EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000014466 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 2095 bases
Position: chrNVQA01004708.1:22155-24249
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000012991	zf-CCHC	PF00098.23	1.1e-14	1	2
ENSOMEP00000012991	zf-CCHC	PF00098.23	1.1e-14	2	2
ENSOMEP00000030271	zf-CCHC	PF00098.23	3e-12	1	2
ENSOMEP00000030271	zf-CCHC	PF00098.23	3e-12	2	2
ENSOMEP00000012988	zf-CCHC	PF00098.23	5.1e-12	1	2
ENSOMEP00000012988	zf-CCHC	PF00098.23	5.1e-12	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000032954	-	441	-	ENSOMEP00000012991	146 (aa)	-	-
ENSOMET00000032950	-	507	-	ENSOMEP00000030271	168 (aa)	-	-
ENSOMET00000020502	-	555	-	ENSOMEP00000012988	184 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000014466's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000014466's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000014466	-	63	53.261	ENSOMEG00000009474	-	71	54.455

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000014466	-	51	33.962	ENSACIG00000007037	-	79	33.962	Amphilophus_citrinellus
ENSOMEG00000014466	-	52	70.115	ENSLBEG00000003575	-	58	70.115	Labrus_bergylta
ENSOMEG00000014466	-	51	59.770	ENSMGAG00000016983	-	68	59.770	Meleagris_gallopavo
ENSOMEG00000014466	-	57	62.037	ENSMALG00000007358	-	83	62.037	Monopterus_albus
ENSOMEG00000014466	-	54	34.568	ENSPREG00000016964	-	75	35.849	Poecilia_reticulata
ENSOMEG00000014466	-	52	35.789	ENSXCOG00000002061	-	66	35.789	Xiphophorus_couchianus