EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOMEG00000013907 (Gene tree)
Gene ID: -
Gene Symbol: exosc1
Alias: -
Full Name: exosome component 1
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 5324 bases
Position: chrNVQA01000036.1:8806505-8811828
Accession: ZDB-GENE-080926-3
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000029940	ECR1_N	PF14382.6	1.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000019881	-	531	-	ENSOMEP00000029940	176 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000013907's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000013907's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000013907	exosc1	98	65.318	ENSG00000171311	EXOSC1	98	63.874	Homo_sapiens
ENSOMEG00000013907	exosc1	99	77.835	ENSAPOG00000007822	exosc1	100	77.835	Acanthochromis_polyacanthus
ENSOMEG00000013907	exosc1	98	63.874	ENSAMEG00000000129	EXOSC1	98	63.874	Ailuropoda_melanoleuca
ENSOMEG00000013907	exosc1	94	76.757	ENSACIG00000018956	exosc1	91	76.757	Amphilophus_citrinellus
ENSOMEG00000013907	exosc1	99	77.835	ENSAOCG00000010699	exosc1	100	77.835	Amphiprion_ocellaris
ENSOMEG00000013907	exosc1	91	74.699	ENSAPEG00000012690	exosc1	97	74.699	Amphiprion_percula
ENSOMEG00000013907	exosc1	100	80.226	ENSATEG00000018683	exosc1	100	80.226	Anabas_testudineus
ENSOMEG00000013907	exosc1	99	59.794	ENSACAG00000002101	EXOSC1	99	59.794	Anolis_carolinensis
ENSOMEG00000013907	exosc1	98	64.740	ENSANAG00000034669	EXOSC1	97	64.740	Aotus_nancymaae
ENSOMEG00000013907	exosc1	99	77.320	ENSACLG00000021243	exosc1	100	77.320	Astatotilapia_calliptera
ENSOMEG00000013907	exosc1	100	75.706	ENSAMXG00000011116	exosc1	100	75.706	Astyanax_mexicanus
ENSOMEG00000013907	exosc1	98	66.138	ENSBTAG00000012699	EXOSC1	98	66.138	Bos_taurus
ENSOMEG00000013907	exosc1	93	30.366	WBGene00012966	exos-1	92	30.366	Caenorhabditis_elegans
ENSOMEG00000013907	exosc1	98	64.740	ENSCJAG00000016586	EXOSC1	97	64.740	Callithrix_jacchus
ENSOMEG00000013907	exosc1	98	63.351	ENSCAFG00000009068	EXOSC1	92	63.351	Canis_familiaris
ENSOMEG00000013907	exosc1	98	63.351	ENSCAFG00020006002	EXOSC1	92	63.351	Canis_lupus_dingo
ENSOMEG00000013907	exosc1	98	63.874	ENSCHIG00000015253	EXOSC1	98	63.874	Capra_hircus
ENSOMEG00000013907	exosc1	98	63.584	ENSTSYG00000000760	EXOSC1	97	63.584	Carlito_syrichta
ENSOMEG00000013907	exosc1	98	64.740	ENSCPOG00000001173	EXOSC1	97	64.740	Cavia_porcellus
ENSOMEG00000013907	exosc1	98	38.333	ENSCCAG00000023986	EXOSC1	98	37.968	Cebus_capucinus
ENSOMEG00000013907	exosc1	98	65.318	ENSCATG00000034114	EXOSC1	97	65.318	Cercocebus_atys
ENSOMEG00000013907	exosc1	98	64.740	ENSCLAG00000002463	EXOSC1	97	64.740	Chinchilla_lanigera
ENSOMEG00000013907	exosc1	98	63.351	ENSCSAG00000005870	EXOSC1	98	63.351	Chlorocebus_sabaeus
ENSOMEG00000013907	exosc1	94	51.366	ENSCHOG00000006477	EXOSC1	98	51.366	Choloepus_hoffmanni
ENSOMEG00000013907	exosc1	98	40.415	ENSCING00000022734	-	92	40.415	Ciona_intestinalis
ENSOMEG00000013907	exosc1	98	45.078	ENSCSAVG00000010865	-	98	45.078	Ciona_savignyi
ENSOMEG00000013907	exosc1	98	65.318	ENSCANG00000034159	EXOSC1	97	65.318	Colobus_angolensis_palliatus
ENSOMEG00000013907	exosc1	98	64.162	ENSCGRG00001000335	Exosc1	97	64.162	Cricetulus_griseus_chok1gshd
ENSOMEG00000013907	exosc1	98	64.162	ENSCGRG00000011602	Exosc1	97	64.162	Cricetulus_griseus_crigri
ENSOMEG00000013907	exosc1	100	68.649	ENSCSEG00000007895	exosc1	97	68.649	Cynoglossus_semilaevis
ENSOMEG00000013907	exosc1	99	74.742	ENSCVAG00000016748	exosc1	100	74.742	Cyprinodon_variegatus
ENSOMEG00000013907	exosc1	99	74.227	ENSDARG00000059841	exosc1	100	74.227	Danio_rerio
ENSOMEG00000013907	exosc1	72	55.862	ENSDNOG00000007983	EXOSC1	98	55.862	Dasypus_novemcinctus
ENSOMEG00000013907	exosc1	98	64.162	ENSDORG00000016528	Exosc1	97	64.162	Dipodomys_ordii
ENSOMEG00000013907	exosc1	95	39.062	FBgn0032346	Csl4	93	39.062	Drosophila_melanogaster
ENSOMEG00000013907	exosc1	98	62.304	ENSETEG00000002469	-	98	62.304	Echinops_telfairi
ENSOMEG00000013907	exosc1	97	53.125	ENSEBUG00000008164	exosc1	96	53.125	Eptatretus_burgeri
ENSOMEG00000013907	exosc1	98	57.609	ENSEASG00005008684	EXOSC1	98	57.609	Equus_asinus_asinus
ENSOMEG00000013907	exosc1	51	40.860	ENSECAG00000010621	EXOSC1	59	40.860	Equus_caballus
ENSOMEG00000013907	exosc1	98	62.304	ENSEEUG00000005647	EXOSC1	98	62.304	Erinaceus_europaeus
ENSOMEG00000013907	exosc1	95	75.269	ENSELUG00000017369	exosc1	100	69.189	Esox_lucius
ENSOMEG00000013907	exosc1	98	63.874	ENSFCAG00000040563	EXOSC1	98	59.563	Felis_catus
ENSOMEG00000013907	exosc1	98	62.827	ENSFALG00000008450	EXOSC1	98	62.827	Ficedula_albicollis
ENSOMEG00000013907	exosc1	98	63.874	ENSFDAG00000000846	EXOSC1	98	63.874	Fukomys_damarensis
ENSOMEG00000013907	exosc1	99	73.711	ENSFHEG00000009154	exosc1	100	73.711	Fundulus_heteroclitus
ENSOMEG00000013907	exosc1	99	75.258	ENSGMOG00000008993	exosc1	100	75.258	Gadus_morhua
ENSOMEG00000013907	exosc1	98	56.906	ENSGALG00000039917	EXOSC1	99	64.828	Gallus_gallus
ENSOMEG00000013907	exosc1	100	74.359	ENSGAFG00000010265	exosc1	96	74.359	Gambusia_affinis
ENSOMEG00000013907	exosc1	99	73.196	ENSGACG00000018936	exosc1	100	73.196	Gasterosteus_aculeatus
ENSOMEG00000013907	exosc1	98	61.780	ENSGAGG00000019192	EXOSC1	98	61.780	Gopherus_agassizii
ENSOMEG00000013907	exosc1	98	56.906	ENSGGOG00000003099	EXOSC1	98	56.906	Gorilla_gorilla
ENSOMEG00000013907	exosc1	99	77.320	ENSHBUG00000017857	exosc1	100	77.320	Haplochromis_burtoni
ENSOMEG00000013907	exosc1	98	65.318	ENSHGLG00000016927	EXOSC1	97	65.318	Heterocephalus_glaber_female
ENSOMEG00000013907	exosc1	98	65.318	ENSHGLG00100012208	EXOSC1	97	65.318	Heterocephalus_glaber_male
ENSOMEG00000013907	exosc1	99	76.289	ENSHCOG00000019882	exosc1	100	76.289	Hippocampus_comes
ENSOMEG00000013907	exosc1	99	71.649	ENSIPUG00000007685	exosc1	100	71.649	Ictalurus_punctatus
ENSOMEG00000013907	exosc1	98	64.162	ENSSTOG00000006615	EXOSC1	97	64.162	Ictidomys_tridecemlineatus
ENSOMEG00000013907	exosc1	51	49.000	ENSSTOG00000029860	-	75	49.000	Ictidomys_tridecemlineatus
ENSOMEG00000013907	exosc1	98	63.351	ENSJJAG00000013311	Exosc1	98	63.351	Jaculus_jaculus
ENSOMEG00000013907	exosc1	100	73.846	ENSKMAG00000001202	exosc1	82	73.846	Kryptolebias_marmoratus
ENSOMEG00000013907	exosc1	99	79.032	ENSLBEG00000011448	exosc1	100	79.032	Labrus_bergylta
ENSOMEG00000013907	exosc1	99	69.231	ENSLOCG00000003776	exosc1	100	69.231	Lepisosteus_oculatus
ENSOMEG00000013907	exosc1	98	63.351	ENSLAFG00000015983	EXOSC1	98	63.351	Loxodonta_africana
ENSOMEG00000013907	exosc1	98	65.318	ENSMFAG00000001493	EXOSC1	97	65.318	Macaca_fascicularis
ENSOMEG00000013907	exosc1	98	65.318	ENSMMUG00000020028	EXOSC1	97	65.318	Macaca_mulatta
ENSOMEG00000013907	exosc1	98	63.874	ENSMNEG00000029816	EXOSC1	98	63.874	Macaca_nemestrina
ENSOMEG00000013907	exosc1	98	65.318	ENSMLEG00000027643	EXOSC1	98	64.550	Mandrillus_leucophaeus
ENSOMEG00000013907	exosc1	99	78.351	ENSMAMG00000012200	exosc1	100	78.351	Mastacembelus_armatus
ENSOMEG00000013907	exosc1	99	77.320	ENSMZEG00005007042	exosc1	100	77.320	Maylandia_zebra
ENSOMEG00000013907	exosc1	98	56.906	ENSMAUG00000020462	-	98	56.906	Mesocricetus_auratus
ENSOMEG00000013907	exosc1	98	64.162	ENSMICG00000007664	EXOSC1	97	64.162	Microcebus_murinus
ENSOMEG00000013907	exosc1	98	64.162	ENSMOCG00000006004	-	97	64.162	Microtus_ochrogaster
ENSOMEG00000013907	exosc1	96	63.388	ENSMOCG00000017124	-	96	63.388	Microtus_ochrogaster
ENSOMEG00000013907	exosc1	99	75.568	ENSMMOG00000021403	exosc1	100	75.568	Mola_mola
ENSOMEG00000013907	exosc1	98	63.021	ENSMODG00000004213	EXOSC1	98	63.021	Monodelphis_domestica
ENSOMEG00000013907	exosc1	94	76.757	ENSMALG00000007061	exosc1	93	76.757	Monopterus_albus
ENSOMEG00000013907	exosc1	98	63.584	MGP_CAROLIEiJ_G0022959	Exosc1	97	63.584	Mus_caroli
ENSOMEG00000013907	exosc1	98	63.584	ENSMUSG00000034321	Exosc1	97	63.584	Mus_musculus
ENSOMEG00000013907	exosc1	98	64.162	MGP_PahariEiJ_G0014449	Exosc1	97	64.162	Mus_pahari
ENSOMEG00000013907	exosc1	98	63.584	MGP_SPRETEiJ_G0023880	Exosc1	97	63.584	Mus_spretus
ENSOMEG00000013907	exosc1	98	63.874	ENSMPUG00000017044	EXOSC1	98	63.874	Mustela_putorius_furo
ENSOMEG00000013907	exosc1	98	63.351	ENSMLUG00000009228	EXOSC1	98	63.351	Myotis_lucifugus
ENSOMEG00000013907	exosc1	98	61.780	ENSNGAG00000022033	Exosc1	98	61.780	Nannospalax_galili
ENSOMEG00000013907	exosc1	100	79.661	ENSNBRG00000024007	exosc1	100	79.661	Neolamprologus_brichardi
ENSOMEG00000013907	exosc1	98	65.318	ENSNLEG00000013872	EXOSC1	97	65.318	Nomascus_leucogenys
ENSOMEG00000013907	exosc1	51	52.000	ENSMEUG00000002246	EXOSC1	87	52.000	Notamacropus_eugenii
ENSOMEG00000013907	exosc1	98	63.351	ENSOPRG00000005065	EXOSC1	98	63.351	Ochotona_princeps
ENSOMEG00000013907	exosc1	98	65.318	ENSODEG00000016709	EXOSC1	97	65.318	Octodon_degus
ENSOMEG00000013907	exosc1	100	77.436	ENSONIG00000017683	exosc1	100	77.436	Oreochromis_niloticus
ENSOMEG00000013907	exosc1	52	74.257	ENSOANG00000006563	EXOSC1	80	74.257	Ornithorhynchus_anatinus
ENSOMEG00000013907	exosc1	98	58.333	ENSOCUG00000026461	-	98	58.333	Oryctolagus_cuniculus
ENSOMEG00000013907	exosc1	98	61.979	ENSOCUG00000011898	-	98	61.979	Oryctolagus_cuniculus
ENSOMEG00000013907	exosc1	99	82.051	ENSORLG00000011595	exosc1	100	82.051	Oryzias_latipes
ENSOMEG00000013907	exosc1	99	81.538	ENSORLG00020005831	exosc1	100	81.538	Oryzias_latipes_hni
ENSOMEG00000013907	exosc1	99	81.538	ENSORLG00015004317	exosc1	100	81.538	Oryzias_latipes_hsok
ENSOMEG00000013907	exosc1	98	62.304	ENSOGAG00000016259	EXOSC1	98	62.304	Otolemur_garnettii
ENSOMEG00000013907	exosc1	98	63.874	ENSOARG00000010136	EXOSC1	98	63.874	Ovis_aries
ENSOMEG00000013907	exosc1	98	65.318	ENSPPAG00000039842	EXOSC1	97	65.318	Pan_paniscus
ENSOMEG00000013907	exosc1	98	63.874	ENSPPRG00000023366	EXOSC1	98	63.874	Panthera_pardus
ENSOMEG00000013907	exosc1	98	63.874	ENSPTIG00000017701	EXOSC1	98	63.874	Panthera_tigris_altaica
ENSOMEG00000013907	exosc1	98	65.318	ENSPTRG00000002808	EXOSC1	97	65.318	Pan_troglodytes
ENSOMEG00000013907	exosc1	98	65.318	ENSPANG00000021324	EXOSC1	97	65.318	Papio_anubis
ENSOMEG00000013907	exosc1	99	72.165	ENSPKIG00000016037	exosc1	100	72.165	Paramormyrops_kingsleyae
ENSOMEG00000013907	exosc1	90	55.789	ENSPSIG00000013571	EXOSC1	81	74.257	Pelodiscus_sinensis
ENSOMEG00000013907	exosc1	99	70.109	ENSPMGG00000014002	exosc1	100	70.109	Periophthalmus_magnuspinnatus
ENSOMEG00000013907	exosc1	98	64.162	ENSPEMG00000010710	-	97	64.162	Peromyscus_maniculatus_bairdii
ENSOMEG00000013907	exosc1	94	54.839	ENSPMAG00000000195	exosc1	95	54.839	Petromyzon_marinus
ENSOMEG00000013907	exosc1	98	62.304	ENSPCIG00000002210	EXOSC1	97	62.304	Phascolarctos_cinereus
ENSOMEG00000013907	exosc1	100	73.846	ENSPFOG00000006755	exosc1	96	73.846	Poecilia_formosa
ENSOMEG00000013907	exosc1	99	73.711	ENSPLAG00000005880	exosc1	100	73.711	Poecilia_latipinna
ENSOMEG00000013907	exosc1	100	73.846	ENSPMEG00000015598	exosc1	96	73.846	Poecilia_mexicana
ENSOMEG00000013907	exosc1	100	68.108	ENSPREG00000000405	exosc1	95	68.108	Poecilia_reticulata
ENSOMEG00000013907	exosc1	98	63.874	ENSPPYG00000002531	EXOSC1	98	63.874	Pongo_abelii
ENSOMEG00000013907	exosc1	98	62.304	ENSPCAG00000009135	EXOSC1	98	62.304	Procavia_capensis
ENSOMEG00000013907	exosc1	98	65.574	ENSPCOG00000027539	EXOSC1	98	65.574	Propithecus_coquereli
ENSOMEG00000013907	exosc1	98	63.351	ENSPVAG00000003372	EXOSC1	98	63.351	Pteropus_vampyrus
ENSOMEG00000013907	exosc1	99	77.320	ENSPNYG00000021745	exosc1	100	77.320	Pundamilia_nyererei
ENSOMEG00000013907	exosc1	99	72.680	ENSPNAG00000001944	exosc1	100	72.680	Pygocentrus_nattereri
ENSOMEG00000013907	exosc1	98	64.162	ENSRNOG00000048708	Exosc1	97	64.162	Rattus_norvegicus
ENSOMEG00000013907	exosc1	98	65.318	ENSRBIG00000035618	EXOSC1	97	65.318	Rhinopithecus_bieti
ENSOMEG00000013907	exosc1	98	65.318	ENSRROG00000032589	EXOSC1	97	65.318	Rhinopithecus_roxellana
ENSOMEG00000013907	exosc1	98	63.351	ENSSBOG00000000359	EXOSC1	98	63.351	Saimiri_boliviensis_boliviensis
ENSOMEG00000013907	exosc1	72	67.123	ENSSHAG00000018219	EXOSC1	99	67.123	Sarcophilus_harrisii
ENSOMEG00000013907	exosc1	99	71.649	ENSSFOG00015016289	-	100	71.649	Scleropages_formosus
ENSOMEG00000013907	exosc1	99	70.619	ENSSFOG00015009069	exosc1	100	70.619	Scleropages_formosus
ENSOMEG00000013907	exosc1	100	79.661	ENSSMAG00000003721	exosc1	100	79.661	Scophthalmus_maximus
ENSOMEG00000013907	exosc1	99	76.804	ENSSDUG00000002993	exosc1	100	76.804	Seriola_dumerili
ENSOMEG00000013907	exosc1	99	76.804	ENSSLDG00000025181	exosc1	100	76.804	Seriola_lalandi_dorsalis
ENSOMEG00000013907	exosc1	98	53.403	ENSSARG00000000162	EXOSC1	98	53.403	Sorex_araneus
ENSOMEG00000013907	exosc1	98	60.733	ENSSPUG00000012263	EXOSC1	98	60.733	Sphenodon_punctatus
ENSOMEG00000013907	exosc1	100	73.797	ENSSPAG00000016792	exosc1	84	73.797	Stegastes_partitus
ENSOMEG00000013907	exosc1	98	62.827	ENSSSCG00000010518	EXOSC1	89	62.827	Sus_scrofa
ENSOMEG00000013907	exosc1	98	61.257	ENSTGUG00000009692	EXOSC1	98	61.257	Taeniopygia_guttata
ENSOMEG00000013907	exosc1	97	65.263	ENSTRUG00000007706	exosc1	98	65.263	Takifugu_rubripes
ENSOMEG00000013907	exosc1	100	64.646	ENSTNIG00000014079	exosc1	99	64.646	Tetraodon_nigroviridis
ENSOMEG00000013907	exosc1	98	58.201	ENSTBEG00000006011	EXOSC1	98	58.201	Tupaia_belangeri
ENSOMEG00000013907	exosc1	93	63.934	ENSTTRG00000009887	EXOSC1	99	63.934	Tursiops_truncatus
ENSOMEG00000013907	exosc1	98	68.182	ENSUAMG00000010266	EXOSC1	98	68.182	Ursus_americanus
ENSOMEG00000013907	exosc1	98	68.000	ENSUMAG00000022002	EXOSC1	98	68.000	Ursus_maritimus
ENSOMEG00000013907	exosc1	98	63.351	ENSVVUG00000023192	EXOSC1	62	63.351	Vulpes_vulpes
ENSOMEG00000013907	exosc1	99	61.658	ENSXETG00000003434	exosc1	99	61.658	Xenopus_tropicalis
ENSOMEG00000013907	exosc1	53	75.490	ENSXCOG00000014499	exosc1	78	75.490	Xiphophorus_couchianus
ENSOMEG00000013907	exosc1	100	67.568	ENSXMAG00000023382	exosc1	95	67.568	Xiphophorus_maculatus