EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSOMEG00000014677 (Gene tree)
Gene ID
112146885
Gene Symbol
rbfox3b
Alias
-
Full Name
RNA binding fox-1 homolog 3b
Gene Type
protein_coding
Species
Oryzias_melastigma
Status
putative
Strand
Plus strand
Length
251221 bases
Position
chrNVQA01000010.1:23050475-23301695
Accession
ZDB-GENE-091204-46
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSOMEP00000013209Fox-1_CPF12414.82.1e-2011
ENSOMEP00000030432Fox-1_CPF12414.82.4e-2011
ENSOMEP00000030398Fox-1_CPF12414.83.6e-2011
ENSOMEP00000030432RRM_1PF00076.221.8e-1811
ENSOMEP00000030398RRM_1PF00076.221.9e-1811
ENSOMEP00000013209RRM_1PF00076.220.0001211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSOMET00000020751-5748-ENSOMEP00000030398379 (aa)--
ENSOMET00000020784-5479-ENSOMEP00000013209278 (aa)--
ENSOMET00000020816-5448-ENSOMEP00000030432381 (aa)--
Gene Model
Click here to download ENSOMEG00000014677's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000014677's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSOMEG00000014677rbfox3b5853.953ENSOMEG00000007909-5652.041
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSOMEG00000014677rbfox3b7676.995ENSG00000167281RBFOX39676.000Homo_sapiens
ENSOMEG00000014677rbfox3b8692.705ENSAPOG00000021630rbfox3b8592.049Acanthochromis_polyacanthus
ENSOMEG00000014677rbfox3b8567.077ENSAPOG00000015658-7466.559Acanthochromis_polyacanthus
ENSOMEG00000014677rbfox3b7671.429ENSAMEG00000014170RBFOX36971.528Ailuropoda_melanoleuca
ENSOMEG00000014677rbfox3b8085.827ENSACIG00000010817rbfox3b8491.882Amphilophus_citrinellus
ENSOMEG00000014677rbfox3b7472.054ENSACIG00000003768-7471.831Amphilophus_citrinellus
ENSOMEG00000014677rbfox3b8692.705ENSAOCG00000012358rbfox3b8592.705Amphiprion_ocellaris
ENSOMEG00000014677rbfox3b8578.086ENSAOCG00000010786-8378.233Amphiprion_ocellaris
ENSOMEG00000014677rbfox3b8490.221ENSAPEG00000019081rbfox3b8592.233Amphiprion_percula
ENSOMEG00000014677rbfox3b7870.662ENSAPEG00000015891-7370.297Amphiprion_percula
ENSOMEG00000014677rbfox3b8167.886ENSATEG00000023101-7475.194Anabas_testudineus
ENSOMEG00000014677rbfox3b8682.963ENSATEG00000019945rbfox3b7092.248Anabas_testudineus
ENSOMEG00000014677rbfox3b8473.832ENSACAG00000016093RBFOX37976.159Anolis_carolinensis
ENSOMEG00000014677rbfox3b7676.526ENSANAG00000023457RBFOX37775.581Aotus_nancymaae
ENSOMEG00000014677rbfox3b8676.147ENSACLG00000025552-8077.419Astatotilapia_calliptera
ENSOMEG00000014677rbfox3b8692.401ENSACLG00000020011rbfox3b8292.401Astatotilapia_calliptera
ENSOMEG00000014677rbfox3b8380.635ENSAMXG00000042841rbfox3b8080.936Astyanax_mexicanus
ENSOMEG00000014677rbfox3b8679.464ENSAMXG00000037246rbfox3a8079.299Astyanax_mexicanus
ENSOMEG00000014677rbfox3b7676.995ENSBTAG00000006280RBFOX36378.199Bos_taurus
ENSOMEG00000014677rbfox3b7676.526ENSCJAG00000009563RBFOX37475.581Callithrix_jacchus
ENSOMEG00000014677rbfox3b5570.811ENSCAFG00000005547RBFOX35987.500Canis_familiaris
ENSOMEG00000014677rbfox3b7676.995ENSCAFG00020008126RBFOX36475.969Canis_lupus_dingo
ENSOMEG00000014677rbfox3b7676.526ENSCHIG00000009124RBFOX36475.581Capra_hircus
ENSOMEG00000014677rbfox3b7677.465ENSTSYG00000029617RBFOX36675.969Carlito_syrichta
ENSOMEG00000014677rbfox3b7676.995ENSCPOG00000021703RBFOX36675.969Cavia_porcellus
ENSOMEG00000014677rbfox3b7676.526ENSCCAG00000028450RBFOX37775.581Cebus_capucinus
ENSOMEG00000014677rbfox3b7676.995ENSCATG00000018349RBFOX37775.969Cercocebus_atys
ENSOMEG00000014677rbfox3b7676.995ENSCLAG00000006449RBFOX36675.969Chinchilla_lanigera
ENSOMEG00000014677rbfox3b7667.623ENSCSAG00000002355RBFOX37775.969Chlorocebus_sabaeus
ENSOMEG00000014677rbfox3b7577.895ENSCPBG00000010904RBFOX37778.210Chrysemys_picta_bellii
ENSOMEG00000014677rbfox3b7676.995ENSCANG00000043120RBFOX37775.969Colobus_angolensis_palliatus
ENSOMEG00000014677rbfox3b7677.358ENSCGRG00001019476Rbfox36675.969Cricetulus_griseus_chok1gshd
ENSOMEG00000014677rbfox3b7677.358ENSCGRG00000003268Rbfox36675.969Cricetulus_griseus_crigri
ENSOMEG00000014677rbfox3b8578.395ENSCSEG00000015567RBFOX38178.387Cynoglossus_semilaevis
ENSOMEG00000014677rbfox3b8673.636ENSCSEG00000020606RBFOX38275.080Cynoglossus_semilaevis
ENSOMEG00000014677rbfox3b8692.705ENSCVAG00000006882rbfox3b8592.705Cyprinodon_variegatus
ENSOMEG00000014677rbfox3b8679.697ENSDARG00000010083rbfox3a8080.192Danio_rerio
ENSOMEG00000014677rbfox3b9173.930ENSDARG00000074310rbfox3b9770.852Danio_rerio
ENSOMEG00000014677rbfox3b5178.462ENSDNOG00000039391RBFOX36464.552Dasypus_novemcinctus
ENSOMEG00000014677rbfox3b7662.264ENSDORG00000005352Rbfox36366.279Dipodomys_ordii
ENSOMEG00000014677rbfox3b8151.613ENSEBUG00000013559RBFOX37451.064Eptatretus_burgeri
ENSOMEG00000014677rbfox3b8161.240ENSEBUG00000002129RBFOX37467.037Eptatretus_burgeri
ENSOMEG00000014677rbfox3b7667.623ENSEASG00005005059RBFOX37676.357Equus_asinus_asinus
ENSOMEG00000014677rbfox3b7667.213ENSECAG00000023811RBFOX37675.969Equus_caballus
ENSOMEG00000014677rbfox3b5570.142ENSEEUG00000013974RBFOX35671.681Erinaceus_europaeus
ENSOMEG00000014677rbfox3b8689.362ENSELUG00000017963rbfox3b8189.776Esox_lucius
ENSOMEG00000014677rbfox3b5558.685ENSELUG00000009807-6154.018Esox_lucius
ENSOMEG00000014677rbfox3b8475.938ENSFCAG00000002555RBFOX37976.238Felis_catus
ENSOMEG00000014677rbfox3b6474.486ENSFALG00000012288RBFOX35575.309Ficedula_albicollis
ENSOMEG00000014677rbfox3b7668.075ENSFDAG00000007489RBFOX36468.605Fukomys_damarensis
ENSOMEG00000014677rbfox3b8197.345ENSFHEG00000008550rbfox3b8097.345Fundulus_heteroclitus
ENSOMEG00000014677rbfox3b8063.241ENSGMOG00000019304-6067.829Gadus_morhua
ENSOMEG00000014677rbfox3b8477.987ENSGALG00000032889RBFOX37978.405Gallus_gallus
ENSOMEG00000014677rbfox3b8589.198ENSGAFG00000005025rbfox3b8389.389Gambusia_affinis
ENSOMEG00000014677rbfox3b7468.750ENSGACG00000002138-6475.875Gasterosteus_aculeatus
ENSOMEG00000014677rbfox3b8477.987ENSGAGG00000020025RBFOX37777.821Gopherus_agassizii
ENSOMEG00000014677rbfox3b7676.995ENSGGOG00000012546RBFOX37775.969Gorilla_gorilla
ENSOMEG00000014677rbfox3b8692.401ENSHBUG00000018099rbfox3b8592.401Haplochromis_burtoni
ENSOMEG00000014677rbfox3b7775.342ENSHBUG00000023098-9961.721Haplochromis_burtoni
ENSOMEG00000014677rbfox3b7676.056ENSHGLG00000008679RBFOX36675.194Heterocephalus_glaber_female
ENSOMEG00000014677rbfox3b7671.963ENSHGLG00100014739RBFOX38071.815Heterocephalus_glaber_male
ENSOMEG00000014677rbfox3b7669.421ENSHCOG00000001863RBFOX37676.744Hippocampus_comes
ENSOMEG00000014677rbfox3b8478.261ENSHCOG00000007444RBFOX37479.479Hippocampus_comes
ENSOMEG00000014677rbfox3b8072.727ENSIPUG00000021966rbfox3b9378.810Ictalurus_punctatus
ENSOMEG00000014677rbfox3b8678.274ENSIPUG00000012010rbfox3a8080.130Ictalurus_punctatus
ENSOMEG00000014677rbfox3b5370.946ENSSTOG00000026817RBFOX36571.090Ictidomys_tridecemlineatus
ENSOMEG00000014677rbfox3b7676.526ENSJJAG00000014167Rbfox36775.581Jaculus_jaculus
ENSOMEG00000014677rbfox3b8692.705ENSKMAG00000006726rbfox3b8592.705Kryptolebias_marmoratus
ENSOMEG00000014677rbfox3b8692.049ENSLBEG00000004030rbfox3b8592.049Labrus_bergylta
ENSOMEG00000014677rbfox3b8679.205ENSLBEG00000022508-8079.355Labrus_bergylta
ENSOMEG00000014677rbfox3b5357.921ENSLACG00000000021-9559.901Latimeria_chalumnae
ENSOMEG00000014677rbfox3b7470.550ENSLACG00000018409-7169.932Latimeria_chalumnae
ENSOMEG00000014677rbfox3b7584.211ENSLOCG00000012267rbfox3a7684.701Lepisosteus_oculatus
ENSOMEG00000014677rbfox3b7668.454ENSLAFG00000016623RBFOX36476.357Loxodonta_africana
ENSOMEG00000014677rbfox3b7676.995ENSMFAG00000002247RBFOX36775.969Macaca_fascicularis
ENSOMEG00000014677rbfox3b7676.995ENSMMUG00000023028RBFOX38375.100Macaca_mulatta
ENSOMEG00000014677rbfox3b7676.995ENSMNEG00000041147RBFOX37775.969Macaca_nemestrina
ENSOMEG00000014677rbfox3b7676.995ENSMLEG00000025686RBFOX37775.969Mandrillus_leucophaeus
ENSOMEG00000014677rbfox3b7477.580ENSMAMG00000020600-7377.323Mastacembelus_armatus
ENSOMEG00000014677rbfox3b8078.346ENSMAMG00000019810rbfox3b7984.496Mastacembelus_armatus
ENSOMEG00000014677rbfox3b8692.401ENSMZEG00005000781rbfox3b8591.743Maylandia_zebra
ENSOMEG00000014677rbfox3b7264.026ENSMZEG00005003055-5389.344Maylandia_zebra
ENSOMEG00000014677rbfox3b6374.684ENSMGAG00000005600RBFOX38375.424Meleagris_gallopavo
ENSOMEG00000014677rbfox3b7676.887ENSMAUG00000013543Rbfox36675.581Mesocricetus_auratus
ENSOMEG00000014677rbfox3b8177.193ENSMICG00000014898RBFOX37775.194Microcebus_murinus
ENSOMEG00000014677rbfox3b7675.943ENSMOCG00000015373Rbfox36674.806Microtus_ochrogaster
ENSOMEG00000014677rbfox3b8691.743ENSMMOG00000020193rbfox3b8491.718Mola_mola
ENSOMEG00000014677rbfox3b8475.862ENSMODG00000002089RBFOX37976.159Monodelphis_domestica
ENSOMEG00000014677rbfox3b8677.982ENSMALG00000018270-8078.065Monopterus_albus
ENSOMEG00000014677rbfox3b8689.602ENSMALG00000020407rbfox3b8191.374Monopterus_albus
ENSOMEG00000014677rbfox3b7676.415MGP_CAROLIEiJ_G0017487Rbfox38491.803Mus_caroli
ENSOMEG00000014677rbfox3b7676.056ENSMUSG00000025576Rbfox38491.803Mus_musculus
ENSOMEG00000014677rbfox3b7676.887MGP_PahariEiJ_G0018614Rbfox38492.623Mus_pahari
ENSOMEG00000014677rbfox3b7676.415MGP_SPRETEiJ_G0018331Rbfox38491.803Mus_spretus
ENSOMEG00000014677rbfox3b7667.077ENSMPUG00000012319RBFOX37666.452Mustela_putorius_furo
ENSOMEG00000014677rbfox3b7677.465ENSNGAG00000018006Rbfox36676.357Nannospalax_galili
ENSOMEG00000014677rbfox3b7574.913ENSNBRG00000022885-7574.545Neolamprologus_brichardi
ENSOMEG00000014677rbfox3b8592.593ENSNBRG00000010102rbfox3b8692.880Neolamprologus_brichardi
ENSOMEG00000014677rbfox3b5568.421ENSNLEG00000000153-7266.210Nomascus_leucogenys
ENSOMEG00000014677rbfox3b5177.941ENSMEUG00000004218-6654.864Notamacropus_eugenii
ENSOMEG00000014677rbfox3b5569.856ENSOPRG00000016279-5470.192Ochotona_princeps
ENSOMEG00000014677rbfox3b7676.995ENSODEG00000009433RBFOX37675.969Octodon_degus
ENSOMEG00000014677rbfox3b8693.009ENSONIG00000009549rbfox3b8593.009Oreochromis_niloticus
ENSOMEG00000014677rbfox3b7774.237ENSONIG00000007282-7774.823Oreochromis_niloticus
ENSOMEG00000014677rbfox3b8699.083ENSORLG00000000905rbfox3b6799.083Oryzias_latipes
ENSOMEG00000014677rbfox3b8699.088ENSORLG00020018030rbfox3b8699.088Oryzias_latipes_hni
ENSOMEG00000014677rbfox3b8699.088ENSORLG00015009200rbfox3b8699.088Oryzias_latipes_hsok
ENSOMEG00000014677rbfox3b7674.394ENSOGAG00000029595RBFOX36874.632Otolemur_garnettii
ENSOMEG00000014677rbfox3b6461.983ENSOARG00000002908RBFOX35860.905Ovis_aries
ENSOMEG00000014677rbfox3b7676.995ENSPPAG00000025383RBFOX38475.969Pan_paniscus
ENSOMEG00000014677rbfox3b7676.526ENSPPRG00000007819RBFOX36875.194Panthera_pardus
ENSOMEG00000014677rbfox3b7676.995ENSPTRG00000009727RBFOX37775.969Pan_troglodytes
ENSOMEG00000014677rbfox3b7676.995ENSPANG00000019837RBFOX37775.969Papio_anubis
ENSOMEG00000014677rbfox3b8683.784ENSPKIG00000010299rbfox3a8684.177Paramormyrops_kingsleyae
ENSOMEG00000014677rbfox3b8166.079ENSPKIG00000022633-7664.590Paramormyrops_kingsleyae
ENSOMEG00000014677rbfox3b8586.585ENSPMGG00000008000rbfox3b9287.302Periophthalmus_magnuspinnatus
ENSOMEG00000014677rbfox3b7676.887ENSPEMG00000010500Rbfox36675.581Peromyscus_maniculatus_bairdii
ENSOMEG00000014677rbfox3b8476.176ENSPCIG00000005766RBFOX37478.095Phascolarctos_cinereus
ENSOMEG00000014677rbfox3b8692.705ENSPFOG00000018294rbfox3b8292.705Poecilia_formosa
ENSOMEG00000014677rbfox3b5481.768ENSPLAG00000000481rbfox3b6097.826Poecilia_latipinna
ENSOMEG00000014677rbfox3b8196.903ENSPMEG00000022997rbfox3b8096.903Poecilia_mexicana
ENSOMEG00000014677rbfox3b8693.313ENSPREG00000012886rbfox3b8493.313Poecilia_reticulata
ENSOMEG00000014677rbfox3b7569.474ENSPPYG00000008704RBFOX37468.889Pongo_abelii
ENSOMEG00000014677rbfox3b7666.667ENSPCAG00000001401RBFOX36674.806Procavia_capensis
ENSOMEG00000014677rbfox3b8176.754ENSPCOG00000012689RBFOX36674.419Propithecus_coquereli
ENSOMEG00000014677rbfox3b7658.025ENSPVAG00000015243RBFOX36665.891Pteropus_vampyrus
ENSOMEG00000014677rbfox3b8577.640ENSPNYG00000009079-8177.419Pundamilia_nyererei
ENSOMEG00000014677rbfox3b8292.880ENSPNYG00000010414rbfox3b8692.880Pundamilia_nyererei
ENSOMEG00000014677rbfox3b8679.762ENSPNAG00000002889rbfox3a8080.251Pygocentrus_nattereri
ENSOMEG00000014677rbfox3b8875.000ENSPNAG00000018173rbfox3b7080.476Pygocentrus_nattereri
ENSOMEG00000014677rbfox3b7667.078ENSRNOG00000003386Rbfox37675.581Rattus_norvegicus
ENSOMEG00000014677rbfox3b8475.312ENSRBIG00000040449RBFOX37975.578Rhinopithecus_bieti
ENSOMEG00000014677rbfox3b7676.995ENSRROG00000000766RBFOX37775.969Rhinopithecus_roxellana
ENSOMEG00000014677rbfox3b7676.526ENSSBOG00000031591RBFOX37775.581Saimiri_boliviensis_boliviensis
ENSOMEG00000014677rbfox3b7676.887ENSSHAG00000016076RBFOX37478.095Sarcophilus_harrisii
ENSOMEG00000014677rbfox3b8467.500ENSSFOG00015004716RBFOX37968.421Scleropages_formosus
ENSOMEG00000014677rbfox3b8682.583ENSSFOG00015023260rbfox3a8082.911Scleropages_formosus
ENSOMEG00000014677rbfox3b8696.657ENSSMAG00000012618rbfox3b7596.657Scophthalmus_maximus
ENSOMEG00000014677rbfox3b8676.453ENSSMAG00000019052-8076.452Scophthalmus_maximus
ENSOMEG00000014677rbfox3b8278.317ENSSDUG00000015801-8478.317Seriola_dumerili
ENSOMEG00000014677rbfox3b8197.345ENSSDUG00000023183rbfox3b8097.345Seriola_dumerili
ENSOMEG00000014677rbfox3b8693.009ENSSLDG00000000149rbfox3b8593.009Seriola_lalandi_dorsalis
ENSOMEG00000014677rbfox3b8578.395ENSSLDG00000016098-8178.387Seriola_lalandi_dorsalis
ENSOMEG00000014677rbfox3b7678.037ENSSPUG00000011733RBFOX37677.132Sphenodon_punctatus
ENSOMEG00000014677rbfox3b8587.037ENSSPAG00000017571rbfox3b8687.037Stegastes_partitus
ENSOMEG00000014677rbfox3b7667.841ENSSPAG00000004898-7368.966Stegastes_partitus
ENSOMEG00000014677rbfox3b6176.623ENSSSCG00000039498RBFOX35977.103Sus_scrofa
ENSOMEG00000014677rbfox3b7689.547ENSTRUG00000004894rbfox3b7290.335Takifugu_rubripes
ENSOMEG00000014677rbfox3b7580.442ENSTNIG00000011278rbfox3b7180.731Tetraodon_nigroviridis
ENSOMEG00000014677rbfox3b7762.602ENSTTRG00000003676RBFOX36668.217Tursiops_truncatus
ENSOMEG00000014677rbfox3b7667.623ENSUAMG00000004668RBFOX37776.357Ursus_americanus
ENSOMEG00000014677rbfox3b8476.250ENSVVUG00000017864RBFOX37775.969Vulpes_vulpes
ENSOMEG00000014677rbfox3b6371.730ENSXETG00000020236rbfox35572.034Xenopus_tropicalis
ENSOMEG00000014677rbfox3b8392.453ENSXCOG00000018262rbfox3b8690.775Xiphophorus_couchianus
ENSOMEG00000014677rbfox3b8693.009ENSXMAG00000012939rbfox3b8593.009Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us