EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSOMEG00000013975 (Gene tree)
Gene ID
112138852
Gene Symbol
-
Alias
-
Full Name
pre-rRNA-processing protein TSR2 homolog
Gene Type
protein_coding
Species
Oryzias_melastigma
Status
putative
Strand
Plus strand
Length
2067 bases
Position
chrNVQA01001806.1:1217-3283
Accession
112138852
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSOMEP00000012592WGGPF10273.98.5e-2411
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSOMET00000019987-1275-ENSOMEP00000012592174 (aa)XP_024117280UPI000CF7BD61
Gene Model
Click here to download ENSOMEG00000013975's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000013975's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSOMEG00000013975-10099.425ENSOMEG00000011483tsr210099.425
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSOMEG00000013975-10043.979ENSG00000158526TSR210042.932Homo_sapiens
ENSOMEG00000013975-9257.143ENSAPOG00000004150-9557.143Acanthochromis_polyacanthus
ENSOMEG00000013975-9943.850ENSAMEG00000002469TSR29942.781Ailuropoda_melanoleuca
ENSOMEG00000013975-8075.714ENSACIG00000004880tsr29775.714Amphilophus_citrinellus
ENSOMEG00000013975-10066.857ENSAOCG00000015893tsr29766.857Amphiprion_ocellaris
ENSOMEG00000013975-10066.857ENSAPEG00000023549tsr29766.857Amphiprion_percula
ENSOMEG00000013975-10073.563ENSATEG00000019009-10073.563Anabas_testudineus
ENSOMEG00000013975-10048.677ENSACAG00000012270TSR29947.849Anolis_carolinensis
ENSOMEG00000013975-10043.455ENSANAG00000000062TSR210042.408Aotus_nancymaae
ENSOMEG00000013975-10072.414ENSACLG00000014269tsr210072.414Astatotilapia_calliptera
ENSOMEG00000013975-9954.255ENSAMXG00000016817tsr28852.660Astyanax_mexicanus
ENSOMEG00000013975-8638.158ENSBTAG00000018311-7341.481Bos_taurus
ENSOMEG00000013975-10045.550ENSBTAG00000015858TSR210044.503Bos_taurus
ENSOMEG00000013975-10043.455ENSCJAG00000000251TSR210042.408Callithrix_jacchus
ENSOMEG00000013975-9944.385ENSCAFG00000016440TSR29943.850Canis_familiaris
ENSOMEG00000013975-9944.385ENSCAFG00020014044TSR29943.850Canis_lupus_dingo
ENSOMEG00000013975-8536.913ENSCHIG00000009963-6740.625Capra_hircus
ENSOMEG00000013975-9342.778ENSTSYG00000031321-9541.667Carlito_syrichta
ENSOMEG00000013975-9744.086ENSTSYG00000005670-9643.011Carlito_syrichta
ENSOMEG00000013975-9540.761ENSTSYG00000031644-9940.217Carlito_syrichta
ENSOMEG00000013975-9544.886ENSCPOG00000033139TSR29444.886Cavia_porcellus
ENSOMEG00000013975-10043.455ENSCCAG00000025421TSR210042.408Cebus_capucinus
ENSOMEG00000013975-10041.885ENSCATG00000045152-9940.838Cercocebus_atys
ENSOMEG00000013975-10043.979ENSCATG00000036868-10042.932Cercocebus_atys
ENSOMEG00000013975-9942.021ENSCLAG00000007235TSR29644.134Chinchilla_lanigera
ENSOMEG00000013975-6948.760ENSCSAG00000012366-7746.259Chlorocebus_sabaeus
ENSOMEG00000013975-9541.989ENSCSAG00000000402-9540.884Chlorocebus_sabaeus
ENSOMEG00000013975-9943.386ENSCHOG00000001068TSR29941.667Choloepus_hoffmanni
ENSOMEG00000013975-6634.211ENSCING00000002386-5934.211Ciona_intestinalis
ENSOMEG00000013975-8438.554ENSCANG00000036773-8837.195Colobus_angolensis_palliatus
ENSOMEG00000013975-10043.979ENSCANG00000043156-10042.932Colobus_angolensis_palliatus
ENSOMEG00000013975-10042.564ENSCGRG00001023321Tsr210041.538Cricetulus_griseus_chok1gshd
ENSOMEG00000013975-10041.414ENSCGRG00000010855Tsr210040.909Cricetulus_griseus_crigri
ENSOMEG00000013975-9959.659ENSCSEG00000017003tsr29961.494Cynoglossus_semilaevis
ENSOMEG00000013975-10071.839ENSCVAG00000001845tsr210071.839Cyprinodon_variegatus
ENSOMEG00000013975-9850.000ENSDARG00000005772tsr29558.621Danio_rerio
ENSOMEG00000013975-9643.094ENSDORG00000025574Tsr29541.989Dipodomys_ordii
ENSOMEG00000013975-9942.408ENSETEG00000018510TSR29643.548Echinops_telfairi
ENSOMEG00000013975-9839.444ENSEBUG00000012895tsr29542.045Eptatretus_burgeri
ENSOMEG00000013975-9645.055ENSEASG00005013005TSR29544.505Equus_asinus_asinus
ENSOMEG00000013975-9645.055ENSECAG00000029844TSR28244.505Equus_caballus
ENSOMEG00000013975-10054.144ENSELUG00000007768tsr210054.696Esox_lucius
ENSOMEG00000013975-9943.850ENSFCAG00000002226TSR29943.316Felis_catus
ENSOMEG00000013975-9643.820ENSFDAG00000011554TSR29543.820Fukomys_damarensis
ENSOMEG00000013975-5165.909ENSGMOG00000007150tsr29965.909Gadus_morhua
ENSOMEG00000013975-10067.816ENSGACG00000000595tsr210067.816Gasterosteus_aculeatus
ENSOMEG00000013975-7054.032ENSGAGG00000007629TSR27950.000Gopherus_agassizii
ENSOMEG00000013975-10043.979ENSGGOG00000041368TSR210042.932Gorilla_gorilla
ENSOMEG00000013975-10072.159ENSHBUG00000020989tsr28072.159Haplochromis_burtoni
ENSOMEG00000013975-9942.308ENSHGLG00000002188TSR29843.407Heterocephalus_glaber_female
ENSOMEG00000013975-9942.308ENSHGLG00100001234TSR29843.407Heterocephalus_glaber_male
ENSOMEG00000013975-8065.714ENSHCOG00000017585-6665.714Hippocampus_comes
ENSOMEG00000013975-10047.692ENSIPUG00000012170tsr210050.259Ictalurus_punctatus
ENSOMEG00000013975-9942.188ENSSTOG00000033612TSR29842.188Ictidomys_tridecemlineatus
ENSOMEG00000013975-9641.935ENSJJAG00000004561Tsr29541.398Jaculus_jaculus
ENSOMEG00000013975-10074.286ENSKMAG00000012611-10074.286Kryptolebias_marmoratus
ENSOMEG00000013975-7476.562ENSLBEG00000017316tsr25676.471Labrus_bergylta
ENSOMEG00000013975-9545.810ENSLAFG00000018093TSR29445.810Loxodonta_africana
ENSOMEG00000013975-10043.979ENSMFAG00000001364TSR210042.932Macaca_fascicularis
ENSOMEG00000013975-10042.408ENSMMUG00000010044-10041.361Macaca_mulatta
ENSOMEG00000013975-10043.979ENSMMUG00000012612TSR210042.932Macaca_mulatta
ENSOMEG00000013975-10043.979ENSMNEG00000041996TSR210042.932Macaca_nemestrina
ENSOMEG00000013975-10043.979ENSMLEG00000032632TSR210042.932Mandrillus_leucophaeus
ENSOMEG00000013975-10070.690ENSMAMG00000011540tsr210070.690Mastacembelus_armatus
ENSOMEG00000013975-10072.414ENSMZEG00005026752tsr210072.414Maylandia_zebra
ENSOMEG00000013975-10043.434ENSMAUG00000012389Tsr210042.424Mesocricetus_auratus
ENSOMEG00000013975-10044.271ENSMICG00000010116TSR210043.229Microcebus_murinus
ENSOMEG00000013975-10042.564ENSMOCG00000006662Tsr210041.026Microtus_ochrogaster
ENSOMEG00000013975-10061.494ENSMMOG00000009751-10061.494Mola_mola
ENSOMEG00000013975-10042.021ENSMODG00000020894-10042.021Monodelphis_domestica
ENSOMEG00000013975-10067.241ENSMALG00000014552tsr210067.241Monopterus_albus
ENSOMEG00000013975-10042.564MGP_CAROLIEiJ_G0033491Tsr210042.564Mus_caroli
ENSOMEG00000013975-10043.077ENSMUSG00000025264Tsr210042.564Mus_musculus
ENSOMEG00000013975-10042.424MGP_PahariEiJ_G0032030Tsr210042.051Mus_pahari
ENSOMEG00000013975-10043.077MGP_SPRETEiJ_G0034661Tsr210042.564Mus_spretus
ENSOMEG00000013975-9744.505ENSMPUG00000011436TSR29643.956Mustela_putorius_furo
ENSOMEG00000013975-9343.750ENSMLUG00000010613TSR29341.477Myotis_lucifugus
ENSOMEG00000013975-9643.169ENSNGAG00000021351Tsr29542.077Nannospalax_galili
ENSOMEG00000013975-10071.264ENSNBRG00000007965tsr210071.264Neolamprologus_brichardi
ENSOMEG00000013975-10043.979ENSNLEG00000030041TSR210042.932Nomascus_leucogenys
ENSOMEG00000013975-6341.441ENSMEUG00000006729-9837.705Notamacropus_eugenii
ENSOMEG00000013975-6042.857ENSMEUG00000000188-10041.892Notamacropus_eugenii
ENSOMEG00000013975-6744.828ENSOPRG00000016595TSR28944.828Ochotona_princeps
ENSOMEG00000013975-9543.182ENSODEG00000014931-9843.182Octodon_degus
ENSOMEG00000013975-9942.246ENSODEG00000000542-9843.316Octodon_degus
ENSOMEG00000013975-9340.698ENSODEG00000019951-10040.698Octodon_degus
ENSOMEG00000013975-10074.286ENSONIG00000000763tsr210074.286Oreochromis_niloticus
ENSOMEG00000013975-6654.783ENSOANG00000000707TSR28254.783Ornithorhynchus_anatinus
ENSOMEG00000013975-9943.915ENSOCUG00000027678-9943.386Oryctolagus_cuniculus
ENSOMEG00000013975-8642.424ENSOCUG00000014714-10041.212Oryctolagus_cuniculus
ENSOMEG00000013975-10090.230ENSORLG00000022662tsr210090.230Oryzias_latipes
ENSOMEG00000013975-10089.655ENSORLG00020003033tsr210089.655Oryzias_latipes_hni
ENSOMEG00000013975-10089.655ENSORLG00015017253tsr210089.655Oryzias_latipes_hsok
ENSOMEG00000013975-10043.979ENSOGAG00000003468TSR210043.979Otolemur_garnettii
ENSOMEG00000013975-8736.129ENSOARG00000009487-6939.344Ovis_aries
ENSOMEG00000013975-10044.503ENSOARG00000006467-10043.455Ovis_aries
ENSOMEG00000013975-10043.979ENSPPAG00000021242TSR210042.932Pan_paniscus
ENSOMEG00000013975-9943.850ENSPPRG00000001337TSR29943.316Panthera_pardus
ENSOMEG00000013975-9943.316ENSPTIG00000007138TSR29842.781Panthera_tigris_altaica
ENSOMEG00000013975-10043.979ENSPTRG00000045904TSR210042.932Pan_troglodytes
ENSOMEG00000013975-9541.989ENSPANG00000002291-9840.884Papio_anubis
ENSOMEG00000013975-10043.979ENSPANG00000008042-10042.932Papio_anubis
ENSOMEG00000013975-9947.340ENSPKIG00000023676tsr29949.468Paramormyrops_kingsleyae
ENSOMEG00000013975-9951.445ENSPMGG00000002963tsr29953.179Periophthalmus_magnuspinnatus
ENSOMEG00000013975-9641.398ENSPEMG00000015713Tsr29543.011Peromyscus_maniculatus_bairdii
ENSOMEG00000013975-9540.437ENSPMAG00000001705tsr29238.251Petromyzon_marinus
ENSOMEG00000013975-9838.660ENSPCIG00000024314-9038.378Phascolarctos_cinereus
ENSOMEG00000013975-10069.832ENSPFOG00000011824tsr210069.832Poecilia_formosa
ENSOMEG00000013975-10071.429ENSPLAG00000023520tsr210071.429Poecilia_latipinna
ENSOMEG00000013975-10070.286ENSPMEG00000000360tsr210070.286Poecilia_mexicana
ENSOMEG00000013975-10071.429ENSPREG00000013009tsr210071.429Poecilia_reticulata
ENSOMEG00000013975-10043.979ENSPPYG00000020381-7242.932Pongo_abelii
ENSOMEG00000013975-10043.979ENSPCOG00000002354TSR210042.932Propithecus_coquereli
ENSOMEG00000013975-6846.667ENSPVAG00000000034TSR29946.667Pteropus_vampyrus
ENSOMEG00000013975-10072.159ENSPNYG00000019995tsr28072.159Pundamilia_nyererei
ENSOMEG00000013975-10051.337ENSPNAG00000024167tsr210049.198Pygocentrus_nattereri
ENSOMEG00000013975-10043.077ENSRNOG00000002556NEWGENE_156241610043.077Rattus_norvegicus
ENSOMEG00000013975-10038.144ENSRBIG00000003999-8938.144Rhinopithecus_bieti
ENSOMEG00000013975-10043.979ENSRBIG00000024521-10042.932Rhinopithecus_bieti
ENSOMEG00000013975-10043.979ENSRROG00000029439-10042.932Rhinopithecus_roxellana
ENSOMEG00000013975-10039.175ENSRROG00000033469-9238.144Rhinopithecus_roxellana
ENSOMEG00000013975-10043.455ENSSBOG00000019737TSR210042.408Saimiri_boliviensis_boliviensis
ENSOMEG00000013975-8640.854ENSSHAG00000004824-9940.854Sarcophilus_harrisii
ENSOMEG00000013975-9846.739ENSSFOG00015002207tsr29949.198Scleropages_formosus
ENSOMEG00000013975-10072.159ENSSMAG00000012882tsr210073.864Scophthalmus_maximus
ENSOMEG00000013975-10074.576ENSSDUG00000019445tsr210074.576Seriola_dumerili
ENSOMEG00000013975-10073.596ENSSLDG00000005598tsr210073.596Seriola_lalandi_dorsalis
ENSOMEG00000013975-9746.591ENSSPUG00000019286TSR29649.153Sphenodon_punctatus
ENSOMEG00000013975-9943.784ENSSSCG00000012334TSR29942.857Sus_scrofa
ENSOMEG00000013975-10068.927ENSTRUG00000008947tsr210068.927Takifugu_rubripes
ENSOMEG00000013975-9066.038ENSTNIG00000002173-10066.038Tetraodon_nigroviridis
ENSOMEG00000013975-6948.760ENSTBEG00000016242TSR29643.750Tupaia_belangeri
ENSOMEG00000013975-10034.225ENSTTRG00000003274TSR210033.690Tursiops_truncatus
ENSOMEG00000013975-9945.789ENSUAMG00000009605TSR29944.737Ursus_americanus
ENSOMEG00000013975-9945.789ENSUMAG00000019189TSR29944.737Ursus_maritimus
ENSOMEG00000013975-9438.333ENSVPAG00000007532TSR210037.778Vicugna_pacos
ENSOMEG00000013975-9941.579ENSVVUG00000002247TSR29841.053Vulpes_vulpes
ENSOMEG00000013975-10044.737ENSXETG00000033574TSR29944.211Xenopus_tropicalis
ENSOMEG00000013975-10071.429ENSXMAG00000024827tsr29171.429Xiphophorus_maculatus

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