EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000015016 (Gene tree)
Gene ID: 112143628
Gene Symbol: vars
Alias: -
Full Name: valyl-tRNA synthetase
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 21559 bases
Position: chrNVQA01000006.1:5644879-5666437
Accession: 112143628
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000030603	tRNA-synt_1g	PF09334.11	3.3e-12	1	1
ENSOMEP00000030643	tRNA-synt_1g	PF09334.11	3.3e-12	1	1
ENSOMEP00000030603	Anticodon_1	PF08264.13	9.1e-35	1	1
ENSOMEP00000030643	Anticodon_1	PF08264.13	9.1e-35	1	1
ENSOMEP00000030603	tRNA-synt_1	PF00133.22	9.2e-207	1	1
ENSOMEP00000030643	tRNA-synt_1	PF00133.22	9.2e-207	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000033165	-	9000	-	ENSOMEP00000030603	1277 (aa)	XP_024123505	UPI000CF7EB35
ENSOMET00000033182	-	9068	-	ENSOMEP00000030643	1277 (aa)	XP_024123505	UPI000CF7EB35

Gene Model

Click here to download ENSOMEG00000015016's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000015016's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000015016	vars	77	49.951	ENSOMEG00000008360	vars2	99	47.177

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000015016	vars	100	64.660	ENSG00000204394	VARS	99	73.006	Homo_sapiens
ENSOMEG00000015016	vars	94	90.124	ENSAPOG00000020921	vars	96	90.124	Acanthochromis_polyacanthus
ENSOMEG00000015016	vars	94	90.124	ENSAPOG00000020691	vars	96	90.124	Acanthochromis_polyacanthus
ENSOMEG00000015016	vars	100	64.842	ENSAMEG00000006417	VARS	100	64.842	Ailuropoda_melanoleuca
ENSOMEG00000015016	vars	100	89.375	ENSACIG00000013752	vars	100	89.375	Amphilophus_citrinellus
ENSOMEG00000015016	vars	100	90.525	ENSAOCG00000002447	vars	99	90.525	Amphiprion_ocellaris
ENSOMEG00000015016	vars	100	90.368	ENSAPEG00000010638	vars	99	90.368	Amphiprion_percula
ENSOMEG00000015016	vars	100	85.000	ENSATEG00000020219	vars	100	84.688	Anabas_testudineus
ENSOMEG00000015016	vars	90	71.528	ENSACAG00000029133	-	99	71.528	Anolis_carolinensis
ENSOMEG00000015016	vars	100	64.660	ENSANAG00000015453	VARS	100	64.660	Aotus_nancymaae
ENSOMEG00000015016	vars	100	90.532	ENSACLG00000025699	vars	97	90.532	Astatotilapia_calliptera
ENSOMEG00000015016	vars	96	79.462	ENSAMXG00000017716	vars	96	79.527	Astyanax_mexicanus
ENSOMEG00000015016	vars	100	65.167	ENSBTAG00000005631	VARS	100	65.167	Bos_taurus
ENSOMEG00000015016	vars	100	64.660	ENSCJAG00000002604	VARS	100	64.660	Callithrix_jacchus
ENSOMEG00000015016	vars	100	64.934	ENSCAFG00000000636	VARS	100	64.992	Canis_familiaris
ENSOMEG00000015016	vars	94	66.005	ENSCAFG00020020790	VARS	96	66.005	Canis_lupus_dingo
ENSOMEG00000015016	vars	100	65.012	ENSCHIG00000011008	VARS	100	65.012	Capra_hircus
ENSOMEG00000015016	vars	100	64.583	ENSTSYG00000001567	VARS	100	64.583	Carlito_syrichta
ENSOMEG00000015016	vars	90	68.858	ENSCAPG00000013736	VARS	97	68.544	Cavia_aperea
ENSOMEG00000015016	vars	100	64.756	ENSCPOG00000000870	VARS	100	64.469	Cavia_porcellus
ENSOMEG00000015016	vars	100	64.815	ENSCCAG00000035656	VARS	100	64.660	Cebus_capucinus
ENSOMEG00000015016	vars	100	64.946	ENSCATG00000022394	VARS	100	64.969	Cercocebus_atys
ENSOMEG00000015016	vars	93	64.379	ENSCLAG00000009470	VARS	97	64.075	Chinchilla_lanigera
ENSOMEG00000015016	vars	100	64.715	ENSCSAG00000008784	VARS	100	64.738	Chlorocebus_sabaeus
ENSOMEG00000015016	vars	77	74.669	ENSCPBG00000007943	VARS	96	74.669	Chrysemys_picta_bellii
ENSOMEG00000015016	vars	100	64.792	ENSCANG00000033570	VARS	100	64.815	Colobus_angolensis_palliatus
ENSOMEG00000015016	vars	100	64.738	ENSCGRG00001005686	Vars	100	64.815	Cricetulus_griseus_chok1gshd
ENSOMEG00000015016	vars	93	62.887	ENSCGRG00000013352	Vars	78	62.969	Cricetulus_griseus_crigri
ENSOMEG00000015016	vars	100	82.565	ENSCSEG00000019652	vars	100	82.330	Cynoglossus_semilaevis
ENSOMEG00000015016	vars	100	90.219	ENSCVAG00000022398	vars	100	90.219	Cyprinodon_variegatus
ENSOMEG00000015016	vars	100	83.868	ENSDARG00000044575	vars	100	84.116	Danio_rerio
ENSOMEG00000015016	vars	82	71.770	ENSDORG00000016433	Vars	93	71.866	Dipodomys_ordii
ENSOMEG00000015016	vars	68	74.684	ENSETEG00000003824	VARS	77	74.684	Echinops_telfairi
ENSOMEG00000015016	vars	57	65.479	ENSEBUG00000004637	vars	100	65.479	Eptatretus_burgeri
ENSOMEG00000015016	vars	52	72.790	ENSEBUG00000007086	vars	83	72.790	Eptatretus_burgeri
ENSOMEG00000015016	vars	100	65.201	ENSEASG00005015673	VARS	100	65.201	Equus_asinus_asinus
ENSOMEG00000015016	vars	100	65.150	ENSECAG00000014620	VARS	100	65.382	Equus_caballus
ENSOMEG00000015016	vars	72	71.178	ENSEEUG00000004116	VARS	73	71.178	Erinaceus_europaeus
ENSOMEG00000015016	vars	100	83.567	ENSELUG00000006550	vars	97	83.450	Esox_lucius
ENSOMEG00000015016	vars	100	64.892	ENSFCAG00000004510	VARS	100	65.046	Felis_catus
ENSOMEG00000015016	vars	88	71.343	ENSFDAG00000011401	VARS	100	71.156	Fukomys_damarensis
ENSOMEG00000015016	vars	100	88.967	ENSFHEG00000010672	vars	100	89.045	Fundulus_heteroclitus
ENSOMEG00000015016	vars	100	80.748	ENSGMOG00000014908	vars	100	81.138	Gadus_morhua
ENSOMEG00000015016	vars	100	90.063	ENSGAFG00000021630	vars	100	90.063	Gambusia_affinis
ENSOMEG00000015016	vars	93	88.161	ENSGACG00000009601	vars	100	84.338	Gasterosteus_aculeatus
ENSOMEG00000015016	vars	50	58.578	ENSGAGG00000006508	-	91	60.124	Gopherus_agassizii
ENSOMEG00000015016	vars	100	65.046	ENSGGOG00000011364	VARS	100	65.046	Gorilla_gorilla
ENSOMEG00000015016	vars	100	90.532	ENSHBUG00000017151	vars	97	90.532	Haplochromis_burtoni
ENSOMEG00000015016	vars	100	64.984	ENSHGLG00000011646	VARS	100	64.984	Heterocephalus_glaber_female
ENSOMEG00000015016	vars	94	61.769	ENSHGLG00100018062	VARS	99	61.332	Heterocephalus_glaber_male
ENSOMEG00000015016	vars	99	83.881	ENSHCOG00000012198	vars	99	83.881	Hippocampus_comes
ENSOMEG00000015016	vars	100	82.643	ENSIPUG00000005218	vars	100	82.721	Ictalurus_punctatus
ENSOMEG00000015016	vars	100	65.477	ENSSTOG00000013112	VARS	100	65.400	Ictidomys_tridecemlineatus
ENSOMEG00000015016	vars	100	53.220	ENSJJAG00000015343	-	99	54.633	Jaculus_jaculus
ENSOMEG00000015016	vars	100	64.938	ENSJJAG00000019749	-	100	64.646	Jaculus_jaculus
ENSOMEG00000015016	vars	100	86.139	ENSKMAG00000009455	vars	100	86.139	Kryptolebias_marmoratus
ENSOMEG00000015016	vars	100	85.889	ENSLBEG00000010341	vars	99	85.889	Labrus_bergylta
ENSOMEG00000015016	vars	94	66.150	ENSLACG00000015232	VARS	99	66.313	Latimeria_chalumnae
ENSOMEG00000015016	vars	100	74.648	ENSLOCG00000004240	vars	100	74.413	Lepisosteus_oculatus
ENSOMEG00000015016	vars	100	64.556	ENSLAFG00000023090	VARS	100	64.479	Loxodonta_africana
ENSOMEG00000015016	vars	100	64.792	ENSMFAG00000001032	VARS	100	64.815	Macaca_fascicularis
ENSOMEG00000015016	vars	100	64.792	ENSMMUG00000006828	VARS	100	64.815	Macaca_mulatta
ENSOMEG00000015016	vars	100	64.792	ENSMNEG00000042072	VARS	100	64.815	Macaca_nemestrina
ENSOMEG00000015016	vars	100	64.869	ENSMLEG00000039307	VARS	100	64.892	Mandrillus_leucophaeus
ENSOMEG00000015016	vars	100	88.880	ENSMAMG00000003949	vars	100	88.880	Mastacembelus_armatus
ENSOMEG00000015016	vars	100	90.610	ENSMZEG00005018327	vars	97	90.610	Maylandia_zebra
ENSOMEG00000015016	vars	100	64.815	ENSMAUG00000006715	Vars	100	64.892	Mesocricetus_auratus
ENSOMEG00000015016	vars	100	64.665	ENSMICG00000003548	VARS	100	64.583	Microcebus_murinus
ENSOMEG00000015016	vars	100	64.208	ENSMOCG00000015404	Vars	100	64.341	Microtus_ochrogaster
ENSOMEG00000015016	vars	100	85.748	ENSMMOG00000015801	vars	100	85.670	Mola_mola
ENSOMEG00000015016	vars	100	64.892	ENSMODG00000015204	-	100	64.815	Monodelphis_domestica
ENSOMEG00000015016	vars	99	88.323	ENSMALG00000022532	vars	99	88.323	Monopterus_albus
ENSOMEG00000015016	vars	100	65.916	MGP_CAROLIEiJ_G0021491	Vars	100	65.916	Mus_caroli
ENSOMEG00000015016	vars	100	65.761	ENSMUSG00000007029	Vars	100	65.761	Mus_musculus
ENSOMEG00000015016	vars	100	65.683	MGP_PahariEiJ_G0020486	Vars	100	65.683	Mus_pahari
ENSOMEG00000015016	vars	100	65.839	MGP_SPRETEiJ_G0022396	Vars	100	65.839	Mus_spretus
ENSOMEG00000015016	vars	100	65.012	ENSMPUG00000010821	VARS	100	65.012	Mustela_putorius_furo
ENSOMEG00000015016	vars	78	67.726	ENSMLUG00000013126	VARS	100	67.726	Myotis_lucifugus
ENSOMEG00000015016	vars	100	65.116	ENSNGAG00000012151	Vars	100	65.116	Nannospalax_galili
ENSOMEG00000015016	vars	100	90.141	ENSNBRG00000020520	vars	100	90.141	Neolamprologus_brichardi
ENSOMEG00000015016	vars	100	64.869	ENSNLEG00000006351	VARS	100	64.946	Nomascus_leucogenys
ENSOMEG00000015016	vars	94	73.246	ENSMEUG00000011378	VARS	100	63.552	Notamacropus_eugenii
ENSOMEG00000015016	vars	100	64.856	ENSOPRG00000003607	VARS	100	64.934	Ochotona_princeps
ENSOMEG00000015016	vars	100	64.441	ENSODEG00000017681	VARS	100	64.441	Octodon_degus
ENSOMEG00000015016	vars	100	89.798	ENSONIG00000013064	vars	100	92.087	Oreochromis_niloticus
ENSOMEG00000015016	vars	77	67.606	ENSOANG00000005400	VARS	98	67.606	Ornithorhynchus_anatinus
ENSOMEG00000015016	vars	100	63.390	ENSOCUG00000022463	VARS	100	63.524	Oryctolagus_cuniculus
ENSOMEG00000015016	vars	100	96.262	ENSORLG00000013063	vars	100	96.262	Oryzias_latipes
ENSOMEG00000015016	vars	100	96.870	ENSORLG00020003504	vars	100	96.870	Oryzias_latipes_hni
ENSOMEG00000015016	vars	100	97.024	ENSORLG00015009001	vars	100	97.024	Oryzias_latipes_hsok
ENSOMEG00000015016	vars	100	64.660	ENSOGAG00000007515	VARS	100	64.660	Otolemur_garnettii
ENSOMEG00000015016	vars	100	64.660	ENSPPAG00000034012	VARS	100	64.660	Pan_paniscus
ENSOMEG00000015016	vars	100	64.892	ENSPPRG00000014855	VARS	100	65.046	Panthera_pardus
ENSOMEG00000015016	vars	85	68.909	ENSPTIG00000010462	VARS	94	68.643	Panthera_tigris_altaica
ENSOMEG00000015016	vars	100	64.660	ENSPTRG00000017985	VARS	100	64.660	Pan_troglodytes
ENSOMEG00000015016	vars	100	63.420	ENSPANG00000014565	VARS	100	63.441	Papio_anubis
ENSOMEG00000015016	vars	100	81.386	ENSPKIG00000016304	vars	100	81.386	Paramormyrops_kingsleyae
ENSOMEG00000015016	vars	100	83.320	ENSPMGG00000023909	vars	100	83.085	Periophthalmus_magnuspinnatus
ENSOMEG00000015016	vars	100	64.892	ENSPEMG00000006639	Vars	100	64.969	Peromyscus_maniculatus_bairdii
ENSOMEG00000015016	vars	100	65.244	ENSPCIG00000018553	VARS	100	65.167	Phascolarctos_cinereus
ENSOMEG00000015016	vars	100	90.141	ENSPFOG00000015690	vars	100	90.141	Poecilia_formosa
ENSOMEG00000015016	vars	100	90.063	ENSPLAG00000009590	vars	100	90.063	Poecilia_latipinna
ENSOMEG00000015016	vars	100	90.063	ENSPMEG00000004708	vars	100	90.063	Poecilia_mexicana
ENSOMEG00000015016	vars	100	84.507	ENSPREG00000013264	vars	99	92.505	Poecilia_reticulata
ENSOMEG00000015016	vars	100	63.069	ENSPPYG00000016460	VARS	100	63.426	Pongo_abelii
ENSOMEG00000015016	vars	86	66.785	ENSPCAG00000013565	VARS	86	66.785	Procavia_capensis
ENSOMEG00000015016	vars	100	64.534	ENSPCOG00000010942	VARS	100	64.765	Propithecus_coquereli
ENSOMEG00000015016	vars	100	62.327	ENSPVAG00000012403	VARS	100	62.577	Pteropus_vampyrus
ENSOMEG00000015016	vars	100	90.610	ENSPNYG00000022511	vars	100	90.610	Pundamilia_nyererei
ENSOMEG00000015016	vars	100	83.372	ENSPNAG00000020962	vars	100	83.607	Pygocentrus_nattereri
ENSOMEG00000015016	vars	100	65.477	ENSRNOG00000000867	Vars	100	65.322	Rattus_norvegicus
ENSOMEG00000015016	vars	100	64.792	ENSRBIG00000041669	VARS	100	64.815	Rhinopithecus_bieti
ENSOMEG00000015016	vars	100	64.792	ENSRROG00000045490	VARS	100	64.815	Rhinopithecus_roxellana
ENSOMEG00000015016	vars	100	64.198	ENSSBOG00000035402	VARS	100	64.198	Saimiri_boliviensis_boliviensis
ENSOMEG00000015016	vars	100	64.411	ENSSHAG00000006937	VARS	100	64.583	Sarcophilus_harrisii
ENSOMEG00000015016	vars	100	80.281	ENSSFOG00015014272	vars	99	85.264	Scleropages_formosus
ENSOMEG00000015016	vars	100	88.019	ENSSMAG00000009596	vars	99	88.019	Scophthalmus_maximus
ENSOMEG00000015016	vars	100	90.760	ENSSDUG00000014177	vars	100	90.760	Seriola_dumerili
ENSOMEG00000015016	vars	100	90.368	ENSSLDG00000025316	vars	100	90.368	Seriola_lalandi_dorsalis
ENSOMEG00000015016	vars	100	90.055	ENSSPAG00000017068	vars	100	90.055	Stegastes_partitus
ENSOMEG00000015016	vars	100	64.225	ENSSSCG00000038950	VARS	100	64.456	Sus_scrofa
ENSOMEG00000015016	vars	81	81.853	ENSTRUG00000012307	vars	97	81.827	Takifugu_rubripes
ENSOMEG00000015016	vars	100	85.848	ENSTNIG00000008011	vars	100	85.848	Tetraodon_nigroviridis
ENSOMEG00000015016	vars	100	59.084	ENSTTRG00000014128	VARS	100	59.161	Tursiops_truncatus
ENSOMEG00000015016	vars	100	63.552	ENSUAMG00000010424	VARS	100	63.629	Ursus_americanus
ENSOMEG00000015016	vars	100	59.861	ENSUMAG00000013486	VARS	98	64.014	Ursus_maritimus
ENSOMEG00000015016	vars	100	65.298	ENSVVUG00000021323	VARS	100	65.039	Vulpes_vulpes
ENSOMEG00000015016	vars	100	63.953	ENSXETG00000024076	vars	100	63.679	Xenopus_tropicalis
ENSOMEG00000015016	vars	100	87.402	ENSXCOG00000019172	vars	100	87.402	Xiphophorus_couchianus
ENSOMEG00000015016	vars	100	89.906	ENSXMAG00000010927	vars	100	89.906	Xiphophorus_maculatus