EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000012865 (Gene tree)
Gene ID: 112154295
Gene Symbol: polr3a
Alias: -
Full Name: polymerase (RNA) III (DNA directed) polypeptide A
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 18896 bases
Position: chrNVQA01000018.1:10057357-10076252
Accession: ZDB-GENE-050208-103
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000011505	RNA_pol_Rpb1_5	PF04998.17	2.3e-88	1	1
ENSOMEP00000011505	RNA_pol_Rpb1_4	PF05000.17	3.6e-32	1	1
ENSOMEP00000011505	RNA_pol_Rpb1_2	PF00623.20	5.7e-73	1	1
ENSOMEP00000011505	RNA_pol_Rpb1_3	PF04983.18	1.9e-39	1	1
ENSOMEP00000011505	RNA_pol_Rpb1_1	PF04997.12	8e-93	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000018589	-	4140	-	ENSOMEP00000011505	1379 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000012865's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000012865's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000012865	polr3a	91	38.386	ENSOMEG00000010713	polr2a	84	38.310

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000012865	polr3a	100	88.921	ENSG00000148606	POLR3A	98	93.038	Homo_sapiens
ENSOMEG00000012865	polr3a	62	92.102	ENSAPOG00000022727	polr3a	99	92.102	Acanthochromis_polyacanthus
ENSOMEG00000012865	polr3a	100	88.658	ENSAMEG00000017801	POLR3A	100	88.658	Ailuropoda_melanoleuca
ENSOMEG00000012865	polr3a	93	95.385	ENSACIG00000024504	polr3a	97	95.385	Amphilophus_citrinellus
ENSOMEG00000012865	polr3a	100	95.396	ENSAOCG00000002071	polr3a	100	95.396	Amphiprion_ocellaris
ENSOMEG00000012865	polr3a	100	92.086	ENSAOCG00000003949	-	100	92.086	Amphiprion_ocellaris
ENSOMEG00000012865	polr3a	100	95.396	ENSAPEG00000013351	polr3a	100	95.396	Amphiprion_percula
ENSOMEG00000012865	polr3a	100	95.180	ENSAPEG00000001966	-	100	95.180	Amphiprion_percula
ENSOMEG00000012865	polr3a	100	95.180	ENSATEG00000023277	polr3a	100	95.180	Anabas_testudineus
ENSOMEG00000012865	polr3a	99	89.745	ENSAPLG00000015878	POLR3A	99	89.745	Anas_platyrhynchos
ENSOMEG00000012865	polr3a	93	88.464	ENSACAG00000007985	POLR3A	99	88.464	Anolis_carolinensis
ENSOMEG00000012865	polr3a	100	86.422	ENSANAG00000028922	POLR3A	96	93.631	Aotus_nancymaae
ENSOMEG00000012865	polr3a	100	95.036	ENSACLG00000005914	polr3a	100	95.036	Astatotilapia_calliptera
ENSOMEG00000012865	polr3a	99	88.473	ENSAMXG00000018852	polr3a	99	88.473	Astyanax_mexicanus
ENSOMEG00000012865	polr3a	100	88.849	ENSBTAG00000013259	POLR3A	100	88.849	Bos_taurus
ENSOMEG00000012865	polr3a	98	56.322	WBGene00004411	rpc-1	99	56.322	Caenorhabditis_elegans
ENSOMEG00000012865	polr3a	100	88.777	ENSCJAG00000001015	POLR3A	96	93.038	Callithrix_jacchus
ENSOMEG00000012865	polr3a	100	88.849	ENSCAFG00000015546	POLR3A	100	88.849	Canis_familiaris
ENSOMEG00000012865	polr3a	100	88.849	ENSCAFG00020014711	POLR3A	100	88.849	Canis_lupus_dingo
ENSOMEG00000012865	polr3a	100	88.561	ENSCHIG00000000352	POLR3A	100	88.561	Capra_hircus
ENSOMEG00000012865	polr3a	100	88.417	ENSTSYG00000006671	POLR3A	100	88.417	Carlito_syrichta
ENSOMEG00000012865	polr3a	99	88.873	ENSCAPG00000016031	POLR3A	100	88.873	Cavia_aperea
ENSOMEG00000012865	polr3a	100	88.921	ENSCPOG00000022387	POLR3A	100	88.921	Cavia_porcellus
ENSOMEG00000012865	polr3a	100	87.338	ENSCCAG00000032995	POLR3A	96	93.038	Cebus_capucinus
ENSOMEG00000012865	polr3a	100	88.921	ENSCATG00000035842	POLR3A	98	93.038	Cercocebus_atys
ENSOMEG00000012865	polr3a	100	88.921	ENSCLAG00000009629	POLR3A	100	88.921	Chinchilla_lanigera
ENSOMEG00000012865	polr3a	100	88.921	ENSCSAG00000009292	POLR3A	100	88.921	Chlorocebus_sabaeus
ENSOMEG00000012865	polr3a	81	80.087	ENSCHOG00000008368	POLR3A	95	80.087	Choloepus_hoffmanni
ENSOMEG00000012865	polr3a	99	89.561	ENSCPBG00000002079	POLR3A	99	89.561	Chrysemys_picta_bellii
ENSOMEG00000012865	polr3a	99	67.867	ENSCSAVG00000009925	-	99	67.867	Ciona_savignyi
ENSOMEG00000012865	polr3a	86	84.221	ENSCANG00000041071	POLR3A	98	92.405	Colobus_angolensis_palliatus
ENSOMEG00000012865	polr3a	78	90.385	ENSCGRG00001015599	-	92	90.385	Cricetulus_griseus_chok1gshd
ENSOMEG00000012865	polr3a	89	87.879	ENSCGRG00000001019	Polr3a	100	87.879	Cricetulus_griseus_crigri
ENSOMEG00000012865	polr3a	100	94.892	ENSCSEG00000016653	polr3a	100	94.892	Cynoglossus_semilaevis
ENSOMEG00000012865	polr3a	100	94.748	ENSCVAG00000023049	polr3a	100	94.748	Cyprinodon_variegatus
ENSOMEG00000012865	polr3a	99	91.282	ENSDARG00000102569	polr3a	99	91.282	Danio_rerio
ENSOMEG00000012865	polr3a	100	88.129	ENSDNOG00000010194	POLR3A	100	88.129	Dasypus_novemcinctus
ENSOMEG00000012865	polr3a	100	88.705	ENSDORG00000000184	Polr3a	100	88.705	Dipodomys_ordii
ENSOMEG00000012865	polr3a	99	56.408	FBgn0030687	CG17209	99	56.408	Drosophila_melanogaster
ENSOMEG00000012865	polr3a	83	89.879	ENSETEG00000007477	POLR3A	84	89.879	Echinops_telfairi
ENSOMEG00000012865	polr3a	59	74.795	ENSEBUG00000013761	polr3a	98	74.795	Eptatretus_burgeri
ENSOMEG00000012865	polr3a	100	88.849	ENSEASG00005023053	POLR3A	100	88.849	Equus_asinus_asinus
ENSOMEG00000012865	polr3a	97	89.046	ENSECAG00000019416	POLR3A	100	88.629	Equus_caballus
ENSOMEG00000012865	polr3a	96	84.340	ENSEEUG00000001774	POLR3A	100	84.340	Erinaceus_europaeus
ENSOMEG00000012865	polr3a	100	90.165	ENSELUG00000014016	polr3a	100	90.165	Esox_lucius
ENSOMEG00000012865	polr3a	100	88.993	ENSFCAG00000000843	POLR3A	100	88.993	Felis_catus
ENSOMEG00000012865	polr3a	100	89.432	ENSFALG00000006913	POLR3A	100	89.432	Ficedula_albicollis
ENSOMEG00000012865	polr3a	100	89.209	ENSFDAG00000007813	POLR3A	100	89.209	Fukomys_damarensis
ENSOMEG00000012865	polr3a	100	88.397	ENSFHEG00000011922	polr3a	100	88.397	Fundulus_heteroclitus
ENSOMEG00000012865	polr3a	100	87.368	ENSGMOG00000000291	polr3a	99	87.368	Gadus_morhua
ENSOMEG00000012865	polr3a	100	89.784	ENSGALG00000004947	POLR3A	100	89.784	Gallus_gallus
ENSOMEG00000012865	polr3a	100	94.676	ENSGAFG00000005112	polr3a	100	94.676	Gambusia_affinis
ENSOMEG00000012865	polr3a	100	93.309	ENSGACG00000002304	polr3a	100	93.309	Gasterosteus_aculeatus
ENSOMEG00000012865	polr3a	95	89.478	ENSGAGG00000010386	POLR3A	98	89.478	Gopherus_agassizii
ENSOMEG00000012865	polr3a	99	87.861	ENSGGOG00000027729	POLR3A	98	93.038	Gorilla_gorilla
ENSOMEG00000012865	polr3a	100	95.036	ENSHBUG00000018098	polr3a	100	95.036	Haplochromis_burtoni
ENSOMEG00000012865	polr3a	100	89.137	ENSHGLG00000017899	POLR3A	100	89.137	Heterocephalus_glaber_female
ENSOMEG00000012865	polr3a	100	89.137	ENSHGLG00100008483	POLR3A	100	89.137	Heterocephalus_glaber_male
ENSOMEG00000012865	polr3a	100	94.101	ENSHCOG00000001075	polr3a	100	94.101	Hippocampus_comes
ENSOMEG00000012865	polr3a	100	88.921	ENSSTOG00000012983	POLR3A	100	88.921	Ictidomys_tridecemlineatus
ENSOMEG00000012865	polr3a	100	94.964	ENSKMAG00000015290	polr3a	100	94.964	Kryptolebias_marmoratus
ENSOMEG00000012865	polr3a	99	93.377	ENSLBEG00000017214	polr3a	99	93.377	Labrus_bergylta
ENSOMEG00000012865	polr3a	97	87.286	ENSLACG00000018557	POLR3A	99	87.286	Latimeria_chalumnae
ENSOMEG00000012865	polr3a	100	91.744	ENSLOCG00000004942	polr3a	100	91.744	Lepisosteus_oculatus
ENSOMEG00000012865	polr3a	100	87.563	ENSLAFG00000016719	POLR3A	100	87.563	Loxodonta_africana
ENSOMEG00000012865	polr3a	100	88.849	ENSMFAG00000032218	POLR3A	96	93.038	Macaca_fascicularis
ENSOMEG00000012865	polr3a	100	88.849	ENSMMUG00000005514	POLR3A	98	93.038	Macaca_mulatta
ENSOMEG00000012865	polr3a	99	82.487	ENSMNEG00000035163	POLR3A	99	88.167	Macaca_nemestrina
ENSOMEG00000012865	polr3a	100	85.252	ENSMLEG00000030014	POLR3A	98	93.038	Mandrillus_leucophaeus
ENSOMEG00000012865	polr3a	100	94.676	ENSMAMG00000017497	polr3a	100	94.676	Mastacembelus_armatus
ENSOMEG00000012865	polr3a	100	95.036	ENSMZEG00005000576	polr3a	100	95.036	Maylandia_zebra
ENSOMEG00000012865	polr3a	100	73.523	ENSMGAG00000005713	-	100	73.523	Meleagris_gallopavo
ENSOMEG00000012865	polr3a	100	86.835	ENSMAUG00000016247	Polr3a	100	86.835	Mesocricetus_auratus
ENSOMEG00000012865	polr3a	100	88.921	ENSMICG00000005937	POLR3A	100	89.574	Microcebus_murinus
ENSOMEG00000012865	polr3a	100	88.921	ENSMOCG00000012185	Polr3a	100	88.921	Microtus_ochrogaster
ENSOMEG00000012865	polr3a	100	94.801	ENSMMOG00000013822	polr3a	100	94.801	Mola_mola
ENSOMEG00000012865	polr3a	100	88.633	ENSMODG00000001036	POLR3A	100	88.633	Monodelphis_domestica
ENSOMEG00000012865	polr3a	100	94.604	ENSMALG00000001249	polr3a	100	94.604	Monopterus_albus
ENSOMEG00000012865	polr3a	100	88.921	MGP_CAROLIEiJ_G0019016	Polr3a	100	88.921	Mus_caroli
ENSOMEG00000012865	polr3a	100	88.921	ENSMUSG00000025280	Polr3a	100	88.921	Mus_musculus
ENSOMEG00000012865	polr3a	100	88.849	MGP_PahariEiJ_G0030029	Polr3a	100	88.849	Mus_pahari
ENSOMEG00000012865	polr3a	100	86.331	MGP_SPRETEiJ_G0019894	Polr3a	97	97.000	Mus_spretus
ENSOMEG00000012865	polr3a	100	88.231	ENSMPUG00000003790	POLR3A	100	88.231	Mustela_putorius_furo
ENSOMEG00000012865	polr3a	100	87.842	ENSMLUG00000011522	POLR3A	100	87.842	Myotis_lucifugus
ENSOMEG00000012865	polr3a	100	87.554	ENSNGAG00000015863	Polr3a	100	87.554	Nannospalax_galili
ENSOMEG00000012865	polr3a	100	93.022	ENSNBRG00000014262	polr3a	100	93.022	Neolamprologus_brichardi
ENSOMEG00000012865	polr3a	88	81.508	ENSNLEG00000010501	POLR3A	92	81.508	Nomascus_leucogenys
ENSOMEG00000012865	polr3a	99	76.291	ENSMEUG00000012446	POLR3A	100	76.291	Notamacropus_eugenii
ENSOMEG00000012865	polr3a	100	84.173	ENSOPRG00000001880	-	100	84.173	Ochotona_princeps
ENSOMEG00000012865	polr3a	100	88.561	ENSODEG00000015146	POLR3A	100	88.561	Octodon_degus
ENSOMEG00000012865	polr3a	100	95.324	ENSONIG00000016129	polr3a	100	95.324	Oreochromis_niloticus
ENSOMEG00000012865	polr3a	98	88.167	ENSOANG00000007013	POLR3A	100	88.167	Ornithorhynchus_anatinus
ENSOMEG00000012865	polr3a	100	88.777	ENSOCUG00000012450	POLR3A	100	88.777	Oryctolagus_cuniculus
ENSOMEG00000012865	polr3a	100	97.482	ENSORLG00000008958	polr3a	100	97.482	Oryzias_latipes
ENSOMEG00000012865	polr3a	100	95.252	ENSORLG00020007525	polr3a	98	97.392	Oryzias_latipes_hni
ENSOMEG00000012865	polr3a	100	97.626	ENSORLG00015006633	polr3a	100	97.626	Oryzias_latipes_hsok
ENSOMEG00000012865	polr3a	100	88.705	ENSOGAG00000010995	POLR3A	100	88.705	Otolemur_garnettii
ENSOMEG00000012865	polr3a	100	88.506	ENSOARG00000009656	POLR3A	100	88.506	Ovis_aries
ENSOMEG00000012865	polr3a	100	88.993	ENSPPRG00000002128	POLR3A	100	88.993	Panthera_pardus
ENSOMEG00000012865	polr3a	100	88.993	ENSPTIG00000020916	POLR3A	100	88.993	Panthera_tigris_altaica
ENSOMEG00000012865	polr3a	100	88.993	ENSPTRG00000002664	POLR3A	98	93.038	Pan_troglodytes
ENSOMEG00000012865	polr3a	100	88.849	ENSPANG00000022508	POLR3A	98	93.038	Papio_anubis
ENSOMEG00000012865	polr3a	100	91.727	ENSPKIG00000008140	polr3a	100	92.267	Paramormyrops_kingsleyae
ENSOMEG00000012865	polr3a	98	89.408	ENSPSIG00000002092	POLR3A	100	89.408	Pelodiscus_sinensis
ENSOMEG00000012865	polr3a	100	88.705	ENSPEMG00000006768	Polr3a	100	88.705	Peromyscus_maniculatus_bairdii
ENSOMEG00000012865	polr3a	100	88.561	ENSPCIG00000015842	POLR3A	100	88.561	Phascolarctos_cinereus
ENSOMEG00000012865	polr3a	54	97.047	ENSPFOG00000006458	polr3a	100	97.047	Poecilia_formosa
ENSOMEG00000012865	polr3a	100	95.108	ENSPLAG00000000997	polr3a	100	95.108	Poecilia_latipinna
ENSOMEG00000012865	polr3a	100	95.036	ENSPMEG00000006821	polr3a	100	95.036	Poecilia_mexicana
ENSOMEG00000012865	polr3a	100	94.964	ENSPREG00000002385	polr3a	100	94.964	Poecilia_reticulata
ENSOMEG00000012865	polr3a	93	88.613	ENSPPYG00000002305	POLR3A	99	88.613	Pongo_abelii
ENSOMEG00000012865	polr3a	85	78.626	ENSPCAG00000005690	POLR3A	87	78.626	Procavia_capensis
ENSOMEG00000012865	polr3a	100	88.777	ENSPCOG00000028311	POLR3A	100	88.777	Propithecus_coquereli
ENSOMEG00000012865	polr3a	100	87.410	ENSPVAG00000015553	POLR3A	100	87.410	Pteropus_vampyrus
ENSOMEG00000012865	polr3a	100	94.964	ENSPNYG00000020987	polr3a	100	94.964	Pundamilia_nyererei
ENSOMEG00000012865	polr3a	99	87.608	ENSPNAG00000006629	polr3a	99	87.608	Pygocentrus_nattereri
ENSOMEG00000012865	polr3a	100	88.849	ENSRNOG00000010008	Polr3a	100	88.849	Rattus_norvegicus
ENSOMEG00000012865	polr3a	100	85.396	ENSRBIG00000034967	POLR3A	98	93.038	Rhinopithecus_bieti
ENSOMEG00000012865	polr3a	100	88.849	ENSRROG00000025527	POLR3A	98	93.038	Rhinopithecus_roxellana
ENSOMEG00000012865	polr3a	98	49.272	YOR116C	RPO31	98	49.272	Saccharomyces_cerevisiae
ENSOMEG00000012865	polr3a	100	88.849	ENSSBOG00000022199	POLR3A	100	88.849	Saimiri_boliviensis_boliviensis
ENSOMEG00000012865	polr3a	100	88.489	ENSSHAG00000007588	POLR3A	94	88.489	Sarcophilus_harrisii
ENSOMEG00000012865	polr3a	100	92.662	ENSSFOG00015014357	polr3a	100	92.662	Scleropages_formosus
ENSOMEG00000012865	polr3a	100	94.676	ENSSMAG00000001780	polr3a	100	94.676	Scophthalmus_maximus
ENSOMEG00000012865	polr3a	100	95.468	ENSSDUG00000019840	polr3a	100	95.468	Seriola_dumerili
ENSOMEG00000012865	polr3a	100	95.468	ENSSLDG00000023908	polr3a	100	95.468	Seriola_lalandi_dorsalis
ENSOMEG00000012865	polr3a	69	88.925	ENSSARG00000009916	POLR3A	88	88.925	Sorex_araneus
ENSOMEG00000012865	polr3a	100	87.338	ENSSPUG00000013209	POLR3A	100	87.338	Sphenodon_punctatus
ENSOMEG00000012865	polr3a	100	95.540	ENSSPAG00000017712	polr3a	100	95.540	Stegastes_partitus
ENSOMEG00000012865	polr3a	100	88.705	ENSSSCG00000010327	POLR3A	100	88.705	Sus_scrofa
ENSOMEG00000012865	polr3a	100	89.568	ENSTGUG00000006423	-	100	89.568	Taeniopygia_guttata
ENSOMEG00000012865	polr3a	100	93.813	ENSTRUG00000013488	polr3a	100	93.813	Takifugu_rubripes
ENSOMEG00000012865	polr3a	100	94.540	ENSTNIG00000013151	polr3a	100	94.540	Tetraodon_nigroviridis
ENSOMEG00000012865	polr3a	71	89.362	ENSTBEG00000015288	POLR3A	75	89.362	Tupaia_belangeri
ENSOMEG00000012865	polr3a	100	82.734	ENSTTRG00000007817	POLR3A	100	82.734	Tursiops_truncatus
ENSOMEG00000012865	polr3a	100	86.547	ENSUAMG00000011283	POLR3A	100	86.547	Ursus_americanus
ENSOMEG00000012865	polr3a	100	88.849	ENSUMAG00000013913	POLR3A	100	88.849	Ursus_maritimus
ENSOMEG00000012865	polr3a	99	80.873	ENSVPAG00000003285	POLR3A	100	80.873	Vicugna_pacos
ENSOMEG00000012865	polr3a	100	88.849	ENSVVUG00000025523	POLR3A	100	88.849	Vulpes_vulpes
ENSOMEG00000012865	polr3a	86	88.972	ENSXETG00000018101	polr3a	100	88.972	Xenopus_tropicalis
ENSOMEG00000012865	polr3a	100	95.036	ENSXMAG00000015213	polr3a	100	95.036	Xiphophorus_maculatus