EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000013531 (Gene tree)
Gene ID: 112138864
Gene Symbol: a1cf
Alias: -
Full Name: apobec1 complementation factor
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 52023 bases
Position: chrNVQA01001843.1:212532-264554
Accession: ZDB-GENE-060824-3
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000012149	DND1_DSRM	PF14709.7	1.3e-24	1	1
ENSOMEP00000012149	RRM_1	PF00076.22	1.1e-39	1	3
ENSOMEP00000012149	RRM_1	PF00076.22	1.1e-39	2	3
ENSOMEP00000012149	RRM_1	PF00076.22	1.1e-39	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000032597	-	1812	-	ENSOMEP00000012149	603 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000013531's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000013531's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000013531	a1cf	64	64.336	ENSOMEG00000022580	rbm46	89	61.935
ENSOMEG00000013531	a1cf	52	52.978	ENSOMEG00000007244	hnrnpr	68	45.221
ENSOMEG00000013531	a1cf	87	52.852	ENSOMEG00000010730	rbm47	82	50.995

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000013531	a1cf	100	75.124	ENSG00000148584	A1CF	100	87.624	Homo_sapiens
ENSOMEG00000013531	a1cf	100	83.085	ENSAPOG00000008259	a1cf	100	83.416	Acanthochromis_polyacanthus
ENSOMEG00000013531	a1cf	100	73.977	ENSAMEG00000000523	A1CF	100	74.632	Ailuropoda_melanoleuca
ENSOMEG00000013531	a1cf	100	85.338	ENSACIG00000008632	a1cf	100	86.985	Amphilophus_citrinellus
ENSOMEG00000013531	a1cf	100	84.437	ENSAOCG00000023744	a1cf	100	86.116	Amphiprion_ocellaris
ENSOMEG00000013531	a1cf	100	83.170	ENSAPEG00000009537	a1cf	100	84.829	Amphiprion_percula
ENSOMEG00000013531	a1cf	100	87.624	ENSATEG00000013720	a1cf	100	88.284	Anabas_testudineus
ENSOMEG00000013531	a1cf	100	75.614	ENSAPLG00000002964	A1CF	100	75.614	Anas_platyrhynchos
ENSOMEG00000013531	a1cf	100	75.290	ENSACAG00000015269	A1CF	100	75.290	Anolis_carolinensis
ENSOMEG00000013531	a1cf	100	75.954	ENSANAG00000019974	A1CF	100	76.119	Aotus_nancymaae
ENSOMEG00000013531	a1cf	100	83.361	ENSACLG00000017428	a1cf	100	84.679	Astatotilapia_calliptera
ENSOMEG00000013531	a1cf	100	74.309	ENSAMXG00000018180	a1cf	100	74.351	Astyanax_mexicanus
ENSOMEG00000013531	a1cf	100	76.285	ENSBTAG00000021195	A1CF	100	78.119	Bos_taurus
ENSOMEG00000013531	a1cf	100	74.795	ENSCJAG00000005045	A1CF	100	74.959	Callithrix_jacchus
ENSOMEG00000013531	a1cf	100	73.977	ENSCAFG00000015581	A1CF	100	74.632	Canis_familiaris
ENSOMEG00000013531	a1cf	100	73.977	ENSCAFG00020026421	A1CF	98	82.667	Canis_lupus_dingo
ENSOMEG00000013531	a1cf	100	75.614	ENSCHIG00000020411	A1CF	100	75.777	Capra_hircus
ENSOMEG00000013531	a1cf	94	75.571	ENSTSYG00000001755	A1CF	100	75.923	Carlito_syrichta
ENSOMEG00000013531	a1cf	100	72.595	ENSCAPG00000017386	A1CF	100	72.303	Cavia_aperea
ENSOMEG00000013531	a1cf	100	73.813	ENSCPOG00000009807	A1CF	100	74.141	Cavia_porcellus
ENSOMEG00000013531	a1cf	100	75.123	ENSCCAG00000018168	A1CF	100	75.123	Cebus_capucinus
ENSOMEG00000013531	a1cf	100	75.622	ENSCATG00000043715	A1CF	100	75.622	Cercocebus_atys
ENSOMEG00000013531	a1cf	100	74.141	ENSCLAG00000010424	A1CF	100	74.304	Chinchilla_lanigera
ENSOMEG00000013531	a1cf	100	74.795	ENSCSAG00000007032	A1CF	100	74.795	Chlorocebus_sabaeus
ENSOMEG00000013531	a1cf	98	72.987	ENSCHOG00000009089	A1CF	98	73.322	Choloepus_hoffmanni
ENSOMEG00000013531	a1cf	100	75.777	ENSCPBG00000026464	A1CF	100	75.777	Chrysemys_picta_bellii
ENSOMEG00000013531	a1cf	100	74.632	ENSCANG00000038032	A1CF	100	74.632	Colobus_angolensis_palliatus
ENSOMEG00000013531	a1cf	100	72.831	ENSCGRG00001017413	A1cf	100	72.995	Cricetulus_griseus_chok1gshd
ENSOMEG00000013531	a1cf	100	72.177	ENSCGRG00000017332	A1cf	100	72.668	Cricetulus_griseus_crigri
ENSOMEG00000013531	a1cf	100	82.843	ENSCSEG00000002361	a1cf	100	82.843	Cynoglossus_semilaevis
ENSOMEG00000013531	a1cf	100	87.294	ENSCVAG00000010520	a1cf	100	88.614	Cyprinodon_variegatus
ENSOMEG00000013531	a1cf	100	79.934	ENSDARG00000002968	a1cf	100	80.431	Danio_rerio
ENSOMEG00000013531	a1cf	100	74.795	ENSDNOG00000002829	A1CF	100	74.795	Dasypus_novemcinctus
ENSOMEG00000013531	a1cf	82	83.636	ENSETEG00000012527	A1CF	80	84.815	Echinops_telfairi
ENSOMEG00000013531	a1cf	100	74.673	ENSEASG00005012924	A1CF	100	74.837	Equus_asinus_asinus
ENSOMEG00000013531	a1cf	100	74.346	ENSECAG00000010424	A1CF	100	74.510	Equus_caballus
ENSOMEG00000013531	a1cf	78	68.076	ENSEEUG00000000013	A1CF	100	68.076	Erinaceus_europaeus
ENSOMEG00000013531	a1cf	100	79.051	ENSELUG00000003159	a1cf	100	79.051	Esox_lucius
ENSOMEG00000013531	a1cf	100	74.129	ENSFCAG00000011179	A1CF	100	75.290	Felis_catus
ENSOMEG00000013531	a1cf	100	77.114	ENSFALG00000013183	A1CF	100	77.114	Ficedula_albicollis
ENSOMEG00000013531	a1cf	100	75.456	ENSFDAG00000019371	A1CF	100	75.788	Fukomys_damarensis
ENSOMEG00000013531	a1cf	100	81.848	ENSFHEG00000019652	a1cf	96	89.844	Fundulus_heteroclitus
ENSOMEG00000013531	a1cf	100	75.862	ENSGMOG00000018943	a1cf	100	75.862	Gadus_morhua
ENSOMEG00000013531	a1cf	95	75.260	ENSGALG00000003765	A1CF	96	75.260	Gallus_gallus
ENSOMEG00000013531	a1cf	100	81.126	ENSGAFG00000014868	a1cf	100	81.126	Gambusia_affinis
ENSOMEG00000013531	a1cf	100	83.142	ENSGACG00000010241	a1cf	100	83.633	Gasterosteus_aculeatus
ENSOMEG00000013531	a1cf	96	74.744	ENSGAGG00000016508	A1CF	98	74.744	Gopherus_agassizii
ENSOMEG00000013531	a1cf	100	74.141	ENSGGOG00000009670	A1CF	100	74.795	Gorilla_gorilla
ENSOMEG00000013531	a1cf	100	86.326	ENSHBUG00000021959	a1cf	100	87.644	Haplochromis_burtoni
ENSOMEG00000013531	a1cf	100	74.468	ENSHGLG00000008955	A1CF	100	74.468	Heterocephalus_glaber_female
ENSOMEG00000013531	a1cf	100	73.813	ENSHGLG00100000518	A1CF	100	73.813	Heterocephalus_glaber_male
ENSOMEG00000013531	a1cf	100	72.698	ENSHCOG00000017669	a1cf	100	74.798	Hippocampus_comes
ENSOMEG00000013531	a1cf	88	82.070	ENSIPUG00000010367	a1cf	99	80.742	Ictalurus_punctatus
ENSOMEG00000013531	a1cf	100	85.691	ENSKMAG00000006568	a1cf	100	85.877	Kryptolebias_marmoratus
ENSOMEG00000013531	a1cf	99	85.016	ENSLBEG00000020994	a1cf	99	85.993	Labrus_bergylta
ENSOMEG00000013531	a1cf	100	78.441	ENSLACG00000008061	A1CF	100	78.441	Latimeria_chalumnae
ENSOMEG00000013531	a1cf	100	78.560	ENSLOCG00000006302	a1cf	100	78.560	Lepisosteus_oculatus
ENSOMEG00000013531	a1cf	100	73.322	ENSLAFG00000015462	A1CF	100	74.141	Loxodonta_africana
ENSOMEG00000013531	a1cf	100	75.622	ENSMFAG00000035948	A1CF	100	75.622	Macaca_fascicularis
ENSOMEG00000013531	a1cf	100	75.622	ENSMMUG00000007077	A1CF	100	75.622	Macaca_mulatta
ENSOMEG00000013531	a1cf	100	75.456	ENSMNEG00000031454	A1CF	100	75.456	Macaca_nemestrina
ENSOMEG00000013531	a1cf	100	74.632	ENSMLEG00000037223	A1CF	100	74.632	Mandrillus_leucophaeus
ENSOMEG00000013531	a1cf	100	84.437	ENSMAMG00000010402	a1cf	100	85.430	Mastacembelus_armatus
ENSOMEG00000013531	a1cf	100	83.987	ENSMZEG00005013245	a1cf	100	83.987	Maylandia_zebra
ENSOMEG00000013531	a1cf	100	75.163	ENSMGAG00000001507	A1CF	100	75.163	Meleagris_gallopavo
ENSOMEG00000013531	a1cf	100	72.340	ENSMAUG00000007422	A1cf	100	72.340	Mesocricetus_auratus
ENSOMEG00000013531	a1cf	100	74.545	ENSMICG00000003377	A1CF	100	75.537	Microcebus_murinus
ENSOMEG00000013531	a1cf	100	73.650	ENSMOCG00000021536	A1cf	100	73.650	Microtus_ochrogaster
ENSOMEG00000013531	a1cf	100	75.537	ENSMMOG00000009422	a1cf	100	76.364	Mola_mola
ENSOMEG00000013531	a1cf	89	78.652	ENSMODG00000016478	A1CF	99	78.119	Monodelphis_domestica
ENSOMEG00000013531	a1cf	100	78.441	ENSMALG00000012992	a1cf	100	78.441	Monopterus_albus
ENSOMEG00000013531	a1cf	100	73.466	MGP_CAROLIEiJ_G0022873	A1cf	100	73.466	Mus_caroli
ENSOMEG00000013531	a1cf	100	73.466	ENSMUSG00000052595	A1cf	99	81.667	Mus_musculus
ENSOMEG00000013531	a1cf	100	72.637	MGP_PahariEiJ_G0014366	A1cf	100	72.637	Mus_pahari
ENSOMEG00000013531	a1cf	100	73.632	MGP_SPRETEiJ_G0023792	A1cf	100	73.632	Mus_spretus
ENSOMEG00000013531	a1cf	100	68.249	ENSMPUG00000016971	A1CF	100	68.740	Mustela_putorius_furo
ENSOMEG00000013531	a1cf	100	74.141	ENSMLUG00000016071	A1CF	100	74.632	Myotis_lucifugus
ENSOMEG00000013531	a1cf	100	73.322	ENSNGAG00000015136	A1cf	100	73.322	Nannospalax_galili
ENSOMEG00000013531	a1cf	100	85.997	ENSNBRG00000001712	a1cf	100	87.315	Neolamprologus_brichardi
ENSOMEG00000013531	a1cf	100	74.959	ENSNLEG00000012028	A1CF	100	75.123	Nomascus_leucogenys
ENSOMEG00000013531	a1cf	94	75.747	ENSMEUG00000015909	A1CF	100	75.747	Notamacropus_eugenii
ENSOMEG00000013531	a1cf	88	68.030	ENSOPRG00000010667	A1CF	100	67.201	Ochotona_princeps
ENSOMEG00000013531	a1cf	100	86.985	ENSONIG00000019105	a1cf	100	87.479	Oreochromis_niloticus
ENSOMEG00000013531	a1cf	78	77.542	ENSOANG00000007360	A1CF	99	77.542	Ornithorhynchus_anatinus
ENSOMEG00000013531	a1cf	100	75.124	ENSOCUG00000011587	A1CF	100	75.124	Oryctolagus_cuniculus
ENSOMEG00000013531	a1cf	100	90.228	ENSORLG00000013342	a1cf	100	90.228	Oryzias_latipes
ENSOMEG00000013531	a1cf	100	92.834	ENSORLG00020000586	a1cf	100	93.648	Oryzias_latipes_hni
ENSOMEG00000013531	a1cf	100	92.997	ENSORLG00015018569	a1cf	100	93.811	Oryzias_latipes_hsok
ENSOMEG00000013531	a1cf	100	73.650	ENSOGAG00000012884	A1CF	100	74.959	Otolemur_garnettii
ENSOMEG00000013531	a1cf	100	75.123	ENSOARG00000013695	A1CF	100	75.286	Ovis_aries
ENSOMEG00000013531	a1cf	99	72.295	ENSPPAG00000028115	A1CF	99	77.909	Pan_paniscus
ENSOMEG00000013531	a1cf	100	73.159	ENSPPRG00000012180	A1CF	100	74.304	Panthera_pardus
ENSOMEG00000013531	a1cf	100	73.159	ENSPTIG00000021223	A1CF	100	74.304	Panthera_tigris_altaica
ENSOMEG00000013531	a1cf	100	75.290	ENSPTRG00000002508	A1CF	100	75.954	Pan_troglodytes
ENSOMEG00000013531	a1cf	100	75.622	ENSPANG00000021988	A1CF	100	75.622	Papio_anubis
ENSOMEG00000013531	a1cf	100	78.396	ENSPKIG00000025176	a1cf	100	78.887	Paramormyrops_kingsleyae
ENSOMEG00000013531	a1cf	100	76.617	ENSPSIG00000010318	A1CF	100	76.617	Pelodiscus_sinensis
ENSOMEG00000013531	a1cf	98	69.580	ENSPMGG00000013359	a1cf	99	70.924	Periophthalmus_magnuspinnatus
ENSOMEG00000013531	a1cf	100	73.159	ENSPEMG00000015021	A1cf	100	73.159	Peromyscus_maniculatus_bairdii
ENSOMEG00000013531	a1cf	100	75.456	ENSPCIG00000002175	A1CF	100	76.285	Phascolarctos_cinereus
ENSOMEG00000013531	a1cf	100	86.645	ENSPFOG00000006683	a1cf	100	86.971	Poecilia_formosa
ENSOMEG00000013531	a1cf	100	85.668	ENSPFOG00000007437	-	100	86.971	Poecilia_formosa
ENSOMEG00000013531	a1cf	100	86.634	ENSPLAG00000000026	a1cf	100	87.954	Poecilia_latipinna
ENSOMEG00000013531	a1cf	100	86.634	ENSPLAG00000001210	-	100	87.954	Poecilia_latipinna
ENSOMEG00000013531	a1cf	100	79.208	ENSPMEG00000000921	a1cf	100	79.538	Poecilia_mexicana
ENSOMEG00000013531	a1cf	100	78.176	ENSPMEG00000015529	-	100	78.502	Poecilia_mexicana
ENSOMEG00000013531	a1cf	100	85.342	ENSPREG00000016298	a1cf	100	86.645	Poecilia_reticulata
ENSOMEG00000013531	a1cf	100	76.119	ENSPPYG00000002819	A1CF	100	76.285	Pongo_abelii
ENSOMEG00000013531	a1cf	80	59.167	ENSPCAG00000006463	A1CF	79	59.167	Procavia_capensis
ENSOMEG00000013531	a1cf	100	73.650	ENSPCOG00000024172	A1CF	100	74.468	Propithecus_coquereli
ENSOMEG00000013531	a1cf	100	85.366	ENSPNYG00000017944	a1cf	100	86.667	Pundamilia_nyererei
ENSOMEG00000013531	a1cf	100	81.322	ENSPNAG00000007704	a1cf	100	81.488	Pygocentrus_nattereri
ENSOMEG00000013531	a1cf	100	73.964	ENSRNOG00000033195	A1cf	100	73.964	Rattus_norvegicus
ENSOMEG00000013531	a1cf	100	69.494	ENSRBIG00000042892	A1CF	100	73.745	Rhinopithecus_bieti
ENSOMEG00000013531	a1cf	100	74.632	ENSRROG00000041398	A1CF	99	75.747	Rhinopithecus_roxellana
ENSOMEG00000013531	a1cf	100	75.123	ENSSBOG00000021930	A1CF	100	75.483	Saimiri_boliviensis_boliviensis
ENSOMEG00000013531	a1cf	100	76.119	ENSSHAG00000005096	A1CF	100	76.119	Sarcophilus_harrisii
ENSOMEG00000013531	a1cf	100	81.488	ENSSFOG00015011774	a1cf	100	81.683	Scleropages_formosus
ENSOMEG00000013531	a1cf	100	84.740	ENSSMAG00000013271	a1cf	100	85.227	Scophthalmus_maximus
ENSOMEG00000013531	a1cf	100	85.270	ENSSDUG00000013930	a1cf	100	85.270	Seriola_dumerili
ENSOMEG00000013531	a1cf	100	79.436	ENSSLDG00000004290	a1cf	100	79.436	Seriola_lalandi_dorsalis
ENSOMEG00000013531	a1cf	95	67.832	ENSSARG00000005940	A1CF	95	68.182	Sorex_araneus
ENSOMEG00000013531	a1cf	95	73.675	ENSSPUG00000006797	A1CF	95	73.675	Sphenodon_punctatus
ENSOMEG00000013531	a1cf	100	75.777	ENSSSCG00000010431	A1CF	100	75.941	Sus_scrofa
ENSOMEG00000013531	a1cf	100	76.307	ENSTGUG00000005090	A1CF	100	76.307	Taeniopygia_guttata
ENSOMEG00000013531	a1cf	100	82.927	ENSTRUG00000001982	a1cf	100	83.415	Takifugu_rubripes
ENSOMEG00000013531	a1cf	100	82.630	ENSTNIG00000003580	a1cf	100	82.630	Tetraodon_nigroviridis
ENSOMEG00000013531	a1cf	98	70.678	ENSTTRG00000013190	A1CF	96	70.847	Tursiops_truncatus
ENSOMEG00000013531	a1cf	100	75.290	ENSUAMG00000020065	A1CF	100	75.622	Ursus_americanus
ENSOMEG00000013531	a1cf	100	73.977	ENSUMAG00000011162	A1CF	100	74.468	Ursus_maritimus
ENSOMEG00000013531	a1cf	87	73.245	ENSVPAG00000006130	A1CF	86	73.245	Vicugna_pacos
ENSOMEG00000013531	a1cf	100	75.124	ENSVVUG00000002504	A1CF	99	76.799	Vulpes_vulpes
ENSOMEG00000013531	a1cf	100	70.213	ENSXETG00000006611	a1cf	100	70.213	Xenopus_tropicalis
ENSOMEG00000013531	a1cf	100	88.576	ENSXCOG00000003302	a1cf	100	88.576	Xiphophorus_couchianus
ENSOMEG00000013531	a1cf	100	87.418	ENSXMAG00000016703	a1cf	100	87.418	Xiphophorus_maculatus