EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOMEG00000015042 (Gene tree)
Gene ID: 112162346
Gene Symbol: bms1
Alias: -
Full Name: BMS1%2C ribosome biogenesis factor
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 13896 bases
Position: chrNVQA01000029.1:1124494-1138389
Accession: 112162346
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000030645	AARP2CN	PF08142.12	2.5e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000021213	-	4179	XM_024298153	ENSOMEP00000030645	1191 (aa)	XP_024153921	UPI000CF7CD04

Gene Model

Click here to download ENSOMEG00000015042's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000015042's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000015042	bms1	96	66.992	ENSG00000165733	BMS1	87	68.590	Homo_sapiens
ENSOMEG00000015042	bms1	87	81.002	ENSAPOG00000002296	bms1	99	80.813	Acanthochromis_polyacanthus
ENSOMEG00000015042	bms1	96	68.226	ENSAMEG00000016834	BMS1	87	69.368	Ailuropoda_melanoleuca
ENSOMEG00000015042	bms1	99	78.086	ENSACIG00000002588	bms1	99	77.348	Amphilophus_citrinellus
ENSOMEG00000015042	bms1	99	80.839	ENSAOCG00000018088	bms1	99	81.019	Amphiprion_ocellaris
ENSOMEG00000015042	bms1	100	80.988	ENSAPEG00000014673	bms1	100	81.086	Amphiprion_percula
ENSOMEG00000015042	bms1	99	80.590	ENSATEG00000023465	bms1	99	79.934	Anabas_testudineus
ENSOMEG00000015042	bms1	95	63.089	ENSAPLG00000003759	BMS1	87	72.085	Anas_platyrhynchos
ENSOMEG00000015042	bms1	99	64.645	ENSACAG00000004537	-	82	73.182	Anolis_carolinensis
ENSOMEG00000015042	bms1	52	68.921	ENSANAG00000023432	BMS1	87	69.318	Aotus_nancymaae
ENSOMEG00000015042	bms1	99	79.619	ENSACLG00000001294	bms1	99	79.734	Astatotilapia_calliptera
ENSOMEG00000015042	bms1	52	76.763	ENSAMXG00000011236	bms1	50	76.923	Astyanax_mexicanus
ENSOMEG00000015042	bms1	55	67.020	ENSBTAG00000012878	BMS1	87	70.130	Bos_taurus
ENSOMEG00000015042	bms1	85	52.882	WBGene00022021	Y61A9LA.10	94	53.000	Caenorhabditis_elegans
ENSOMEG00000015042	bms1	98	68.616	ENSCJAG00000021705	BMS1	87	69.431	Callithrix_jacchus
ENSOMEG00000015042	bms1	98	69.531	ENSCAFG00000007114	BMS1	87	69.625	Canis_familiaris
ENSOMEG00000015042	bms1	98	69.531	ENSCAFG00020025282	BMS1	87	69.625	Canis_lupus_dingo
ENSOMEG00000015042	bms1	55	67.171	ENSCHIG00000023251	BMS1	81	75.463	Capra_hircus
ENSOMEG00000015042	bms1	99	58.856	ENSCAPG00000008652	BMS1	81	72.685	Cavia_aperea
ENSOMEG00000015042	bms1	99	62.147	ENSCPOG00000000502	BMS1	82	73.843	Cavia_porcellus
ENSOMEG00000015042	bms1	96	58.085	ENSCCAG00000024969	-	78	58.958	Cebus_capucinus
ENSOMEG00000015042	bms1	96	67.515	ENSCATG00000030625	-	87	68.480	Cercocebus_atys
ENSOMEG00000015042	bms1	84	53.448	ENSCATG00000008695	-	74	57.634	Cercocebus_atys
ENSOMEG00000015042	bms1	99	61.285	ENSCLAG00000002446	BMS1	87	68.506	Chinchilla_lanigera
ENSOMEG00000015042	bms1	96	67.641	ENSCSAG00000011118	BMS1	87	69.530	Chlorocebus_sabaeus
ENSOMEG00000015042	bms1	99	61.845	ENSCHOG00000011055	BMS1	87	69.206	Choloepus_hoffmanni
ENSOMEG00000015042	bms1	98	68.738	ENSCPBG00000025581	BMS1	80	75.227	Chrysemys_picta_bellii
ENSOMEG00000015042	bms1	83	62.850	ENSCING00000003181	-	95	62.850	Ciona_intestinalis
ENSOMEG00000015042	bms1	73	54.118	ENSCSAVG00000004113	-	87	54.023	Ciona_savignyi
ENSOMEG00000015042	bms1	96	68.627	ENSCANG00000011609	BMS1	87	69.854	Colobus_angolensis_palliatus
ENSOMEG00000015042	bms1	98	63.320	ENSCGRG00001019461	Bms1	88	68.921	Cricetulus_griseus_chok1gshd
ENSOMEG00000015042	bms1	98	63.320	ENSCGRG00000009016	Bms1	88	68.921	Cricetulus_griseus_crigri
ENSOMEG00000015042	bms1	99	76.059	ENSCSEG00000002469	bms1	99	75.580	Cynoglossus_semilaevis
ENSOMEG00000015042	bms1	99	81.218	ENSCVAG00000008371	bms1	99	81.537	Cyprinodon_variegatus
ENSOMEG00000015042	bms1	100	73.453	ENSDARG00000054154	bms1	99	72.638	Danio_rerio
ENSOMEG00000015042	bms1	97	67.045	ENSDNOG00000015761	BMS1	81	74.483	Dasypus_novemcinctus
ENSOMEG00000015042	bms1	52	69.181	ENSDORG00000002982	Bms1	87	69.839	Dipodomys_ordii
ENSOMEG00000015042	bms1	84	66.071	ENSETEG00000009554	BMS1	78	66.071	Echinops_telfairi
ENSOMEG00000015042	bms1	99	62.393	ENSEASG00005006894	BMS1	88	69.775	Equus_asinus_asinus
ENSOMEG00000015042	bms1	99	63.232	ENSECAG00000001358	BMS1	88	69.614	Equus_caballus
ENSOMEG00000015042	bms1	99	73.295	ENSELUG00000001756	bms1	76	86.649	Esox_lucius
ENSOMEG00000015042	bms1	99	62.793	ENSFCAG00000011220	BMS1	87	69.368	Felis_catus
ENSOMEG00000015042	bms1	99	66.359	ENSFALG00000006882	BMS1	86	69.887	Ficedula_albicollis
ENSOMEG00000015042	bms1	99	61.454	ENSFDAG00000001422	BMS1	82	73.380	Fukomys_damarensis
ENSOMEG00000015042	bms1	99	81.478	ENSFHEG00000003367	bms1	99	80.805	Fundulus_heteroclitus
ENSOMEG00000015042	bms1	99	71.669	ENSGMOG00000000718	bms1	53	77.134	Gadus_morhua
ENSOMEG00000015042	bms1	99	62.096	ENSGALG00000002624	BMS1	87	70.130	Gallus_gallus
ENSOMEG00000015042	bms1	96	83.360	ENSGACG00000015334	bms1	89	83.360	Gasterosteus_aculeatus
ENSOMEG00000015042	bms1	96	69.952	ENSGAGG00000003467	BMS1	83	74.545	Gopherus_agassizii
ENSOMEG00000015042	bms1	99	79.917	ENSHBUG00000022628	bms1	99	79.950	Haplochromis_burtoni
ENSOMEG00000015042	bms1	99	61.987	ENSHGLG00000000477	BMS1	88	68.831	Heterocephalus_glaber_female
ENSOMEG00000015042	bms1	99	62.066	ENSHGLG00100002176	BMS1	88	68.831	Heterocephalus_glaber_male
ENSOMEG00000015042	bms1	99	78.589	ENSHCOG00000017604	bms1	99	78.523	Hippocampus_comes
ENSOMEG00000015042	bms1	99	70.978	ENSIPUG00000017855	bms1	50	79.040	Ictalurus_punctatus
ENSOMEG00000015042	bms1	97	69.531	ENSSTOG00000015063	BMS1	87	69.625	Ictidomys_tridecemlineatus
ENSOMEG00000015042	bms1	53	67.132	ENSJJAG00000017328	Bms1	87	69.206	Jaculus_jaculus
ENSOMEG00000015042	bms1	65	75.161	ENSKMAG00000021982	bms1	97	74.903	Kryptolebias_marmoratus
ENSOMEG00000015042	bms1	99	77.860	ENSLBEG00000028208	bms1	99	77.860	Labrus_bergylta
ENSOMEG00000015042	bms1	99	57.642	ENSLACG00000001600	BMS1	81	75.366	Latimeria_chalumnae
ENSOMEG00000015042	bms1	97	72.362	ENSLOCG00000012914	bms1	99	71.233	Lepisosteus_oculatus
ENSOMEG00000015042	bms1	99	67.130	ENSLAFG00000006250	BMS1	87	69.368	Loxodonta_africana
ENSOMEG00000015042	bms1	87	67.710	ENSMFAG00000037771	BMS1	96	67.525	Macaca_fascicularis
ENSOMEG00000015042	bms1	88	61.284	ENSMMUG00000007426	-	78	64.471	Macaca_mulatta
ENSOMEG00000015042	bms1	80	54.043	ENSMLEG00000029084	-	79	57.214	Mandrillus_leucophaeus
ENSOMEG00000015042	bms1	99	78.207	ENSMAMG00000020855	bms1	99	78.117	Mastacembelus_armatus
ENSOMEG00000015042	bms1	99	79.536	ENSMZEG00005005663	bms1	99	79.651	Maylandia_zebra
ENSOMEG00000015042	bms1	91	70.617	ENSMGAG00000001170	BMS1	86	70.617	Meleagris_gallopavo
ENSOMEG00000015042	bms1	98	62.835	ENSMAUG00000002195	Bms1	83	74.487	Mesocricetus_auratus
ENSOMEG00000015042	bms1	97	68.164	ENSMICG00000009977	BMS1	87	68.898	Microcebus_murinus
ENSOMEG00000015042	bms1	98	67.180	ENSMOCG00000002038	Bms1	88	69.044	Microtus_ochrogaster
ENSOMEG00000015042	bms1	99	79.424	ENSMMOG00000000977	bms1	99	79.348	Mola_mola
ENSOMEG00000015042	bms1	99	62.357	ENSMODG00000001177	BMS1	87	70.048	Monodelphis_domestica
ENSOMEG00000015042	bms1	99	79.308	ENSMALG00000009680	bms1	99	79.339	Monopterus_albus
ENSOMEG00000015042	bms1	80	80.342	MGP_CAROLIEiJ_G0028785	-	63	80.342	Mus_caroli
ENSOMEG00000015042	bms1	98	62.205	ENSMUSG00000030138	Bms1	88	68.182	Mus_musculus
ENSOMEG00000015042	bms1	94	68.498	MGP_PahariEiJ_G0022539	Bms1	88	68.506	Mus_pahari
ENSOMEG00000015042	bms1	56	62.447	MGP_SPRETEiJ_G0029816	Bms1	88	67.573	Mus_spretus
ENSOMEG00000015042	bms1	97	68.872	ENSMPUG00000017276	BMS1	88	69.625	Mustela_putorius_furo
ENSOMEG00000015042	bms1	99	62.794	ENSMLUG00000003260	BMS1	87	69.805	Myotis_lucifugus
ENSOMEG00000015042	bms1	99	57.925	ENSNGAG00000015258	Bms1	85	69.481	Nannospalax_galili
ENSOMEG00000015042	bms1	96	66.405	ENSNLEG00000015791	BMS1	87	68.317	Nomascus_leucogenys
ENSOMEG00000015042	bms1	85	77.667	ENSOPRG00000005195	BMS1	79	77.667	Ochotona_princeps
ENSOMEG00000015042	bms1	99	61.285	ENSODEG00000005554	BMS1	87	68.506	Octodon_degus
ENSOMEG00000015042	bms1	99	80.264	ENSONIG00000007227	bms1	99	80.166	Oreochromis_niloticus
ENSOMEG00000015042	bms1	99	62.191	ENSOANG00000000662	-	82	74.483	Ornithorhynchus_anatinus
ENSOMEG00000015042	bms1	94	69.194	ENSOCUG00000005354	BMS1	87	69.368	Oryctolagus_cuniculus
ENSOMEG00000015042	bms1	100	89.623	ENSORLG00000014655	bms1	100	89.623	Oryzias_latipes
ENSOMEG00000015042	bms1	100	85.270	ENSORLG00020016246	bms1	81	88.627	Oryzias_latipes_hni
ENSOMEG00000015042	bms1	100	85.796	ENSORLG00015014183	bms1	92	88.268	Oryzias_latipes_hsok
ENSOMEG00000015042	bms1	99	61.676	ENSOGAG00000006511	BMS1	87	69.305	Otolemur_garnettii
ENSOMEG00000015042	bms1	55	67.322	ENSOARG00000003900	BMS1	87	70.455	Ovis_aries
ENSOMEG00000015042	bms1	96	67.188	ENSPPAG00000027837	BMS1	87	66.667	Pan_paniscus
ENSOMEG00000015042	bms1	99	61.989	ENSPPRG00000001311	BMS1	87	69.318	Panthera_pardus
ENSOMEG00000015042	bms1	99	62.187	ENSPTIG00000009652	BMS1	87	69.505	Panthera_tigris_altaica
ENSOMEG00000015042	bms1	96	67.492	ENSPTRG00000002441	BMS1	87	68.960	Pan_troglodytes
ENSOMEG00000015042	bms1	97	75.598	ENSPKIG00000008165	bms1	88	77.885	Paramormyrops_kingsleyae
ENSOMEG00000015042	bms1	96	67.453	ENSPSIG00000006481	BMS1	81	74.886	Pelodiscus_sinensis
ENSOMEG00000015042	bms1	56	54.403	ENSPEMG00000022467	Bms1	87	67.969	Peromyscus_maniculatus_bairdii
ENSOMEG00000015042	bms1	95	68.821	ENSPCIG00000001339	BMS1	85	73.729	Phascolarctos_cinereus
ENSOMEG00000015042	bms1	95	84.142	ENSPFOG00000015180	bms1	99	78.839	Poecilia_formosa
ENSOMEG00000015042	bms1	99	79.899	ENSPMEG00000023176	bms1	94	80.033	Poecilia_mexicana
ENSOMEG00000015042	bms1	99	79.813	ENSPREG00000002695	bms1	99	79.983	Poecilia_reticulata
ENSOMEG00000015042	bms1	54	67.641	ENSPPYG00000002836	-	79	67.251	Pongo_abelii
ENSOMEG00000015042	bms1	72	75.510	ENSPCAG00000014528	BMS1	70	73.843	Procavia_capensis
ENSOMEG00000015042	bms1	92	68.043	ENSPCOG00000023834	-	86	68.433	Propithecus_coquereli
ENSOMEG00000015042	bms1	55	63.348	ENSPVAG00000000725	BMS1	88	67.391	Pteropus_vampyrus
ENSOMEG00000015042	bms1	99	78.087	ENSPNYG00000018866	bms1	91	78.664	Pundamilia_nyererei
ENSOMEG00000015042	bms1	54	78.221	ENSPNAG00000000676	bms1	90	80.417	Pygocentrus_nattereri
ENSOMEG00000015042	bms1	79	67.442	ENSRNOG00000006576	Bms1	78	73.853	Rattus_norvegicus
ENSOMEG00000015042	bms1	98	66.970	ENSRROG00000040101	BMS1	85	72.008	Rhinopithecus_roxellana
ENSOMEG00000015042	bms1	95	69.726	ENSSBOG00000035778	BMS1	87	70.130	Saimiri_boliviensis_boliviensis
ENSOMEG00000015042	bms1	98	66.543	ENSSHAG00000005062	BMS1	80	74.773	Sarcophilus_harrisii
ENSOMEG00000015042	bms1	52	79.294	ENSSFOG00015022313	bms1	93	77.157	Scleropages_formosus
ENSOMEG00000015042	bms1	99	78.057	ENSSMAG00000019966	bms1	99	78.866	Scophthalmus_maximus
ENSOMEG00000015042	bms1	100	80.375	ENSSDUG00000016875	bms1	100	80.537	Seriola_dumerili
ENSOMEG00000015042	bms1	100	80.065	ENSSLDG00000015199	bms1	100	77.637	Seriola_lalandi_dorsalis
ENSOMEG00000015042	bms1	52	75.728	ENSSARG00000014407	BMS1	66	75.728	Sorex_araneus
ENSOMEG00000015042	bms1	98	69.887	ENSSPUG00000014454	BMS1	81	74.434	Sphenodon_punctatus
ENSOMEG00000015042	bms1	97	69.080	ENSSSCG00000010198	BMS1	87	70.048	Sus_scrofa
ENSOMEG00000015042	bms1	95	70.113	ENSTGUG00000006302	-	80	73.636	Taeniopygia_guttata
ENSOMEG00000015042	bms1	99	72.811	ENSTRUG00000008028	bms1	99	72.957	Takifugu_rubripes
ENSOMEG00000015042	bms1	98	76.423	ENSTNIG00000006216	bms1	83	80.549	Tetraodon_nigroviridis
ENSOMEG00000015042	bms1	65	70.946	ENSTBEG00000001673	-	64	70.492	Tupaia_belangeri
ENSOMEG00000015042	bms1	97	67.901	ENSTTRG00000007983	BMS1	79	77.833	Tursiops_truncatus
ENSOMEG00000015042	bms1	54	67.075	ENSUAMG00000023996	BMS1	88	69.763	Ursus_americanus
ENSOMEG00000015042	bms1	54	66.922	ENSUMAG00000016523	BMS1	88	69.763	Ursus_maritimus
ENSOMEG00000015042	bms1	86	65.934	ENSVPAG00000007477	BMS1	81	72.939	Vicugna_pacos
ENSOMEG00000015042	bms1	96	69.531	ENSVVUG00000021305	BMS1	89	69.625	Vulpes_vulpes
ENSOMEG00000015042	bms1	98	62.470	ENSXETG00000008158	bms1	90	65.571	Xenopus_tropicalis
ENSOMEG00000015042	bms1	99	77.963	ENSXCOG00000000506	bms1	95	89.552	Xiphophorus_couchianus
ENSOMEG00000015042	bms1	99	79.983	ENSXMAG00000014236	bms1	99	80.402	Xiphophorus_maculatus