EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000013128 (Gene tree)
Gene ID: 112154776
Gene Symbol: zgc:101559
Alias: -
Full Name: ras-related protein Rab-33B-like
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 2657 bases
Position: chrNVQA01000019.1:21292297-21294953
Accession: 112154776
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000029460	MMR_HSR1	PF01926.23	4.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000018979	-	1362	XM_024285936	ENSOMEP00000029460	233 (aa)	XP_024141704	UPI000CF7C42F

Gene Model

Click here to download ENSOMEG00000013128's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000013128's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000013128	zgc:101559	70	38.462	ENSOMEG00000017263	-	79	38.462
ENSOMEG00000013128	zgc:101559	72	40.120	ENSOMEG00000009290	-	75	40.120
ENSOMEG00000013128	zgc:101559	67	41.667	ENSOMEG00000016752	rab2a	73	41.667
ENSOMEG00000013128	zgc:101559	84	35.294	ENSOMEG00000010510	rab25a	94	35.294
ENSOMEG00000013128	zgc:101559	70	38.462	ENSOMEG00000010156	-	79	38.462
ENSOMEG00000013128	zgc:101559	99	54.077	ENSOMEG00000017306	rab33a	85	54.077
ENSOMEG00000013128	zgc:101559	63	41.497	ENSOMEG00000007546	rab18b	71	41.497
ENSOMEG00000013128	zgc:101559	63	32.667	ENSOMEG00000017890	dnajc27	55	32.667
ENSOMEG00000013128	zgc:101559	72	39.521	ENSOMEG00000003623	rab14	75	39.521
ENSOMEG00000013128	zgc:101559	67	44.654	ENSOMEG00000006333	RAB39B	74	44.654
ENSOMEG00000013128	zgc:101559	74	34.682	ENSOMEG00000011584	pth2r	71	34.682
ENSOMEG00000013128	zgc:101559	80	41.176	ENSOMEG00000015474	si:dkey-16l2.16	89	40.306
ENSOMEG00000013128	zgc:101559	54	43.651	ENSOMEG00000010334	rab34b	51	43.651
ENSOMEG00000013128	zgc:101559	68	32.911	ENSOMEG00000016685	zgc:55558	88	33.529
ENSOMEG00000013128	zgc:101559	70	36.364	ENSOMEG00000001706	rab23	71	39.189
ENSOMEG00000013128	zgc:101559	83	36.410	ENSOMEG00000018494	-	78	36.410
ENSOMEG00000013128	zgc:101559	69	37.576	ENSOMEG00000008327	rab9b	73	37.576
ENSOMEG00000013128	zgc:101559	80	37.634	ENSOMEG00000023625	rab6bb	86	39.053
ENSOMEG00000013128	zgc:101559	63	35.811	ENSOMEG00000013685	rheb	79	35.811
ENSOMEG00000013128	zgc:101559	73	39.181	ENSOMEG00000023078	rab5c	76	39.181
ENSOMEG00000013128	zgc:101559	87	40.097	ENSOMEG00000008191	rab12	83	40.097
ENSOMEG00000013128	zgc:101559	74	41.040	ENSOMEG00000017806	-	78	41.040
ENSOMEG00000013128	zgc:101559	66	44.516	ENSOMEG00000017881	-	72	44.516
ENSOMEG00000013128	zgc:101559	63	42.177	ENSOMEG00000020605	rab18a	93	37.056
ENSOMEG00000013128	zgc:101559	74	46.821	ENSOMEG00000006036	rab1ab	83	46.821
ENSOMEG00000013128	zgc:101559	63	44.898	ENSOMEG00000019462	RAB15	70	44.898
ENSOMEG00000013128	zgc:101559	74	40.462	ENSOMEG00000002562	-	78	40.462
ENSOMEG00000013128	zgc:101559	78	45.304	ENSOMEG00000009074	-	84	45.304
ENSOMEG00000013128	zgc:101559	82	37.113	ENSOMEG00000020350	rab25b	94	36.649
ENSOMEG00000013128	zgc:101559	73	40.936	ENSOMEG00000010692	rab5aa	77	40.936
ENSOMEG00000013128	zgc:101559	84	39.394	ENSOMEG00000022002	rab15	91	39.394
ENSOMEG00000013128	zgc:101559	86	48.649	ENSOMEG00000021726	-	93	48.430
ENSOMEG00000013128	zgc:101559	63	41.722	ENSOMEG00000017958	si:dkey-34d22.5	67	41.722
ENSOMEG00000013128	zgc:101559	64	38.312	ENSOMEG00000000336	RAB29	75	38.312
ENSOMEG00000013128	zgc:101559	66	42.208	ENSOMEG00000020418	rab42a	70	42.208
ENSOMEG00000013128	zgc:101559	65	37.821	ENSOMEG00000009701	RAB9A	77	37.821
ENSOMEG00000013128	zgc:101559	76	45.506	ENSOMEG00000020594	zgc:171927	80	45.506
ENSOMEG00000013128	zgc:101559	51	36.975	ENSOMEG00000011161	RAP2B	87	37.594
ENSOMEG00000013128	zgc:101559	70	35.185	ENSOMEG00000018719	hrasb	89	35.632
ENSOMEG00000013128	zgc:101559	50	35.897	ENSOMEG00000008576	rabl2	53	35.897
ENSOMEG00000013128	zgc:101559	72	34.132	ENSOMEG00000011273	kras	90	34.637
ENSOMEG00000013128	zgc:101559	74	38.728	ENSOMEG00000020271	rab11al	79	38.728
ENSOMEG00000013128	zgc:101559	78	38.462	ENSOMEG00000002581	rab11ba	83	38.462
ENSOMEG00000013128	zgc:101559	78	39.560	ENSOMEG00000017467	rab11a	84	39.560
ENSOMEG00000013128	zgc:101559	69	41.358	ENSOMEG00000004379	-	76	41.358
ENSOMEG00000013128	zgc:101559	63	34.459	ENSOMEG00000009463	rhebl1	79	34.459
ENSOMEG00000013128	zgc:101559	71	34.463	ENSOMEG00000019923	rasl11a	67	34.463
ENSOMEG00000013128	zgc:101559	66	39.744	ENSOMEG00000023716	opn1sw2	76	39.490
ENSOMEG00000013128	zgc:101559	67	34.177	ENSOMEG00000000162	rab9a	78	34.177
ENSOMEG00000013128	zgc:101559	64	42.953	ENSOMEG00000017258	RAB41	70	42.953
ENSOMEG00000013128	zgc:101559	64	46.622	ENSOMEG00000008210	rab13	73	46.622
ENSOMEG00000013128	zgc:101559	72	50.299	ENSOMEG00000001613	rab30	80	50.299
ENSOMEG00000013128	zgc:101559	85	60.386	ENSOMEG00000019819	rab33ba	87	60.386
ENSOMEG00000013128	zgc:101559	69	38.889	ENSOMEG00000014206	rab6ba	76	38.889

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000013128	zgc:101559	100	83.761	ENSAPOG00000007503	zgc:101559	100	83.761	Acanthochromis_polyacanthus
ENSOMEG00000013128	zgc:101559	90	87.143	ENSACIG00000021459	zgc:101559	92	87.143	Amphilophus_citrinellus
ENSOMEG00000013128	zgc:101559	100	84.188	ENSAOCG00000024675	zgc:101559	100	84.188	Amphiprion_ocellaris
ENSOMEG00000013128	zgc:101559	100	84.188	ENSAPEG00000005176	zgc:101559	100	84.188	Amphiprion_percula
ENSOMEG00000013128	zgc:101559	100	81.624	ENSATEG00000007761	zgc:101559	100	81.624	Anabas_testudineus
ENSOMEG00000013128	zgc:101559	97	85.965	ENSACLG00000027006	zgc:101559	97	85.965	Astatotilapia_calliptera
ENSOMEG00000013128	zgc:101559	100	74.359	ENSAMXG00000040460	zgc:101559	94	74.359	Astyanax_mexicanus
ENSOMEG00000013128	zgc:101559	100	77.778	ENSCSEG00000006243	zgc:101559	100	77.778	Cynoglossus_semilaevis
ENSOMEG00000013128	zgc:101559	100	85.470	ENSCVAG00000019227	zgc:101559	100	85.470	Cyprinodon_variegatus
ENSOMEG00000013128	zgc:101559	100	73.077	ENSDARG00000003257	zgc:101559	100	73.077	Danio_rerio
ENSOMEG00000013128	zgc:101559	100	82.906	ENSFHEG00000011483	zgc:101559	100	82.906	Fundulus_heteroclitus
ENSOMEG00000013128	zgc:101559	91	78.774	ENSGMOG00000011665	zgc:101559	99	78.774	Gadus_morhua
ENSOMEG00000013128	zgc:101559	100	84.188	ENSGAFG00000021202	zgc:101559	100	84.188	Gambusia_affinis
ENSOMEG00000013128	zgc:101559	91	80.660	ENSGACG00000001725	zgc:101559	91	80.660	Gasterosteus_aculeatus
ENSOMEG00000013128	zgc:101559	100	85.043	ENSHBUG00000007827	zgc:101559	100	85.043	Haplochromis_burtoni
ENSOMEG00000013128	zgc:101559	100	75.847	ENSHCOG00000009133	zgc:101559	100	77.311	Hippocampus_comes
ENSOMEG00000013128	zgc:101559	100	68.240	ENSIPUG00000022394	zgc:101559	100	68.240	Ictalurus_punctatus
ENSOMEG00000013128	zgc:101559	100	79.149	ENSKMAG00000002862	zgc:101559	100	79.149	Kryptolebias_marmoratus
ENSOMEG00000013128	zgc:101559	100	85.043	ENSLBEG00000025798	zgc:101559	100	85.043	Labrus_bergylta
ENSOMEG00000013128	zgc:101559	88	65.854	ENSLACG00000011557	zgc:101559	89	65.854	Latimeria_chalumnae
ENSOMEG00000013128	zgc:101559	100	68.670	ENSLOCG00000005904	zgc:101559	99	68.670	Lepisosteus_oculatus
ENSOMEG00000013128	zgc:101559	100	83.761	ENSMAMG00000017431	zgc:101559	100	83.761	Mastacembelus_armatus
ENSOMEG00000013128	zgc:101559	100	85.043	ENSMZEG00005021778	zgc:101559	100	85.043	Maylandia_zebra
ENSOMEG00000013128	zgc:101559	100	78.632	ENSMMOG00000019779	zgc:101559	100	78.632	Mola_mola
ENSOMEG00000013128	zgc:101559	100	81.624	ENSMALG00000003712	zgc:101559	100	81.624	Monopterus_albus
ENSOMEG00000013128	zgc:101559	100	84.615	ENSNBRG00000002684	zgc:101559	100	84.615	Neolamprologus_brichardi
ENSOMEG00000013128	zgc:101559	100	85.043	ENSONIG00000006715	-	100	85.043	Oreochromis_niloticus
ENSOMEG00000013128	zgc:101559	100	93.991	ENSORLG00000030642	zgc:101559	100	93.991	Oryzias_latipes
ENSOMEG00000013128	zgc:101559	100	93.133	ENSORLG00020012685	zgc:101559	100	93.133	Oryzias_latipes_hni
ENSOMEG00000013128	zgc:101559	100	93.991	ENSORLG00015016047	zgc:101559	100	93.991	Oryzias_latipes_hsok
ENSOMEG00000013128	zgc:101559	85	76.000	ENSPKIG00000013397	zgc:101559	84	76.000	Paramormyrops_kingsleyae
ENSOMEG00000013128	zgc:101559	100	85.043	ENSPFOG00000009101	-	100	85.043	Poecilia_formosa
ENSOMEG00000013128	zgc:101559	100	85.043	ENSPLAG00000020627	zgc:101559	100	85.043	Poecilia_latipinna
ENSOMEG00000013128	zgc:101559	100	85.043	ENSPMEG00000010152	zgc:101559	100	85.043	Poecilia_mexicana
ENSOMEG00000013128	zgc:101559	100	84.615	ENSPREG00000007017	zgc:101559	100	84.615	Poecilia_reticulata
ENSOMEG00000013128	zgc:101559	100	85.043	ENSPNYG00000012922	zgc:101559	100	85.043	Pundamilia_nyererei
ENSOMEG00000013128	zgc:101559	100	73.391	ENSPNAG00000017856	zgc:101559	100	73.391	Pygocentrus_nattereri
ENSOMEG00000013128	zgc:101559	97	70.175	ENSSFOG00015006175	zgc:101559	97	70.175	Scleropages_formosus
ENSOMEG00000013128	zgc:101559	99	81.466	ENSSMAG00000002229	zgc:101559	98	81.466	Scophthalmus_maximus
ENSOMEG00000013128	zgc:101559	100	86.752	ENSSDUG00000008151	zgc:101559	100	86.752	Seriola_dumerili
ENSOMEG00000013128	zgc:101559	100	86.325	ENSSLDG00000019214	zgc:101559	100	86.325	Seriola_lalandi_dorsalis
ENSOMEG00000013128	zgc:101559	100	85.043	ENSSPAG00000006404	zgc:101559	100	85.043	Stegastes_partitus
ENSOMEG00000013128	zgc:101559	100	80.769	ENSTRUG00000009903	zgc:101559	100	80.769	Takifugu_rubripes
ENSOMEG00000013128	zgc:101559	93	80.734	ENSTNIG00000015000	zgc:101559	100	75.847	Tetraodon_nigroviridis
ENSOMEG00000013128	zgc:101559	100	84.615	ENSXCOG00000018683	zgc:101559	100	84.615	Xiphophorus_couchianus
ENSOMEG00000013128	zgc:101559	100	85.470	ENSXMAG00000011171	zgc:101559	100	85.470	Xiphophorus_maculatus