EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOMEG00000014332 (Gene tree)
Gene ID: 112141214
Gene Symbol: rbm42
Alias: -
Full Name: RNA binding motif protein 42
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 8232 bases
Position: chrNVQA01006436.1:198259-206490
Accession: ZDB-GENE-040809-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000030202	RRM_1	PF00076.22	2.8e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000032934	-	795	-	ENSOMEP00000030202	264 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000014332's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000014332's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000014332	rbm42	95	81.395	ENSAPOG00000015109	rbm42	59	84.362	Acanthochromis_polyacanthus
ENSOMEG00000014332	rbm42	100	78.947	ENSACIG00000010771	rbm42	60	84.232	Amphilophus_citrinellus
ENSOMEG00000014332	rbm42	96	80.695	ENSAOCG00000008873	rbm42	70	74.737	Amphiprion_ocellaris
ENSOMEG00000014332	rbm42	96	80.695	ENSAPEG00000012051	rbm42	69	74.737	Amphiprion_percula
ENSOMEG00000014332	rbm42	91	88.285	ENSATEG00000000536	rbm42	59	88.285	Anabas_testudineus
ENSOMEG00000014332	rbm42	99	80.228	ENSACLG00000004988	rbm42	60	84.647	Astatotilapia_calliptera
ENSOMEG00000014332	rbm42	84	83.929	ENSAMXG00000016545	rbm42	60	81.974	Astyanax_mexicanus
ENSOMEG00000014332	rbm42	58	83.007	ENSCGRG00000016763	-	56	88.889	Cricetulus_griseus_crigri
ENSOMEG00000014332	rbm42	97	76.894	ENSCSEG00000010248	rbm42	72	72.727	Cynoglossus_semilaevis
ENSOMEG00000014332	rbm42	84	85.268	ENSCVAG00000015589	rbm42	60	80.408	Cyprinodon_variegatus
ENSOMEG00000014332	rbm42	88	80.172	ENSDARG00000039910	rbm42	70	69.718	Danio_rerio
ENSOMEG00000014332	rbm42	87	79.237	ENSELUG00000022403	rbm42	56	79.237	Esox_lucius
ENSOMEG00000014332	rbm42	84	85.778	ENSFHEG00000006764	rbm42	85	79.921	Fundulus_heteroclitus
ENSOMEG00000014332	rbm42	84	83.482	ENSGMOG00000012660	rbm42	58	82.553	Gadus_morhua
ENSOMEG00000014332	rbm42	94	79.608	ENSGAFG00000009059	rbm42	83	79.608	Gambusia_affinis
ENSOMEG00000014332	rbm42	100	77.612	ENSGACG00000004170	rbm42	66	82.589	Gasterosteus_aculeatus
ENSOMEG00000014332	rbm42	99	79.848	ENSHBUG00000011141	rbm42	60	84.232	Haplochromis_burtoni
ENSOMEG00000014332	rbm42	95	77.734	ENSHCOG00000021214	rbm42	63	74.016	Hippocampus_comes
ENSOMEG00000014332	rbm42	84	82.063	ENSIPUG00000022365	rbm42	53	82.432	Ictalurus_punctatus
ENSOMEG00000014332	rbm42	72	85.340	ENSKMAG00000015287	rbm42	52	84.293	Kryptolebias_marmoratus
ENSOMEG00000014332	rbm42	81	89.767	ENSLBEG00000004578	-	71	81.250	Labrus_bergylta
ENSOMEG00000014332	rbm42	81	89.767	ENSLBEG00000017547	rbm42	63	81.250	Labrus_bergylta
ENSOMEG00000014332	rbm42	90	74.790	ENSLOCG00000003368	rbm42	52	78.636	Lepisosteus_oculatus
ENSOMEG00000014332	rbm42	91	83.884	ENSMAMG00000006708	rbm42	59	84.647	Mastacembelus_armatus
ENSOMEG00000014332	rbm42	99	80.228	ENSMZEG00005025234	rbm42	60	84.647	Maylandia_zebra
ENSOMEG00000014332	rbm42	97	79.151	ENSMALG00000015720	rbm42	77	74.912	Monopterus_albus
ENSOMEG00000014332	rbm42	97	78.927	ENSONIG00000008029	rbm42	59	83.402	Oreochromis_niloticus
ENSOMEG00000014332	rbm42	91	83.817	ENSORLG00020022507	rbm42	56	83.817	Oryzias_latipes_hni
ENSOMEG00000014332	rbm42	97	88.803	ENSORLG00015000659	rbm42	60	94.191	Oryzias_latipes_hsok
ENSOMEG00000014332	rbm42	91	76.923	ENSPKIG00000015165	rbm42	60	76.923	Paramormyrops_kingsleyae
ENSOMEG00000014332	rbm42	86	71.552	ENSPMGG00000003569	rbm42	55	97.143	Periophthalmus_magnuspinnatus
ENSOMEG00000014332	rbm42	80	56.682	ENSPMAG00000008633	rbm42	60	58.150	Petromyzon_marinus
ENSOMEG00000014332	rbm42	94	80.392	ENSPFOG00000007701	rbm42	64	80.392	Poecilia_formosa
ENSOMEG00000014332	rbm42	94	80.392	ENSPLAG00000009405	rbm42	64	80.392	Poecilia_latipinna
ENSOMEG00000014332	rbm42	94	80.392	ENSPMEG00000010375	rbm42	64	80.392	Poecilia_mexicana
ENSOMEG00000014332	rbm42	94	80.392	ENSPREG00000018102	rbm42	68	79.608	Poecilia_reticulata
ENSOMEG00000014332	rbm42	99	80.228	ENSPNYG00000014460	rbm42	60	84.647	Pundamilia_nyererei
ENSOMEG00000014332	rbm42	96	76.953	ENSPNAG00000009961	rbm42	55	81.034	Pygocentrus_nattereri
ENSOMEG00000014332	rbm42	91	76.923	ENSSFOG00015019227	rbm42	60	76.923	Scleropages_formosus
ENSOMEG00000014332	rbm42	91	82.305	ENSSMAG00000011935	rbm42	59	80.913	Scophthalmus_maximus
ENSOMEG00000014332	rbm42	97	81.853	ENSSDUG00000004033	rbm42	59	86.667	Seriola_dumerili
ENSOMEG00000014332	rbm42	97	82.879	ENSSLDG00000009918	rbm42	66	85.714	Seriola_lalandi_dorsalis
ENSOMEG00000014332	rbm42	96	81.081	ENSSPAG00000019871	rbm42	59	84.362	Stegastes_partitus
ENSOMEG00000014332	rbm42	84	64.800	ENSTNIG00000011669	rbm42	57	68.548	Tetraodon_nigroviridis
ENSOMEG00000014332	rbm42	84	72.321	ENSXETG00000017599	rbm42	57	69.959	Xenopus_tropicalis
ENSOMEG00000014332	rbm42	94	80.392	ENSXMAG00000012827	rbm42	68	80.000	Xiphophorus_maculatus