
ENSOMEG00000012445	ddx28	100	73.451	ENSPREG00000002899	ddx28	99	73.451	Poecilia_reticulata
ENSOMEG00000012445	ddx28	90	48.932	ENSPPYG00000007481	DDX28	94	48.932	Pongo_abelii
ENSOMEG00000012445	ddx28	90	48.833	ENSPCOG00000024632	DDX28	94	48.833	Propithecus_coquereli
ENSOMEG00000012445	ddx28	100	73.721	ENSPNYG00000018804	ddx28	100	73.721	Pundamilia_nyererei
ENSOMEG00000012445	ddx28	91	62.857	ENSPNAG00000014597	ddx28	96	62.857	Pygocentrus_nattereri
ENSOMEG00000012445	ddx28	90	47.082	ENSRNOG00000019817	Ddx28	94	47.082	Rattus_norvegicus
ENSOMEG00000012445	ddx28	98	61.649	ENSSFOG00015010181	ddx28	99	61.649	Scleropages_formosus
ENSOMEG00000012445	ddx28	91	75.439	ENSSMAG00000006831	ddx28	96	75.439	Scophthalmus_maximus
ENSOMEG00000012445	ddx28	99	75.133	ENSSDUG00000003257	ddx28	99	75.133	Seriola_dumerili
ENSOMEG00000012445	ddx28	99	74.165	ENSSLDG00000004513	ddx28	99	74.165	Seriola_lalandi_dorsalis
ENSOMEG00000012445	ddx28	90	48.450	ENSSARG00000014169	DDX28	95	48.664	Sorex_araneus
ENSOMEG00000012445	ddx28	100	73.805	ENSSPAG00000000988	ddx28	100	73.805	Stegastes_partitus
ENSOMEG00000012445	ddx28	90	48.833	ENSSSCG00000026038	DDX28	94	48.833	Sus_scrofa
ENSOMEG00000012445	ddx28	91	72.638	ENSTRUG00000007815	ddx28	92	72.638	Takifugu_rubripes
ENSOMEG00000012445	ddx28	90	71.315	ENSTNIG00000011352	ddx28	99	71.315	Tetraodon_nigroviridis
ENSOMEG00000012445	ddx28	76	60.563	ENSTBEG00000017695	DDX28	78	60.563	Tupaia_belangeri
ENSOMEG00000012445	ddx28	90	48.538	ENSUAMG00000016116	DDX28	94	48.538	Ursus_americanus
ENSOMEG00000012445	ddx28	77	50.228	ENSUMAG00000019200	DDX28	88	50.228	Ursus_maritimus
ENSOMEG00000012445	ddx28	73	43.750	ENSVVUG00000012876	DDX28	81	43.750	Vulpes_vulpes
ENSOMEG00000012445	ddx28	88	45.749	ENSXETG00000005435	ddx28	96	45.749	Xenopus_tropicalis
ENSOMEG00000012445	ddx28	99	73.703	ENSXCOG00000012364	ddx28	98	73.703	Xiphophorus_couchianus
ENSOMEG00000012445	ddx28	91	77.104	ENSXMAG00000019603	ddx28	92	77.104	Xiphophorus_maculatus