EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000013200 (Gene tree)
Gene ID: 112147841
Gene Symbol: -
Alias: -
Full Name: gametocyte-specific factor 1-like
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 1691 bases
Position: chrNVQA01000001.1:18267797-18269487
Accession: 112147841
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000011863	zf-U11-48K	PF05253.12	3.2e-18	1	2
ENSOMEP00000011863	zf-U11-48K	PF05253.12	3.2e-18	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000019045	-	1214	XM_024274482	ENSOMEP00000011863	150 (aa)	XP_024130250	UPI000CF7F1C2

Gene Model

Click here to download ENSOMEG00000013200's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000013200's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000013200	-	92	86.232	ENSOMEG00000021739	-	81	86.232
ENSOMEG00000013200	-	92	50.704	ENSOMEG00000021773	-	80	50.704

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000013200	-	68	60.784	ENSAPOG00000000311	-	63	60.784	Acanthochromis_polyacanthus
ENSOMEG00000013200	-	88	51.799	ENSAPOG00000021951	-	78	51.799	Acanthochromis_polyacanthus
ENSOMEG00000013200	-	92	54.610	ENSACIG00000013400	zgc:56699	86	50.806	Amphilophus_citrinellus
ENSOMEG00000013200	-	88	53.623	ENSAOCG00000013650	-	78	53.623	Amphiprion_ocellaris
ENSOMEG00000013200	-	71	55.752	ENSAPEG00000006689	zgc:56699	76	55.752	Amphiprion_percula
ENSOMEG00000013200	-	88	55.474	ENSATEG00000024058	zgc:56699	77	55.474	Anabas_testudineus
ENSOMEG00000013200	-	97	52.941	ENSACLG00000023562	zgc:56699	78	52.941	Astatotilapia_calliptera
ENSOMEG00000013200	-	93	55.333	ENSAMXG00000038346	zgc:56699	81	55.333	Astyanax_mexicanus
ENSOMEG00000013200	-	94	50.685	ENSCSEG00000021520	zgc:56699	70	50.685	Cynoglossus_semilaevis
ENSOMEG00000013200	-	73	53.636	ENSCVAG00000009972	zgc:56699	60	53.636	Cyprinodon_variegatus
ENSOMEG00000013200	-	91	51.020	ENSDARG00000000887	zgc:56699	81	51.020	Danio_rerio
ENSOMEG00000013200	-	77	49.167	ENSDARG00000099586	CR382383.2	67	49.167	Danio_rerio
ENSOMEG00000013200	-	88	38.028	ENSEBUG00000005577	-	75	38.028	Eptatretus_burgeri
ENSOMEG00000013200	-	76	55.556	ENSELUG00000003242	gtsf1	64	55.556	Esox_lucius
ENSOMEG00000013200	-	88	54.478	ENSFHEG00000006036	zgc:56699	72	54.128	Fundulus_heteroclitus
ENSOMEG00000013200	-	54	55.422	ENSGMOG00000007295	zgc:56699	69	55.422	Gadus_morhua
ENSOMEG00000013200	-	75	45.000	ENSGALG00000035365	-	68	45.000	Gallus_gallus
ENSOMEG00000013200	-	88	56.522	ENSGAFG00000020743	zgc:56699	77	56.522	Gambusia_affinis
ENSOMEG00000013200	-	93	54.730	ENSHBUG00000005327	zgc:56699	82	54.730	Haplochromis_burtoni
ENSOMEG00000013200	-	95	44.295	ENSHCOG00000010296	-	86	44.295	Hippocampus_comes
ENSOMEG00000013200	-	88	49.640	ENSIPUG00000011498	zgc:56699	75	49.640	Ictalurus_punctatus
ENSOMEG00000013200	-	92	54.930	ENSLBEG00000015981	zgc:56699	83	52.991	Labrus_bergylta
ENSOMEG00000013200	-	85	52.308	ENSMAMG00000001846	zgc:56699	73	52.308	Mastacembelus_armatus
ENSOMEG00000013200	-	97	52.941	ENSMZEG00005026479	zgc:56699	78	52.941	Maylandia_zebra
ENSOMEG00000013200	-	67	56.000	ENSMMOG00000017331	zgc:56699	55	56.000	Mola_mola
ENSOMEG00000013200	-	97	52.941	ENSNBRG00000006336	zgc:56699	85	52.941	Neolamprologus_brichardi
ENSOMEG00000013200	-	93	56.463	ENSONIG00000016720	zgc:56699	75	56.463	Oreochromis_niloticus
ENSOMEG00000013200	-	71	36.975	ENSOANG00000030381	-	73	36.975	Ornithorhynchus_anatinus
ENSOMEG00000013200	-	92	68.085	ENSORLG00000015258	-	82	68.085	Oryzias_latipes
ENSOMEG00000013200	-	92	47.552	ENSORLG00000025877	-	85	47.552	Oryzias_latipes
ENSOMEG00000013200	-	92	47.552	ENSORLG00020011013	-	85	47.552	Oryzias_latipes_hni
ENSOMEG00000013200	-	92	65.957	ENSORLG00020010990	-	82	65.957	Oryzias_latipes_hni
ENSOMEG00000013200	-	92	68.085	ENSORLG00015004961	zgc:56699	82	68.085	Oryzias_latipes_hsok
ENSOMEG00000013200	-	92	47.945	ENSPKIG00000017039	zgc:56699	82	47.945	Paramormyrops_kingsleyae
ENSOMEG00000013200	-	81	48.837	ENSPMGG00000023241	zgc:56699	77	48.837	Periophthalmus_magnuspinnatus
ENSOMEG00000013200	-	68	43.636	ENSPMAG00000009653	-	84	43.636	Petromyzon_marinus
ENSOMEG00000013200	-	88	55.072	ENSPFOG00000009204	zgc:56699	77	55.072	Poecilia_formosa
ENSOMEG00000013200	-	81	55.118	ENSPLAG00000009088	zgc:56699	75	55.752	Poecilia_latipinna
ENSOMEG00000013200	-	88	55.072	ENSPMEG00000001443	zgc:56699	77	55.072	Poecilia_mexicana
ENSOMEG00000013200	-	88	56.522	ENSPREG00000000745	zgc:56699	77	56.637	Poecilia_reticulata
ENSOMEG00000013200	-	97	53.595	ENSPNYG00000002811	zgc:56699	85	53.595	Pundamilia_nyererei
ENSOMEG00000013200	-	88	55.224	ENSPNAG00000005165	zgc:56699	73	55.224	Pygocentrus_nattereri
ENSOMEG00000013200	-	81	50.820	ENSSFOG00015021600	zgc:56699	68	50.820	Scleropages_formosus
ENSOMEG00000013200	-	91	55.714	ENSSMAG00000020886	zgc:56699	79	55.714	Scophthalmus_maximus
ENSOMEG00000013200	-	92	53.793	ENSSDUG00000002033	zgc:56699	90	46.099	Seriola_dumerili
ENSOMEG00000013200	-	92	53.103	ENSSLDG00000014113	zgc:56699	90	45.000	Seriola_lalandi_dorsalis
ENSOMEG00000013200	-	88	55.882	ENSSPAG00000019854	-	80	55.882	Stegastes_partitus
ENSOMEG00000013200	-	88	50.345	ENSSPAG00000010005	-	90	50.345	Stegastes_partitus
ENSOMEG00000013200	-	91	54.610	ENSTRUG00000015537	zgc:56699	80	54.610	Takifugu_rubripes
ENSOMEG00000013200	-	89	53.285	ENSTNIG00000012515	zgc:56699	93	53.285	Tetraodon_nigroviridis
ENSOMEG00000013200	-	81	56.693	ENSXCOG00000014400	zgc:56699	69	56.693	Xiphophorus_couchianus
ENSOMEG00000013200	-	88	56.522	ENSXMAG00000011692	zgc:56699	77	56.522	Xiphophorus_maculatus