EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOMEG00000014482 (Gene tree)
Gene ID: 112142648
Gene Symbol: scaf4a
Alias: -
Full Name: SR-related CTD associated factor 4
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 13332 bases
Position: chrNVQA01000005.1:14000467-14013798
Accession: 112142648
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000013030	RRM_1	PF00076.22	1.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000020566	-	5913	XM_024266157	ENSOMEP00000013030	1163 (aa)	XP_024121925	UPI000CF7B7EF

Gene Model

Click here to download ENSOMEG00000014482's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000014482's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000014482	scaf4a	98	79.088	ENSAPOG00000002946	scaf4a	99	73.751	Acanthochromis_polyacanthus
ENSOMEG00000014482	scaf4a	98	81.074	ENSAOCG00000000615	scaf4a	99	74.027	Amphiprion_ocellaris
ENSOMEG00000014482	scaf4a	98	80.940	ENSAPEG00000021229	scaf4a	99	74.068	Amphiprion_percula
ENSOMEG00000014482	scaf4a	56	59.471	ENSAPLG00000002509	SCAF4	71	54.937	Anas_platyrhynchos
ENSOMEG00000014482	scaf4a	88	55.283	ENSAMXG00000008585	scaf4a	87	64.256	Astyanax_mexicanus
ENSOMEG00000014482	scaf4a	99	64.770	ENSCSEG00000019549	scaf4a	99	64.184	Cynoglossus_semilaevis
ENSOMEG00000014482	scaf4a	66	58.831	ENSDARG00000077093	scaf4a	69	59.085	Danio_rerio
ENSOMEG00000014482	scaf4a	65	73.913	ENSFHEG00000017866	scaf4a	63	75.550	Fundulus_heteroclitus
ENSOMEG00000014482	scaf4a	56	59.610	ENSGALG00000033965	SCAF4	70	55.190	Gallus_gallus
ENSOMEG00000014482	scaf4a	63	77.868	ENSGAFG00000019460	scaf4a	85	76.953	Gambusia_affinis
ENSOMEG00000014482	scaf4a	75	65.680	ENSGACG00000020580	scaf4a	86	63.086	Gasterosteus_aculeatus
ENSOMEG00000014482	scaf4a	99	71.453	ENSHBUG00000007920	scaf4a	99	71.851	Haplochromis_burtoni
ENSOMEG00000014482	scaf4a	54	89.706	ENSHCOG00000006849	scaf4a	80	89.706	Hippocampus_comes
ENSOMEG00000014482	scaf4a	90	56.429	ENSIPUG00000011285	scaf4	100	73.077	Ictalurus_punctatus
ENSOMEG00000014482	scaf4a	98	65.717	ENSLBEG00000014675	scaf4a	99	68.135	Labrus_bergylta
ENSOMEG00000014482	scaf4a	53	47.749	ENSLOCG00000009162	scaf4a	65	62.050	Lepisosteus_oculatus
ENSOMEG00000014482	scaf4a	74	70.975	ENSMAMG00000013223	scaf4a	99	69.629	Mastacembelus_armatus
ENSOMEG00000014482	scaf4a	99	71.283	ENSMZEG00005024349	scaf4a	99	70.268	Maylandia_zebra
ENSOMEG00000014482	scaf4a	56	58.333	ENSMGAG00000014515	SCAF4	70	54.673	Meleagris_gallopavo
ENSOMEG00000014482	scaf4a	76	78.070	ENSMALG00000013825	scaf4a	91	77.778	Monopterus_albus
ENSOMEG00000014482	scaf4a	99	70.740	ENSONIG00000004687	scaf4a	99	71.176	Oreochromis_niloticus
ENSOMEG00000014482	scaf4a	99	90.878	ENSORLG00000004384	scaf4a	99	90.878	Oryzias_latipes
ENSOMEG00000014482	scaf4a	99	89.243	ENSORLG00020011857	scaf4a	99	90.275	Oryzias_latipes_hni
ENSOMEG00000014482	scaf4a	99	88.937	ENSORLG00015017880	scaf4a	99	88.851	Oryzias_latipes_hsok
ENSOMEG00000014482	scaf4a	58	63.821	ENSPKIG00000022408	scaf4a	99	63.847	Paramormyrops_kingsleyae
ENSOMEG00000014482	scaf4a	85	77.655	ENSPFOG00000017156	scaf4a	100	66.092	Poecilia_formosa
ENSOMEG00000014482	scaf4a	66	77.378	ENSPLAG00000001972	scaf4a	94	77.995	Poecilia_latipinna
ENSOMEG00000014482	scaf4a	54	56.989	ENSPMEG00000006666	-	59	55.556	Poecilia_mexicana
ENSOMEG00000014482	scaf4a	74	58.151	ENSPNAG00000016892	scaf4a	99	60.422	Pygocentrus_nattereri
ENSOMEG00000014482	scaf4a	87	45.096	ENSSFOG00015006338	scaf4a	67	53.111	Scleropages_formosus
ENSOMEG00000014482	scaf4a	64	75.564	ENSSMAG00000017901	scaf4a	99	67.628	Scophthalmus_maximus
ENSOMEG00000014482	scaf4a	64	80.637	ENSSDUG00000012918	scaf4a	99	71.933	Seriola_dumerili
ENSOMEG00000014482	scaf4a	64	80.319	ENSSLDG00000021671	scaf4a	99	71.597	Seriola_lalandi_dorsalis
ENSOMEG00000014482	scaf4a	77	65.637	ENSXETG00000007351	scaf4	55	64.557	Xenopus_tropicalis