EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSOMEG00000014410 (Gene tree)
Gene ID
112149201
Gene Symbol
pabpc4
Alias
-
Full Name
poly(A) binding protein cytoplasmic 4
Gene Type
protein_coding
Species
Oryzias_melastigma
Status
putative
Strand
Minus strand
Length
9745 bases
Position
chrNVQA01000001.1:17626250-17635994
Accession
112149201
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSOMEP00000030220PABPPF00658.185.4e-3111
ENSOMEP00000030230PABPPF00658.185.9e-3111
ENSOMEP00000030249PABPPF00658.185.9e-3111
ENSOMEP00000030220RRM_5PF13893.61.2e-0911
ENSOMEP00000030230RRM_5PF13893.61.5e-0911
ENSOMEP00000030249RRM_5PF13893.61.5e-0911
ENSOMEP00000030220RRM_1PF00076.224.8e-9014
ENSOMEP00000030220RRM_1PF00076.224.8e-9024
ENSOMEP00000030220RRM_1PF00076.224.8e-9034
ENSOMEP00000030220RRM_1PF00076.224.8e-9044
ENSOMEP00000030230RRM_1PF00076.226.1e-9014
ENSOMEP00000030230RRM_1PF00076.226.1e-9024
ENSOMEP00000030230RRM_1PF00076.226.1e-9034
ENSOMEP00000030230RRM_1PF00076.226.1e-9044
ENSOMEP00000030249RRM_1PF00076.226.1e-9014
ENSOMEP00000030249RRM_1PF00076.226.1e-9024
ENSOMEP00000030249RRM_1PF00076.226.1e-9034
ENSOMEP00000030249RRM_1PF00076.226.1e-9044
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSOMET00000020463-2848-ENSOMEP00000030249628 (aa)-UPI000CF7D0B6
ENSOMET00000020408-1806-ENSOMEP00000030220601 (aa)--
ENSOMET00000020420-2759XM_024276751ENSOMEP00000030230628 (aa)XP_024132519UPI000CF7D0B6
Gene Model
Click here to download ENSOMEG00000014410's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000014410's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSOMEG00000014410pabpc47630.220ENSOMEG00000020931tia16830.220
ENSOMEG00000014410pabpc46134.737ENSOMEG00000021369rbms2a5033.981
ENSOMEG00000014410pabpc49868.858ENSOMEG00000013627pabpc1b9782.796
ENSOMEG00000014410pabpc46436.364ENSOMEG00000009131celf3b6836.364
ENSOMEG00000014410pabpc49875.796ENSOMEG00000020219pabpc1a9875.478
ENSOMEG00000014410pabpc49863.308ENSOMEG00000010789pabpc1l10062.500
ENSOMEG00000014410pabpc45530.769ENSOMEG00000015870rbm455830.769
ENSOMEG00000014410pabpc46134.940ENSOMEG00000009988elavl48134.940
ENSOMEG00000014410pabpc46236.145ENSOMEG00000005178ELAVL28536.145
ENSOMEG00000014410pabpc45330.345ENSOMEG00000016815TIAL15630.137
ENSOMEG00000014410pabpc46137.500ENSOMEG00000023599-5937.500
ENSOMEG00000014410pabpc45137.500ENSOMEG00000019511celf5a7937.500
ENSOMEG00000014410pabpc46030.435ENSOMEG00000007873trnau1apa5630.435
ENSOMEG00000014410pabpc46236.145ENSOMEG00000023959elavl39236.145
ENSOMEG00000014410pabpc46233.010ENSOMEG00000007677-5433.684
ENSOMEG00000014410pabpc46333.981ENSOMEG00000016468rbms2b5933.981
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSOMEG00000014410pabpc49985.096ENSG00000090621PABPC49996.396Homo_sapiens
ENSOMEG00000014410pabpc49895.955ENSAPOG00000001161pabpc49995.955Acanthochromis_polyacanthus
ENSOMEG00000014410pabpc49983.266ENSAMEG00000011535-9979.697Ailuropoda_melanoleuca
ENSOMEG00000014410pabpc49850.403ENSAMEG00000015083-9849.838Ailuropoda_melanoleuca
ENSOMEG00000014410pabpc410094.945ENSACIG00000023343pabpc410094.945Amphilophus_citrinellus
ENSOMEG00000014410pabpc49896.117ENSAOCG00000021529pabpc49996.117Amphiprion_ocellaris
ENSOMEG00000014410pabpc49896.117ENSAPEG00000019196pabpc49996.117Amphiprion_percula
ENSOMEG00000014410pabpc49895.153ENSATEG00000007402pabpc49995.153Anabas_testudineus
ENSOMEG00000014410pabpc49985.220ENSAPLG00000009729-9985.191Anas_platyrhynchos
ENSOMEG00000014410pabpc49884.248ENSACAG00000002544PABPC49984.050Anolis_carolinensis
ENSOMEG00000014410pabpc49983.491ENSANAG00000025079PABPC49983.043Aotus_nancymaae
ENSOMEG00000014410pabpc410095.701ENSACLG00000019558pabpc49995.955Astatotilapia_calliptera
ENSOMEG00000014410pabpc49984.810ENSAMXG00000018779pabpc49885.370Astyanax_mexicanus
ENSOMEG00000014410pabpc46084.431ENSBTAG00000048536-9384.431Bos_taurus
ENSOMEG00000014410pabpc49983.468ENSBTAG00000017125PABPC49981.550Bos_taurus
ENSOMEG00000014410pabpc49983.491ENSCJAG00000002512-9983.043Callithrix_jacchus
ENSOMEG00000014410pabpc47385.714ENSCJAG00000045953-8579.018Callithrix_jacchus
ENSOMEG00000014410pabpc49983.648ENSCAFG00000003081PABPC49983.201Canis_familiaris
ENSOMEG00000014410pabpc49983.468ENSCAFG00020004161PABPC49979.848Canis_lupus_dingo
ENSOMEG00000014410pabpc49965.683ENSCHIG00000023385-9965.463Capra_hircus
ENSOMEG00000014410pabpc49983.266ENSCHIG00000019398-9979.697Capra_hircus
ENSOMEG00000014410pabpc49983.648ENSTSYG00000006532PABPC49983.201Carlito_syrichta
ENSOMEG00000014410pabpc49983.570ENSCAPG00000015984PABPC49982.962Cavia_aperea
ENSOMEG00000014410pabpc49983.669ENSCPOG00000009552PABPC49983.201Cavia_porcellus
ENSOMEG00000014410pabpc49983.491ENSCCAG00000037306PABPC49983.043Cebus_capucinus
ENSOMEG00000014410pabpc49983.648ENSCATG00000042164PABPC49983.201Cercocebus_atys
ENSOMEG00000014410pabpc49983.542ENSCLAG00000011899PABPC49983.043Chinchilla_lanigera
ENSOMEG00000014410pabpc49983.468ENSCSAG00000001135PABPC49979.848Chlorocebus_sabaeus
ENSOMEG00000014410pabpc48988.684ENSCHOG00000005327PABPC47989.757Choloepus_hoffmanni
ENSOMEG00000014410pabpc49986.006ENSCPBG00000001038PABPC49985.987Chrysemys_picta_bellii
ENSOMEG00000014410pabpc49883.892ENSCANG00000034177PABPC49983.441Colobus_angolensis_palliatus
ENSOMEG00000014410pabpc49885.366ENSCGRG00001018166Pabpc49884.740Cricetulus_griseus_chok1gshd
ENSOMEG00000014410pabpc49785.644ENSCGRG00000009777Pabpc49885.008Cricetulus_griseus_crigri
ENSOMEG00000014410pabpc410094.745ENSCSEG00000000130pabpc49995.146Cynoglossus_semilaevis
ENSOMEG00000014410pabpc49895.942ENSCVAG00000019246pabpc49996.552Cyprinodon_variegatus
ENSOMEG00000014410pabpc49891.853ENSDARG00000059259pabpc410091.570Danio_rerio
ENSOMEG00000014410pabpc49882.042ENSDNOG00000018444-9982.143Dasypus_novemcinctus
ENSOMEG00000014410pabpc49983.468ENSDORG00000011581Pabpc49981.860Dipodomys_ordii
ENSOMEG00000014410pabpc48554.479ENSETEG00000009172-9953.394Echinops_telfairi
ENSOMEG00000014410pabpc49990.625ENSETEG00000018453-8490.625Echinops_telfairi
ENSOMEG00000014410pabpc49877.266ENSEBUG00000000992pabpc48989.189Eptatretus_burgeri
ENSOMEG00000014410pabpc49676.748ENSEBUG00000013782pabpc49976.274Eptatretus_burgeri
ENSOMEG00000014410pabpc49983.468ENSEASG00005014119PABPC49979.848Equus_asinus_asinus
ENSOMEG00000014410pabpc49983.468ENSECAG00000009396PABPC49979.848Equus_caballus
ENSOMEG00000014410pabpc49781.905ENSEEUG00000002962PABPC49977.879Erinaceus_europaeus
ENSOMEG00000014410pabpc49892.026ENSELUG00000003195pabpc49991.587Esox_lucius
ENSOMEG00000014410pabpc49983.648ENSFCAG00000015254-9983.201Felis_catus
ENSOMEG00000014410pabpc49984.977ENSFALG00000000543PABPC49985.805Ficedula_albicollis
ENSOMEG00000014410pabpc49983.468ENSFDAG00000020016-9980.000Fukomys_damarensis
ENSOMEG00000014410pabpc48952.321ENSFDAG00000010581-9950.432Fukomys_damarensis
ENSOMEG00000014410pabpc49996.006ENSFHEG00000007548pabpc49996.764Fundulus_heteroclitus
ENSOMEG00000014410pabpc410089.984ENSGMOG00000019025pabpc49990.461Gadus_morhua
ENSOMEG00000014410pabpc49986.006ENSGALG00000003800PABPC49985.987Gallus_gallus
ENSOMEG00000014410pabpc49997.847ENSGAFG00000018195pabpc49898.889Gambusia_affinis
ENSOMEG00000014410pabpc410094.268ENSGACG00000007179pabpc49994.498Gasterosteus_aculeatus
ENSOMEG00000014410pabpc49986.164ENSGAGG00000001888PABPC49986.146Gopherus_agassizii
ENSOMEG00000014410pabpc49983.491ENSGGOG00000004002PABPC49983.043Gorilla_gorilla
ENSOMEG00000014410pabpc410095.541ENSHBUG00000020206pabpc49995.793Haplochromis_burtoni
ENSOMEG00000014410pabpc49983.468ENSHGLG00000011162PABPC49983.043Heterocephalus_glaber_female
ENSOMEG00000014410pabpc49983.468ENSHGLG00100001580PABPC49983.043Heterocephalus_glaber_male
ENSOMEG00000014410pabpc410093.153ENSHCOG00000012694pabpc49994.660Hippocampus_comes
ENSOMEG00000014410pabpc49790.968ENSIPUG00000016620pabpc49891.026Ictalurus_punctatus
ENSOMEG00000014410pabpc49985.096ENSSTOG00000010416PABPC49984.653Ictidomys_tridecemlineatus
ENSOMEG00000014410pabpc49981.202ENSJJAG00000007781Pabpc49980.280Jaculus_jaculus
ENSOMEG00000014410pabpc49994.737ENSKMAG00000013597pabpc410094.737Kryptolebias_marmoratus
ENSOMEG00000014410pabpc410094.444ENSLBEG00000013654pabpc49895.000Labrus_bergylta
ENSOMEG00000014410pabpc49985.714ENSLACG00000011907PABPC49985.851Latimeria_chalumnae
ENSOMEG00000014410pabpc49989.449ENSLOCG00000001877pabpc49990.271Lepisosteus_oculatus
ENSOMEG00000014410pabpc49985.256ENSLAFG00000000151PABPC49984.814Loxodonta_africana
ENSOMEG00000014410pabpc49983.648ENSMFAG00000041481PABPC49983.201Macaca_fascicularis
ENSOMEG00000014410pabpc49983.468ENSMMUG00000007497PABPC49979.848Macaca_mulatta
ENSOMEG00000014410pabpc49983.491ENSMNEG00000043054PABPC49983.043Macaca_nemestrina
ENSOMEG00000014410pabpc49983.648ENSMLEG00000040716PABPC49983.201Mandrillus_leucophaeus
ENSOMEG00000014410pabpc49895.955ENSMAMG00000010025pabpc49995.955Mastacembelus_armatus
ENSOMEG00000014410pabpc410095.541ENSMZEG00005006141pabpc49995.793Maylandia_zebra
ENSOMEG00000014410pabpc49882.968ENSMGAG00000005408PABPC49982.594Meleagris_gallopavo
ENSOMEG00000014410pabpc46080.117ENSMAUG00000004089-9280.117Mesocricetus_auratus
ENSOMEG00000014410pabpc48088.889ENSMAUG00000019763-8289.691Mesocricetus_auratus
ENSOMEG00000014410pabpc47280.000ENSMAUG00000001295-9779.048Mesocricetus_auratus
ENSOMEG00000014410pabpc49875.180ENSMICG00000036729-9974.047Microcebus_murinus
ENSOMEG00000014410pabpc48884.685ENSMICG00000016633-10084.505Microcebus_murinus
ENSOMEG00000014410pabpc49884.142ENSMOCG00000006763Pabpc49883.604Microtus_ochrogaster
ENSOMEG00000014410pabpc410091.879ENSMMOG00000002363pabpc49991.909Mola_mola
ENSOMEG00000014410pabpc49782.589ENSMODG00000017657-9981.985Monodelphis_domestica
ENSOMEG00000014410pabpc46271.467ENSMODG00000018051-9671.467Monodelphis_domestica
ENSOMEG00000014410pabpc49895.806ENSMALG00000011017pabpc49995.806Monopterus_albus
ENSOMEG00000014410pabpc48785.387MGP_CAROLIEiJ_G0024864-9974.234Mus_caroli
ENSOMEG00000014410pabpc49982.863MGP_CAROLIEiJ_G0026435-10096.454Mus_caroli
ENSOMEG00000014410pabpc49984.936ENSMUSG00000011257Pabpc410094.643Mus_musculus
ENSOMEG00000014410pabpc49983.573MGP_PahariEiJ_G0028765Pabpc410097.163Mus_pahari
ENSOMEG00000014410pabpc49879.661MGP_SPRETEiJ_G0027415Pabpc410097.163Mus_spretus
ENSOMEG00000014410pabpc49983.468ENSMPUG00000014414-9979.848Mustela_putorius_furo
ENSOMEG00000014410pabpc49446.205ENSMPUG00000006836-10045.710Mustela_putorius_furo
ENSOMEG00000014410pabpc49984.776ENSMLUG00000012068PABPC49984.740Myotis_lucifugus
ENSOMEG00000014410pabpc49985.256ENSNGAG00000018292Pabpc49984.814Nannospalax_galili
ENSOMEG00000014410pabpc46597.590ENSNBRG00000010047-7297.590Neolamprologus_brichardi
ENSOMEG00000014410pabpc46297.596ENSNBRG00000009708pabpc49897.596Neolamprologus_brichardi
ENSOMEG00000014410pabpc49983.648ENSNLEG00000011928PABPC49983.201Nomascus_leucogenys
ENSOMEG00000014410pabpc49393.651ENSOPRG00000011984PABPC48693.651Ochotona_princeps
ENSOMEG00000014410pabpc45582.857ENSODEG00000013457-10082.857Octodon_degus
ENSOMEG00000014410pabpc49881.579ENSODEG00000017434-9972.881Octodon_degus
ENSOMEG00000014410pabpc49983.266ENSODEG00000006592-9982.567Octodon_degus
ENSOMEG00000014410pabpc410095.541ENSONIG00000008176pabpc49995.793Oreochromis_niloticus
ENSOMEG00000014410pabpc49985.063ENSOANG00000010001PABPC49985.032Ornithorhynchus_anatinus
ENSOMEG00000014410pabpc49583.333ENSOCUG00000000562PABPC48880.063Oryctolagus_cuniculus
ENSOMEG00000014410pabpc49999.383ENSORLG00000017479pabpc49899.383Oryzias_latipes
ENSOMEG00000014410pabpc410098.408ENSORLG00020018644pabpc49998.408Oryzias_latipes_hni
ENSOMEG00000014410pabpc49999.383ENSORLG00015015042pabpc49899.383Oryzias_latipes_hsok
ENSOMEG00000014410pabpc49983.468ENSOGAG00000004067PABPC49981.327Otolemur_garnettii
ENSOMEG00000014410pabpc49983.266ENSOARG00000020060PABPC49979.697Ovis_aries
ENSOMEG00000014410pabpc49983.491ENSPPAG00000043625PABPC49983.043Pan_paniscus
ENSOMEG00000014410pabpc49983.648ENSPPRG00000024727PABPC49983.201Panthera_pardus
ENSOMEG00000014410pabpc49983.648ENSPTIG00000005829PABPC49983.201Panthera_tigris_altaica
ENSOMEG00000014410pabpc49983.491ENSPTRG00000000573PABPC49983.043Pan_troglodytes
ENSOMEG00000014410pabpc49983.648ENSPANG00000009484PABPC49983.201Papio_anubis
ENSOMEG00000014410pabpc49989.449ENSPKIG00000025356pabpc49989.508Paramormyrops_kingsleyae
ENSOMEG00000014410pabpc49986.321ENSPSIG00000016892PABPC49986.306Pelodiscus_sinensis
ENSOMEG00000014410pabpc49990.112ENSPMGG00000009073pabpc49990.291Periophthalmus_magnuspinnatus
ENSOMEG00000014410pabpc410080.216ENSPEMG00000024193-9980.696Peromyscus_maniculatus_bairdii
ENSOMEG00000014410pabpc410083.065ENSPEMG00000023569-9983.280Peromyscus_maniculatus_bairdii
ENSOMEG00000014410pabpc48874.390ENSPMAG00000002836pabpc410075.261Petromyzon_marinus
ENSOMEG00000014410pabpc49574.790ENSPMAG00000007885pabpc49973.006Petromyzon_marinus
ENSOMEG00000014410pabpc49194.299ENSPCIG00000020674PABPC49994.903Phascolarctos_cinereus
ENSOMEG00000014410pabpc49995.048ENSPFOG00000002682pabpc49995.793Poecilia_formosa
ENSOMEG00000014410pabpc49995.208ENSPLAG00000010112pabpc49995.955Poecilia_latipinna
ENSOMEG00000014410pabpc49896.098ENSPMEG00000019739pabpc49995.793Poecilia_mexicana
ENSOMEG00000014410pabpc49995.527ENSPREG00000001589pabpc49996.117Poecilia_reticulata
ENSOMEG00000014410pabpc49983.266ENSPPYG00000001506PABPC49979.697Pongo_abelii
ENSOMEG00000014410pabpc49979.661ENSPCAG00000003341PABPC49974.545Procavia_capensis
ENSOMEG00000014410pabpc49983.468ENSPCOG00000023725-9983.070Propithecus_coquereli
ENSOMEG00000014410pabpc49969.213ENSPCOG00000025882-9582.292Propithecus_coquereli
ENSOMEG00000014410pabpc49882.367ENSPVAG00000002187PABPC49978.655Pteropus_vampyrus
ENSOMEG00000014410pabpc410095.701ENSPNYG00000006134pabpc49995.955Pundamilia_nyererei
ENSOMEG00000014410pabpc49991.930ENSPNAG00000024355pabpc49992.605Pygocentrus_nattereri
ENSOMEG00000014410pabpc49983.266ENSRNOG00000015642Pabpc49981.931Rattus_norvegicus
ENSOMEG00000014410pabpc49981.416ENSRNOG00000028592AABR07035074.19979.627Rattus_norvegicus
ENSOMEG00000014410pabpc49983.648ENSRBIG00000039761PABPC49983.201Rhinopithecus_bieti
ENSOMEG00000014410pabpc49983.648ENSRROG00000033355PABPC49983.201Rhinopithecus_roxellana
ENSOMEG00000014410pabpc49983.491ENSSBOG00000026193PABPC49983.043Saimiri_boliviensis_boliviensis
ENSOMEG00000014410pabpc49786.356ENSSHAG00000018139PABPC49985.692Sarcophilus_harrisii
ENSOMEG00000014410pabpc49989.052ENSSFOG00015023514pabpc49989.718Scleropages_formosus
ENSOMEG00000014410pabpc49995.056ENSSMAG00000009007pabpc49995.793Scophthalmus_maximus
ENSOMEG00000014410pabpc49895.793ENSSDUG00000012683pabpc49995.793Seriola_dumerili
ENSOMEG00000014410pabpc49895.793ENSSLDG00000013025pabpc49995.793Seriola_lalandi_dorsalis
ENSOMEG00000014410pabpc49978.814ENSSARG00000000310PABPC49972.879Sorex_araneus
ENSOMEG00000014410pabpc49986.825ENSSPUG00000003204PABPC49986.817Sphenodon_punctatus
ENSOMEG00000014410pabpc49896.278ENSSPAG00000009252pabpc49996.278Stegastes_partitus
ENSOMEG00000014410pabpc49983.468ENSSSCG00000003660-9983.201Sus_scrofa
ENSOMEG00000014410pabpc48944.912ENSSSCG00000036170-9545.198Sus_scrofa
ENSOMEG00000014410pabpc49981.832ENSTGUG00000001266PABPC49982.219Taeniopygia_guttata
ENSOMEG00000014410pabpc49993.301ENSTRUG00000005907pabpc49994.013Takifugu_rubripes
ENSOMEG00000014410pabpc49986.284ENSTNIG00000016902pabpc49986.731Tetraodon_nigroviridis
ENSOMEG00000014410pabpc49879.661ENSTBEG00000009035PABPC49968.908Tupaia_belangeri
ENSOMEG00000014410pabpc49879.661ENSTTRG00000014340PABPC49967.899Tursiops_truncatus
ENSOMEG00000014410pabpc49983.648ENSUAMG00000000303PABPC49983.201Ursus_americanus
ENSOMEG00000014410pabpc49989.342ENSUMAG00000019585PABPC49990.115Ursus_maritimus
ENSOMEG00000014410pabpc47770.206ENSVPAG00000010041PABPC47370.206Vicugna_pacos
ENSOMEG00000014410pabpc49983.648ENSVVUG00000005215PABPC49983.201Vulpes_vulpes
ENSOMEG00000014410pabpc46796.429ENSXETG00000027221-10096.429Xenopus_tropicalis
ENSOMEG00000014410pabpc49981.604ENSXETG00000010946pabpc49981.240Xenopus_tropicalis
ENSOMEG00000014410pabpc49997.361ENSXCOG00000013190pabpc49696.226Xiphophorus_couchianus
ENSOMEG00000014410pabpc49995.527ENSXMAG00000019007pabpc49996.117Xiphophorus_maculatus

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