EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000013949 (Gene tree)
Gene ID: 112155845
Gene Symbol: si:ch211-212k18.5
Alias: -
Full Name: sal-like protein 4
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 8008 bases
Position: chrNVQA01000020.1:8893016-8901023
Accession: 112155845
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000029964	zf-C2H2	PF00096.26	1.9e-18	1	2
ENSOMEP00000029964	zf-C2H2	PF00096.26	1.9e-18	2	2
ENSOMEP00000029964	zf-met	PF12874.7	4.6e-11	1	2
ENSOMEP00000029964	zf-met	PF12874.7	4.6e-11	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000019932	-	5475	XM_024287808	ENSOMEP00000029964	1192 (aa)	XP_024143576	UPI000CF7E587

Gene Model

Click here to download ENSOMEG00000013949's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000013949's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000013949	si:ch211-212k18.5	67	46.265	ENSOMEG00000012904	sall2	65	43.608

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000013949	si:ch211-212k18.5	100	70.631	ENSAPOG00000013387	si:ch211-212k18.5	100	70.469	Acanthochromis_polyacanthus
ENSOMEG00000013949	si:ch211-212k18.5	54	46.847	ENSAPOG00000015347	sall2	54	47.497	Acanthochromis_polyacanthus
ENSOMEG00000013949	si:ch211-212k18.5	78	79.215	ENSACIG00000019922	si:ch211-212k18.5	96	78.959	Amphilophus_citrinellus
ENSOMEG00000013949	si:ch211-212k18.5	75	56.140	ENSAOCG00000016559	sall2	54	46.735	Amphiprion_ocellaris
ENSOMEG00000013949	si:ch211-212k18.5	100	69.050	ENSAOCG00000010737	si:ch211-212k18.5	100	68.806	Amphiprion_ocellaris
ENSOMEG00000013949	si:ch211-212k18.5	100	69.212	ENSAPEG00000006751	si:ch211-212k18.5	100	68.887	Amphiprion_percula
ENSOMEG00000013949	si:ch211-212k18.5	54	46.530	ENSAPEG00000020215	sall2	92	43.866	Amphiprion_percula
ENSOMEG00000013949	si:ch211-212k18.5	65	57.895	ENSATEG00000007303	sall2	66	43.939	Anabas_testudineus
ENSOMEG00000013949	si:ch211-212k18.5	76	78.429	ENSATEG00000001254	si:ch211-212k18.5	100	79.015	Anabas_testudineus
ENSOMEG00000013949	si:ch211-212k18.5	100	67.718	ENSACLG00000009709	si:ch211-212k18.5	100	69.551	Astatotilapia_calliptera
ENSOMEG00000013949	si:ch211-212k18.5	97	53.283	ENSAMXG00000010979	si:ch211-212k18.5	71	64.144	Astyanax_mexicanus
ENSOMEG00000013949	si:ch211-212k18.5	80	41.527	ENSAMXG00000020956	sall2	58	48.629	Astyanax_mexicanus
ENSOMEG00000013949	si:ch211-212k18.5	80	37.413	ENSCSEG00000021148	sall2	59	41.489	Cynoglossus_semilaevis
ENSOMEG00000013949	si:ch211-212k18.5	99	66.557	ENSCSEG00000004426	si:ch211-212k18.5	99	66.228	Cynoglossus_semilaevis
ENSOMEG00000013949	si:ch211-212k18.5	69	45.812	ENSCVAG00000006032	sall2	59	44.284	Cyprinodon_variegatus
ENSOMEG00000013949	si:ch211-212k18.5	99	69.100	ENSCVAG00000007475	si:ch211-212k18.5	99	68.974	Cyprinodon_variegatus
ENSOMEG00000013949	si:ch211-212k18.5	96	54.061	ENSDARG00000103316	si:ch211-212k18.5	95	53.170	Danio_rerio
ENSOMEG00000013949	si:ch211-212k18.5	64	48.784	ENSDARG00000075116	sall2	69	48.256	Danio_rerio
ENSOMEG00000013949	si:ch211-212k18.5	70	47.720	ENSELUG00000004389	sall2	66	47.992	Esox_lucius
ENSOMEG00000013949	si:ch211-212k18.5	98	55.257	ENSELUG00000024534	si:ch211-212k18.5	98	55.004	Esox_lucius
ENSOMEG00000013949	si:ch211-212k18.5	99	70.331	ENSFHEG00000017264	si:ch211-212k18.5	98	69.769	Fundulus_heteroclitus
ENSOMEG00000013949	si:ch211-212k18.5	99	69.655	ENSGAFG00000003746	si:ch211-212k18.5	99	68.485	Gambusia_affinis
ENSOMEG00000013949	si:ch211-212k18.5	59	57.692	ENSGAFG00000015194	sall2	59	43.750	Gambusia_affinis
ENSOMEG00000013949	si:ch211-212k18.5	100	68.208	ENSHBUG00000019672	si:ch211-212k18.5	100	70.319	Haplochromis_burtoni
ENSOMEG00000013949	si:ch211-212k18.5	99	58.632	ENSHCOG00000002842	si:ch211-212k18.5	99	57.644	Hippocampus_comes
ENSOMEG00000013949	si:ch211-212k18.5	97	52.159	ENSIPUG00000002559	sall2	96	50.458	Ictalurus_punctatus
ENSOMEG00000013949	si:ch211-212k18.5	64	45.644	ENSKMAG00000020172	sall2	59	43.278	Kryptolebias_marmoratus
ENSOMEG00000013949	si:ch211-212k18.5	99	69.869	ENSKMAG00000019657	si:ch211-212k18.5	99	69.622	Kryptolebias_marmoratus
ENSOMEG00000013949	si:ch211-212k18.5	100	66.992	ENSLBEG00000020887	si:ch211-212k18.5	100	65.721	Labrus_bergylta
ENSOMEG00000013949	si:ch211-212k18.5	59	56.364	ENSMAMG00000016229	sall2	59	44.129	Mastacembelus_armatus
ENSOMEG00000013949	si:ch211-212k18.5	71	79.045	ENSMAMG00000015887	si:ch211-212k18.5	99	79.395	Mastacembelus_armatus
ENSOMEG00000013949	si:ch211-212k18.5	100	67.799	ENSMZEG00005021214	si:ch211-212k18.5	100	69.633	Maylandia_zebra
ENSOMEG00000013949	si:ch211-212k18.5	90	77.964	ENSMMOG00000012726	si:ch211-212k18.5	99	77.517	Mola_mola
ENSOMEG00000013949	si:ch211-212k18.5	92	69.083	ENSMALG00000000979	si:ch211-212k18.5	97	68.122	Monopterus_albus
ENSOMEG00000013949	si:ch211-212k18.5	71	43.629	ENSNBRG00000017645	sall2	78	43.492	Neolamprologus_brichardi
ENSOMEG00000013949	si:ch211-212k18.5	99	65.141	ENSNBRG00000023948	si:ch211-212k18.5	99	66.415	Neolamprologus_brichardi
ENSOMEG00000013949	si:ch211-212k18.5	67	45.515	ENSORLG00000026871	sall2	58	45.174	Oryzias_latipes
ENSOMEG00000013949	si:ch211-212k18.5	100	90.067	ENSORLG00000030429	si:ch211-212k18.5	100	89.716	Oryzias_latipes
ENSOMEG00000013949	si:ch211-212k18.5	100	89.482	ENSORLG00020008145	si:ch211-212k18.5	100	89.298	Oryzias_latipes_hni
ENSOMEG00000013949	si:ch211-212k18.5	66	45.600	ENSORLG00020007873	sall2	58	45.333	Oryzias_latipes_hni
ENSOMEG00000013949	si:ch211-212k18.5	100	89.399	ENSORLG00015004982	si:ch211-212k18.5	100	89.130	Oryzias_latipes_hsok
ENSOMEG00000013949	si:ch211-212k18.5	66	45.794	ENSORLG00015002422	sall2	58	45.369	Oryzias_latipes_hsok
ENSOMEG00000013949	si:ch211-212k18.5	95	63.246	ENSPMGG00000018714	si:ch211-212k18.5	99	62.105	Periophthalmus_magnuspinnatus
ENSOMEG00000013949	si:ch211-212k18.5	58	58.000	ENSPFOG00000016504	sall2	61	45.109	Poecilia_formosa
ENSOMEG00000013949	si:ch211-212k18.5	99	69.572	ENSPFOG00000023705	si:ch211-212k18.5	99	69.330	Poecilia_formosa
ENSOMEG00000013949	si:ch211-212k18.5	99	69.597	ENSPLAG00000002577	si:ch211-212k18.5	99	68.684	Poecilia_latipinna
ENSOMEG00000013949	si:ch211-212k18.5	58	58.000	ENSPLAG00000018320	sall2	59	44.706	Poecilia_latipinna
ENSOMEG00000013949	si:ch211-212k18.5	58	58.000	ENSPMEG00000006335	sall2	59	44.444	Poecilia_mexicana
ENSOMEG00000013949	si:ch211-212k18.5	99	69.408	ENSPMEG00000016395	si:ch211-212k18.5	99	69.244	Poecilia_mexicana
ENSOMEG00000013949	si:ch211-212k18.5	61	58.000	ENSPREG00000021908	sall2	61	44.207	Poecilia_reticulata
ENSOMEG00000013949	si:ch211-212k18.5	99	70.337	ENSPREG00000005292	si:ch211-212k18.5	99	68.822	Poecilia_reticulata
ENSOMEG00000013949	si:ch211-212k18.5	100	65.528	ENSPNYG00000021576	si:ch211-212k18.5	100	66.776	Pundamilia_nyererei
ENSOMEG00000013949	si:ch211-212k18.5	95	54.639	ENSPNAG00000006123	si:ch211-212k18.5	99	52.370	Pygocentrus_nattereri
ENSOMEG00000013949	si:ch211-212k18.5	64	46.797	ENSPNAG00000021463	sall2	67	49.003	Pygocentrus_nattereri
ENSOMEG00000013949	si:ch211-212k18.5	100	67.828	ENSSMAG00000006241	si:ch211-212k18.5	100	67.397	Scophthalmus_maximus
ENSOMEG00000013949	si:ch211-212k18.5	75	57.895	ENSSDUG00000012274	sall2	55	46.970	Seriola_dumerili
ENSOMEG00000013949	si:ch211-212k18.5	100	70.379	ENSSDUG00000006164	si:ch211-212k18.5	100	69.984	Seriola_dumerili
ENSOMEG00000013949	si:ch211-212k18.5	75	57.895	ENSSLDG00000001653	sall2	55	46.650	Seriola_lalandi_dorsalis
ENSOMEG00000013949	si:ch211-212k18.5	100	72.155	ENSSLDG00000003393	si:ch211-212k18.5	100	71.590	Seriola_lalandi_dorsalis
ENSOMEG00000013949	si:ch211-212k18.5	59	56.140	ENSSPAG00000023009	sall2	54	46.332	Stegastes_partitus
ENSOMEG00000013949	si:ch211-212k18.5	98	69.573	ENSSPAG00000013435	si:ch211-212k18.5	97	70.736	Stegastes_partitus
ENSOMEG00000013949	si:ch211-212k18.5	54	43.342	ENSTRUG00000024556	sall2	59	43.684	Takifugu_rubripes
ENSOMEG00000013949	si:ch211-212k18.5	73	72.082	ENSTRUG00000025082	si:ch211-212k18.5	85	69.338	Takifugu_rubripes
ENSOMEG00000013949	si:ch211-212k18.5	99	67.931	ENSXCOG00000000762	si:ch211-212k18.5	100	66.855	Xiphophorus_couchianus
ENSOMEG00000013949	si:ch211-212k18.5	54	45.443	ENSXMAG00000000902	sall2	59	43.896	Xiphophorus_maculatus
ENSOMEG00000013949	si:ch211-212k18.5	99	69.827	ENSXMAG00000001461	si:ch211-212k18.5	100	67.522	Xiphophorus_maculatus