EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000013771 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 8333 bases
Position: chrNVQA01000012.1:22709397-22717729
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000012399	zf-C2H2	PF00096.26	1.1e-32	1	6
ENSOMEP00000012399	zf-C2H2	PF00096.26	1.1e-32	2	6
ENSOMEP00000012399	zf-C2H2	PF00096.26	1.1e-32	3	6
ENSOMEP00000012399	zf-C2H2	PF00096.26	1.1e-32	4	6
ENSOMEP00000012399	zf-C2H2	PF00096.26	1.1e-32	5	6
ENSOMEP00000012399	zf-C2H2	PF00096.26	1.1e-32	6	6
ENSOMEP00000012399	zf-met	PF12874.7	7.9e-08	1	2
ENSOMEP00000012399	zf-met	PF12874.7	7.9e-08	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000032691	-	6300	-	ENSOMEP00000012399	803 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000013771's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000013771's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000013771	-	54	40.171	ENSOMEG00000013894	-	67	43.636
ENSOMEG00000013771	-	64	46.256	ENSOMEG00000021945	-	86	47.059
ENSOMEG00000013771	-	63	46.000	ENSOMEG00000016779	-	85	46.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000013771	-	99	71.412	ENSORLG00000027054	-	99	71.548	Oryzias_latipes
ENSOMEG00000013771	-	99	71.882	ENSORLG00020000181	-	99	72.024	Oryzias_latipes_hni
ENSOMEG00000013771	-	99	69.894	ENSORLG00015017539	-	95	94.444	Oryzias_latipes_hsok