EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOMEG00000014110 (Gene tree)
Gene ID: 112143047
Gene Symbol: srrm1
Alias: -
Full Name: serine/arginine repetitive matrix 1
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 10150 bases
Position: chrNVQA01000001.1:17696810-17706959
Accession: ZDB-GENE-040426-2789
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000012648	PWI	PF01480.17	1.8e-30	1	1
ENSOMEP00000030017	PWI	PF01480.17	1.7e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000020029	-	318	-	ENSOMEP00000030017	105 (aa)	-	-
ENSOMET00000020046	-	2481	-	ENSOMEP00000012648	826 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000014110's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000014110's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000014110	srrm1	74	100.000	ENSAPOG00000001170	srrm1	99	100.000	Acanthochromis_polyacanthus
ENSOMEG00000014110	srrm1	74	96.154	ENSDARG00000001244	srrm1	99	96.154	Danio_rerio
ENSOMEG00000014110	srrm1	74	97.436	ENSELUG00000003385	srrm1	99	97.436	Esox_lucius
ENSOMEG00000014110	srrm1	74	100.000	ENSGACG00000007266	srrm1	71	82.927	Gasterosteus_aculeatus
ENSOMEG00000014110	srrm1	74	100.000	ENSORLG00015014743	srrm1	57	76.104	Oryzias_latipes_hsok
ENSOMEG00000014110	srrm1	78	96.341	ENSPLAG00000002058	srrm1	81	96.341	Poecilia_latipinna
ENSOMEG00000014110	srrm1	74	100.000	ENSPLAG00000006807	srrm1	99	100.000	Poecilia_latipinna
ENSOMEG00000014110	srrm1	74	100.000	ENSPREG00000002652	srrm1	57	53.965	Poecilia_reticulata
ENSOMEG00000014110	srrm1	74	100.000	ENSXCOG00000011828	srrm1	99	84.016	Xiphophorus_couchianus