EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000012749 (Gene tree)
Gene ID: 112151417
Gene Symbol: shrprbck1r
Alias: -
Full Name: ranBP-type and C3HC4-type zinc finger-containing protein 1-like
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 8807 bases
Position: chrNVQA01000015.1:11387806-11396612
Accession: 112151417
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000029231	zf-RanBP	PF00641.18	2.4e-06	1	1
ENSOMEP00000011432	zf-RanBP	PF00641.18	2.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000018494	-	3869	XM_024280363	ENSOMEP00000029231	709 (aa)	XP_024136131	UPI000CF81048
ENSOMET00000018513	-	3938	-	ENSOMEP00000011432	732 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000012749's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000012749's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000012749	shrprbck1r	50	74.074	ENSOMEG00000005729	sharpin	87	74.074

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000012749	shrprbck1r	100	81.285	ENSAPOG00000022737	shrprbck1r	100	81.285	Acanthochromis_polyacanthus
ENSOMEG00000012749	shrprbck1r	60	56.164	ENSAPOG00000023352	sharpin	95	56.164	Acanthochromis_polyacanthus
ENSOMEG00000012749	shrprbck1r	100	80.731	ENSACIG00000002184	shrprbck1r	100	80.731	Amphilophus_citrinellus
ENSOMEG00000012749	shrprbck1r	100	83.848	ENSAOCG00000002890	shrprbck1r	100	83.848	Amphiprion_ocellaris
ENSOMEG00000012749	shrprbck1r	60	56.393	ENSAOCG00000017464	sharpin	95	56.393	Amphiprion_ocellaris
ENSOMEG00000012749	shrprbck1r	60	56.393	ENSAPEG00000004049	sharpin	95	56.393	Amphiprion_percula
ENSOMEG00000012749	shrprbck1r	100	81.487	ENSAPEG00000023274	shrprbck1r	100	81.487	Amphiprion_percula
ENSOMEG00000012749	shrprbck1r	60	57.596	ENSATEG00000007832	sharpin	88	57.596	Anabas_testudineus
ENSOMEG00000012749	shrprbck1r	100	77.918	ENSATEG00000014561	shrprbck1r	100	78.340	Anabas_testudineus
ENSOMEG00000012749	shrprbck1r	100	79.747	ENSACLG00000022609	shrprbck1r	100	80.309	Astatotilapia_calliptera
ENSOMEG00000012749	shrprbck1r	55	56.041	ENSAMXG00000006229	sharpin	97	55.270	Astyanax_mexicanus
ENSOMEG00000012749	shrprbck1r	100	69.074	ENSAMXG00000021016	shrprbck1r	100	69.589	Astyanax_mexicanus
ENSOMEG00000012749	shrprbck1r	100	74.157	ENSCSEG00000011306	shrprbck1r	100	74.438	Cynoglossus_semilaevis
ENSOMEG00000012749	shrprbck1r	59	55.164	ENSCVAG00000006586	sharpin	95	55.164	Cyprinodon_variegatus
ENSOMEG00000012749	shrprbck1r	100	80.113	ENSCVAG00000007250	shrprbck1r	100	80.113	Cyprinodon_variegatus
ENSOMEG00000012749	shrprbck1r	55	54.359	ENSDARG00000076995	sharpin	94	54.359	Danio_rerio
ENSOMEG00000012749	shrprbck1r	100	70.458	ENSDARG00000059871	shrprbck1r	100	70.596	Danio_rerio
ENSOMEG00000012749	shrprbck1r	100	73.147	ENSELUG00000016022	shrprbck1r	100	73.147	Esox_lucius
ENSOMEG00000012749	shrprbck1r	59	55.349	ENSFHEG00000013564	sharpin	94	55.349	Fundulus_heteroclitus
ENSOMEG00000012749	shrprbck1r	51	60.121	ENSGMOG00000010123	sharpin	91	60.121	Gadus_morhua
ENSOMEG00000012749	shrprbck1r	55	45.780	ENSGAFG00000021405	sharpin	95	44.000	Gambusia_affinis
ENSOMEG00000012749	shrprbck1r	100	79.972	ENSGAFG00000009309	shrprbck1r	100	79.972	Gambusia_affinis
ENSOMEG00000012749	shrprbck1r	75	77.966	ENSGACG00000002544	shrprbck1r	99	77.966	Gasterosteus_aculeatus
ENSOMEG00000012749	shrprbck1r	100	80.169	ENSHBUG00000021933	shrprbck1r	100	80.365	Haplochromis_burtoni
ENSOMEG00000012749	shrprbck1r	60	51.765	ENSHCOG00000018847	sharpin	80	52.582	Hippocampus_comes
ENSOMEG00000012749	shrprbck1r	54	54.337	ENSIPUG00000011951	sharpin	95	88.462	Ictalurus_punctatus
ENSOMEG00000012749	shrprbck1r	96	68.940	ENSIPUG00000014247	shrprbck1r	95	68.940	Ictalurus_punctatus
ENSOMEG00000012749	shrprbck1r	100	78.860	ENSKMAG00000015215	shrprbck1r	100	78.562	Kryptolebias_marmoratus
ENSOMEG00000012749	shrprbck1r	60	56.944	ENSKMAG00000015204	sharpin	76	56.944	Kryptolebias_marmoratus
ENSOMEG00000012749	shrprbck1r	60	57.014	ENSLBEG00000016624	sharpin	96	57.014	Labrus_bergylta
ENSOMEG00000012749	shrprbck1r	100	79.577	ENSLBEG00000016876	shrprbck1r	100	80.282	Labrus_bergylta
ENSOMEG00000012749	shrprbck1r	95	53.285	ENSLACG00000010948	-	97	53.285	Latimeria_chalumnae
ENSOMEG00000012749	shrprbck1r	100	67.268	ENSLOCG00000008910	shrprbck1r	100	67.268	Lepisosteus_oculatus
ENSOMEG00000012749	shrprbck1r	50	70.968	ENSMAMG00000014645	sharpin	95	70.968	Mastacembelus_armatus
ENSOMEG00000012749	shrprbck1r	100	78.169	ENSMAMG00000022930	shrprbck1r	100	78.451	Mastacembelus_armatus
ENSOMEG00000012749	shrprbck1r	100	79.606	ENSMZEG00005021257	shrprbck1r	100	80.169	Maylandia_zebra
ENSOMEG00000012749	shrprbck1r	100	76.731	ENSMMOG00000003764	shrprbck1r	100	77.019	Mola_mola
ENSOMEG00000012749	shrprbck1r	50	70.968	ENSMALG00000020528	sharpin	96	70.968	Monopterus_albus
ENSOMEG00000012749	shrprbck1r	96	79.823	ENSMALG00000008861	shrprbck1r	95	79.823	Monopterus_albus
ENSOMEG00000012749	shrprbck1r	100	80.169	ENSNBRG00000002270	shrprbck1r	100	80.731	Neolamprologus_brichardi
ENSOMEG00000012749	shrprbck1r	100	79.747	ENSONIG00000014401	shrprbck1r	100	80.309	Oreochromis_niloticus
ENSOMEG00000012749	shrprbck1r	55	53.511	ENSONIG00000009626	-	97	53.511	Oreochromis_niloticus
ENSOMEG00000012749	shrprbck1r	100	93.935	ENSORLG00000007392	shrprbck1r	100	93.935	Oryzias_latipes
ENSOMEG00000012749	shrprbck1r	60	55.809	ENSORLG00000017281	sharpin	95	55.809	Oryzias_latipes
ENSOMEG00000012749	shrprbck1r	100	93.230	ENSORLG00020018619	shrprbck1r	100	93.230	Oryzias_latipes_hni
ENSOMEG00000012749	shrprbck1r	60	55.708	ENSORLG00020000801	sharpin	95	55.708	Oryzias_latipes_hni
ENSOMEG00000012749	shrprbck1r	100	93.230	ENSORLG00015018865	shrprbck1r	100	93.230	Oryzias_latipes_hsok
ENSOMEG00000012749	shrprbck1r	60	55.936	ENSORLG00015009860	sharpin	95	55.936	Oryzias_latipes_hsok
ENSOMEG00000012749	shrprbck1r	100	70.432	ENSPKIG00000006933	shrprbck1r	100	70.432	Paramormyrops_kingsleyae
ENSOMEG00000012749	shrprbck1r	65	59.534	ENSPKIG00000018308	-	96	59.534	Paramormyrops_kingsleyae
ENSOMEG00000012749	shrprbck1r	100	75.211	ENSPMGG00000013254	shrprbck1r	100	75.211	Periophthalmus_magnuspinnatus
ENSOMEG00000012749	shrprbck1r	59	54.460	ENSPFOG00000015253	sharpin	95	54.460	Poecilia_formosa
ENSOMEG00000012749	shrprbck1r	100	80.677	ENSPFOG00000004214	shrprbck1r	100	80.677	Poecilia_formosa
ENSOMEG00000012749	shrprbck1r	59	54.695	ENSPLAG00000000423	sharpin	95	54.695	Poecilia_latipinna
ENSOMEG00000012749	shrprbck1r	100	80.536	ENSPLAG00000020523	shrprbck1r	100	80.536	Poecilia_latipinna
ENSOMEG00000012749	shrprbck1r	100	78.622	ENSPMEG00000006877	shrprbck1r	100	78.622	Poecilia_mexicana
ENSOMEG00000012749	shrprbck1r	100	77.856	ENSPREG00000014689	shrprbck1r	100	77.856	Poecilia_reticulata
ENSOMEG00000012749	shrprbck1r	59	54.907	ENSPREG00000009702	sharpin	95	54.907	Poecilia_reticulata
ENSOMEG00000012749	shrprbck1r	100	80.028	ENSPNYG00000022601	shrprbck1r	100	80.591	Pundamilia_nyererei
ENSOMEG00000012749	shrprbck1r	100	68.363	ENSPNAG00000007847	shrprbck1r	100	68.349	Pygocentrus_nattereri
ENSOMEG00000012749	shrprbck1r	55	54.756	ENSPNAG00000002911	sharpin	99	54.103	Pygocentrus_nattereri
ENSOMEG00000012749	shrprbck1r	63	52.449	ENSSFOG00015004028	sharpin	99	52.800	Scleropages_formosus
ENSOMEG00000012749	shrprbck1r	75	64.419	ENSSFOG00015014150	-	96	64.419	Scleropages_formosus
ENSOMEG00000012749	shrprbck1r	100	77.747	ENSSMAG00000018085	shrprbck1r	100	77.747	Scophthalmus_maximus
ENSOMEG00000012749	shrprbck1r	60	42.634	ENSSDUG00000019039	sharpin	96	42.634	Seriola_dumerili
ENSOMEG00000012749	shrprbck1r	100	82.113	ENSSDUG00000002959	shrprbck1r	100	82.817	Seriola_dumerili
ENSOMEG00000012749	shrprbck1r	100	81.690	ENSSLDG00000009026	shrprbck1r	100	82.394	Seriola_lalandi_dorsalis
ENSOMEG00000012749	shrprbck1r	96	79.971	ENSSPAG00000016097	shrprbck1r	99	79.971	Stegastes_partitus
ENSOMEG00000012749	shrprbck1r	100	76.685	ENSTRUG00000006949	shrprbck1r	100	77.528	Takifugu_rubripes
ENSOMEG00000012749	shrprbck1r	60	49.885	ENSTRUG00000011046	sharpin	96	49.886	Takifugu_rubripes
ENSOMEG00000012749	shrprbck1r	55	53.865	ENSTNIG00000008521	sharpin	94	53.865	Tetraodon_nigroviridis
ENSOMEG00000012749	shrprbck1r	50	66.667	ENSXCOG00000015019	sharpin	95	68.750	Xiphophorus_couchianus
ENSOMEG00000012749	shrprbck1r	100	76.197	ENSXCOG00000006701	shrprbck1r	100	76.197	Xiphophorus_couchianus
ENSOMEG00000012749	shrprbck1r	100	75.915	ENSXMAG00000018972	shrprbck1r	100	75.915	Xiphophorus_maculatus
ENSOMEG00000012749	shrprbck1r	59	54.801	ENSXMAG00000022076	sharpin	95	54.801	Xiphophorus_maculatus