EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000013691 (Gene tree)
Gene ID: -
Gene Symbol: chd3
Alias: -
Full Name: chromodomain helicase DNA binding protein 3
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 32854 bases
Position: chrNVQA01000020.1:8989947-9022800
Accession: ZDB-GENE-121031-4
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000012281	ResIII	PF04851.15	2.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000019597	-	4962	-	ENSOMEP00000012281	1653 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000013691's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000013691's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000013691	chd3	99	67.700	ENSOMEG00000014929	-	85	77.320
ENSOMEG00000013691	chd3	92	82.530	ENSOMEG00000016394	chd4a	85	83.537
ENSOMEG00000013691	chd3	99	67.765	ENSOMEG00000013408	-	86	67.327

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000013691	chd3	99	78.308	ENSG00000170004	CHD3	91	68.724	Homo_sapiens
ENSOMEG00000013691	chd3	99	88.189	ENSAPOG00000005614	chd3	95	92.134	Acanthochromis_polyacanthus
ENSOMEG00000013691	chd3	72	78.854	ENSAMEG00000003025	-	68	87.351	Ailuropoda_melanoleuca
ENSOMEG00000013691	chd3	99	89.811	ENSACIG00000019671	chd3	99	94.294	Amphilophus_citrinellus
ENSOMEG00000013691	chd3	99	90.223	ENSAOCG00000023784	chd3	99	90.103	Amphiprion_ocellaris
ENSOMEG00000013691	chd3	99	87.493	ENSAPEG00000006341	chd3	79	93.853	Amphiprion_percula
ENSOMEG00000013691	chd3	99	87.694	ENSATEG00000000848	chd3	99	87.256	Anabas_testudineus
ENSOMEG00000013691	chd3	99	78.195	ENSACAG00000004276	CHD3	67	81.524	Anolis_carolinensis
ENSOMEG00000013691	chd3	99	76.505	ENSANAG00000034323	CHD3	74	80.243	Aotus_nancymaae
ENSOMEG00000013691	chd3	99	88.760	ENSACLG00000009222	chd3	87	89.921	Astatotilapia_calliptera
ENSOMEG00000013691	chd3	99	77.355	ENSBTAG00000014377	CHD3	70	80.731	Bos_taurus
ENSOMEG00000013691	chd3	99	78.380	ENSCJAG00000014766	CHD3	85	77.579	Callithrix_jacchus
ENSOMEG00000013691	chd3	99	77.193	ENSCAFG00000016859	CHD3	70	80.500	Canis_familiaris
ENSOMEG00000013691	chd3	99	78.712	ENSCAFG00020007422	CHD3	90	77.652	Canis_lupus_dingo
ENSOMEG00000013691	chd3	99	77.161	ENSCHIG00000016737	CHD3	70	80.429	Capra_hircus
ENSOMEG00000013691	chd3	99	77.837	ENSTSYG00000035658	CHD3	75	77.817	Carlito_syrichta
ENSOMEG00000013691	chd3	99	74.342	ENSCAPG00000014864	CHD3	69	76.429	Cavia_aperea
ENSOMEG00000013691	chd3	99	78.308	ENSCCAG00000034792	CHD3	70	80.243	Cebus_capucinus
ENSOMEG00000013691	chd3	99	78.188	ENSCATG00000041717	CHD3	71	80.243	Cercocebus_atys
ENSOMEG00000013691	chd3	99	78.261	ENSCLAG00000010523	CHD3	72	80.214	Chinchilla_lanigera
ENSOMEG00000013691	chd3	99	77.153	ENSCSAG00000011122	CHD3	71	80.615	Chlorocebus_sabaeus
ENSOMEG00000013691	chd3	98	80.596	ENSCPBG00000011966	CHD3	88	81.818	Chrysemys_picta_bellii
ENSOMEG00000013691	chd3	99	78.181	ENSCANG00000037641	CHD3	76	76.912	Colobus_angolensis_palliatus
ENSOMEG00000013691	chd3	99	77.354	ENSCGRG00001011306	Chd3	72	79.800	Cricetulus_griseus_chok1gshd
ENSOMEG00000013691	chd3	89	74.933	ENSCGRG00000007878	Chd3	67	79.853	Cricetulus_griseus_crigri
ENSOMEG00000013691	chd3	99	86.006	ENSCSEG00000004489	chd3	88	90.706	Cynoglossus_semilaevis
ENSOMEG00000013691	chd3	99	86.995	ENSCVAG00000007293	chd3	87	91.476	Cyprinodon_variegatus
ENSOMEG00000013691	chd3	99	84.386	ENSDARG00000021405	chd3	93	80.012	Danio_rerio
ENSOMEG00000013691	chd3	87	77.347	ENSDNOG00000047846	CHD3	58	88.358	Dasypus_novemcinctus
ENSOMEG00000013691	chd3	99	78.222	ENSDORG00000010713	Chd3	86	77.267	Dipodomys_ordii
ENSOMEG00000013691	chd3	99	72.951	ENSETEG00000017733	CHD3	72	74.857	Echinops_telfairi
ENSOMEG00000013691	chd3	81	69.522	ENSEBUG00000008310	chd3	72	74.071	Eptatretus_burgeri
ENSOMEG00000013691	chd3	99	77.031	ENSEASG00005019360	CHD3	76	80.357	Equus_asinus_asinus
ENSOMEG00000013691	chd3	99	77.031	ENSECAG00000010051	CHD3	76	80.357	Equus_caballus
ENSOMEG00000013691	chd3	95	71.306	ENSEEUG00000015205	CHD3	77	78.125	Erinaceus_europaeus
ENSOMEG00000013691	chd3	94	85.149	ENSELUG00000019499	chd3	99	84.278	Esox_lucius
ENSOMEG00000013691	chd3	99	76.869	ENSFDAG00000008220	CHD3	70	80.129	Fukomys_damarensis
ENSOMEG00000013691	chd3	90	88.265	ENSGMOG00000013599	chd3	80	88.265	Gadus_morhua
ENSOMEG00000013691	chd3	64	88.626	ENSGAFG00000004055	chd3	90	90.840	Gambusia_affinis
ENSOMEG00000013691	chd3	99	81.839	ENSGACG00000019275	chd3	71	84.240	Gasterosteus_aculeatus
ENSOMEG00000013691	chd3	86	79.308	ENSGAGG00000013164	CHD3	97	79.141	Gopherus_agassizii
ENSOMEG00000013691	chd3	99	78.580	ENSGGOG00000013496	CHD3	76	76.842	Gorilla_gorilla
ENSOMEG00000013691	chd3	99	78.056	ENSHGLG00000012017	CHD3	70	80.071	Heterocephalus_glaber_female
ENSOMEG00000013691	chd3	83	73.629	ENSHGLG00100013902	CHD3	70	86.561	Heterocephalus_glaber_male
ENSOMEG00000013691	chd3	99	84.788	ENSHCOG00000010170	chd3	80	90.220	Hippocampus_comes
ENSOMEG00000013691	chd3	99	82.342	ENSIPUG00000003271	chd3	90	91.975	Ictalurus_punctatus
ENSOMEG00000013691	chd3	99	78.512	ENSSTOG00000025907	CHD3	72	80.429	Ictidomys_tridecemlineatus
ENSOMEG00000013691	chd3	99	78.333	ENSJJAG00000017633	Chd3	72	80.357	Jaculus_jaculus
ENSOMEG00000013691	chd3	99	87.226	ENSKMAG00000019292	chd3	88	87.158	Kryptolebias_marmoratus
ENSOMEG00000013691	chd3	99	82.854	ENSLBEG00000028485	chd3	83	92.000	Labrus_bergylta
ENSOMEG00000013691	chd3	99	73.590	ENSLACG00000008031	CHD3	87	73.349	Latimeria_chalumnae
ENSOMEG00000013691	chd3	99	81.127	ENSLOCG00000013965	chd3	78	85.827	Lepisosteus_oculatus
ENSOMEG00000013691	chd3	99	75.468	ENSLAFG00000000572	CHD3	70	84.801	Loxodonta_africana
ENSOMEG00000013691	chd3	99	78.188	ENSMFAG00000020113	CHD3	76	78.174	Macaca_fascicularis
ENSOMEG00000013691	chd3	99	75.557	ENSMMUG00000022221	CHD3	80	77.175	Macaca_mulatta
ENSOMEG00000013691	chd3	99	78.188	ENSMNEG00000001728	CHD3	76	79.601	Macaca_nemestrina
ENSOMEG00000013691	chd3	99	78.188	ENSMLEG00000032249	CHD3	71	80.243	Mandrillus_leucophaeus
ENSOMEG00000013691	chd3	99	89.782	ENSMAMG00000000564	chd3	99	89.782	Mastacembelus_armatus
ENSOMEG00000013691	chd3	99	77.553	ENSMAUG00000013873	Chd3	76	77.929	Mesocricetus_auratus
ENSOMEG00000013691	chd3	99	77.148	ENSMICG00000008741	CHD3	79	81.500	Microcebus_murinus
ENSOMEG00000013691	chd3	99	77.408	ENSMOCG00000004848	Chd3	72	79.872	Microtus_ochrogaster
ENSOMEG00000013691	chd3	99	86.880	ENSMMOG00000012699	chd3	91	84.749	Mola_mola
ENSOMEG00000013691	chd3	99	78.237	ENSMODG00000007509	CHD3	78	80.372	Monodelphis_domestica
ENSOMEG00000013691	chd3	99	78.030	MGP_CAROLIEiJ_G0016564	Chd3	74	79.943	Mus_caroli
ENSOMEG00000013691	chd3	99	77.950	ENSMUSG00000018474	Chd3	88	77.116	Mus_musculus
ENSOMEG00000013691	chd3	99	78.194	MGP_PahariEiJ_G0017695	Chd3	88	77.460	Mus_pahari
ENSOMEG00000013691	chd3	99	78.010	MGP_SPRETEiJ_G0017400	Chd3	88	77.116	Mus_spretus
ENSOMEG00000013691	chd3	93	77.806	ENSMPUG00000008861	CHD3	74	82.233	Mustela_putorius_furo
ENSOMEG00000013691	chd3	99	76.416	ENSMLUG00000014643	-	70	80.286	Myotis_lucifugus
ENSOMEG00000013691	chd3	99	77.089	ENSNGAG00000000773	Chd3	69	80.214	Nannospalax_galili
ENSOMEG00000013691	chd3	99	89.621	ENSNBRG00000000636	chd3	97	89.866	Neolamprologus_brichardi
ENSOMEG00000013691	chd3	99	76.404	ENSNLEG00000009770	CHD3	73	78.872	Nomascus_leucogenys
ENSOMEG00000013691	chd3	86	79.393	ENSMEUG00000005852	CHD3	73	85.246	Notamacropus_eugenii
ENSOMEG00000013691	chd3	99	76.982	ENSOPRG00000011069	CHD3	74	79.557	Ochotona_princeps
ENSOMEG00000013691	chd3	99	76.986	ENSODEG00000017785	CHD3	70	80.286	Octodon_degus
ENSOMEG00000013691	chd3	99	89.730	ENSONIG00000009292	chd3	73	94.218	Oreochromis_niloticus
ENSOMEG00000013691	chd3	97	74.583	ENSOCUG00000029299	CHD3	71	78.505	Oryctolagus_cuniculus
ENSOMEG00000013691	chd3	90	87.110	ENSORLG00000007107	chd3	88	86.264	Oryzias_latipes
ENSOMEG00000013691	chd3	61	92.247	ENSORLG00020008387	chd3	86	92.247	Oryzias_latipes_hni
ENSOMEG00000013691	chd3	99	77.175	ENSOGAG00000003216	CHD3	71	80.171	Otolemur_garnettii
ENSOMEG00000013691	chd3	98	76.631	ENSOARG00000017855	CHD3	69	80.304	Ovis_aries
ENSOMEG00000013691	chd3	99	76.484	ENSPPAG00000032886	CHD3	76	76.772	Pan_paniscus
ENSOMEG00000013691	chd3	99	78.866	ENSPPRG00000000626	CHD3	71	80.571	Panthera_pardus
ENSOMEG00000013691	chd3	99	78.308	ENSPTRG00000008714	CHD3	76	76.982	Pan_troglodytes
ENSOMEG00000013691	chd3	99	76.973	ENSPANG00000023938	CHD3	76	78.174	Papio_anubis
ENSOMEG00000013691	chd3	99	82.609	ENSPKIG00000006305	chd3	80	87.536	Paramormyrops_kingsleyae
ENSOMEG00000013691	chd3	64	81.852	ENSPSIG00000010177	CHD3	97	82.028	Pelodiscus_sinensis
ENSOMEG00000013691	chd3	99	78.123	ENSPCIG00000005442	CHD3	90	82.564	Phascolarctos_cinereus
ENSOMEG00000013691	chd3	99	86.429	ENSPFOG00000012464	chd3	75	92.214	Poecilia_formosa
ENSOMEG00000013691	chd3	99	83.244	ENSPLAG00000002887	chd3	81	96.203	Poecilia_latipinna
ENSOMEG00000013691	chd3	56	98.734	ENSPMEG00000016725	chd3	74	92.614	Poecilia_mexicana
ENSOMEG00000013691	chd3	99	89.240	ENSPREG00000011044	chd3	86	88.875	Poecilia_reticulata
ENSOMEG00000013691	chd3	99	74.342	ENSPPYG00000007940	CHD3	70	77.033	Pongo_abelii
ENSOMEG00000013691	chd3	94	80.146	ENSPCAG00000004350	CHD3	67	87.121	Procavia_capensis
ENSOMEG00000013691	chd3	99	78.380	ENSPCOG00000020952	CHD3	69	80.385	Propithecus_coquereli
ENSOMEG00000013691	chd3	83	75.705	ENSPVAG00000016344	CHD3	58	85.909	Pteropus_vampyrus
ENSOMEG00000013691	chd3	97	87.857	ENSPNAG00000020393	chd3	93	88.945	Pygocentrus_nattereri
ENSOMEG00000013691	chd3	99	76.973	ENSRNOG00000009722	Chd3	76	79.872	Rattus_norvegicus
ENSOMEG00000013691	chd3	99	75.749	ENSRBIG00000033562	CHD3	76	77.279	Rhinopithecus_bieti
ENSOMEG00000013691	chd3	99	78.188	ENSRROG00000029554	CHD3	76	78.316	Rhinopithecus_roxellana
ENSOMEG00000013691	chd3	99	78.367	ENSSBOG00000020719	CHD3	76	79.672	Saimiri_boliviensis_boliviensis
ENSOMEG00000013691	chd3	99	78.175	ENSSHAG00000014412	CHD3	73	80.000	Sarcophilus_harrisii
ENSOMEG00000013691	chd3	95	83.846	ENSSFOG00015023123	chd3	90	83.307	Scleropages_formosus
ENSOMEG00000013691	chd3	99	89.848	ENSSMAG00000006451	chd3	99	89.470	Scophthalmus_maximus
ENSOMEG00000013691	chd3	59	89.322	ENSSDUG00000005792	chd3	83	98.734	Seriola_dumerili
ENSOMEG00000013691	chd3	99	88.896	ENSSPAG00000013694	chd3	98	94.764	Stegastes_partitus
ENSOMEG00000013691	chd3	99	78.985	ENSSSCG00000021363	CHD3	87	77.970	Sus_scrofa
ENSOMEG00000013691	chd3	87	86.635	ENSTRUG00000014990	chd3	83	90.188	Takifugu_rubripes
ENSOMEG00000013691	chd3	99	87.768	ENSTNIG00000012998	chd3	86	87.112	Tetraodon_nigroviridis
ENSOMEG00000013691	chd3	72	86.124	ENSTBEG00000011454	-	68	88.119	Tupaia_belangeri
ENSOMEG00000013691	chd3	97	78.434	ENSTTRG00000010295	CHD3	67	84.017	Tursiops_truncatus
ENSOMEG00000013691	chd3	99	75.902	ENSUAMG00000005475	CHD3	87	82.000	Ursus_americanus
ENSOMEG00000013691	chd3	57	90.093	ENSVPAG00000010794	-	53	90.093	Vicugna_pacos
ENSOMEG00000013691	chd3	99	78.772	ENSVVUG00000028011	CHD3	83	77.639	Vulpes_vulpes
ENSOMEG00000013691	chd3	99	70.323	ENSXETG00000012991	chd3	68	71.963	Xenopus_tropicalis
ENSOMEG00000013691	chd3	58	91.648	ENSXCOG00000000809	chd3	84	92.605	Xiphophorus_couchianus
ENSOMEG00000013691	chd3	94	93.514	ENSXMAG00000016035	chd3	99	93.514	Xiphophorus_maculatus