EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000015066 (Gene tree)
Gene ID: 112155395
Gene Symbol: rabl3
Alias: -
Full Name: RAB%2C member of RAS oncogene family like 3
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 8363 bases
Position: chrNVQA01000019.1:2356598-2364960
Accession: 112155395
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000030668	MMR_HSR1	PF01926.23	7.3e-06	1	1
ENSOMEP00000030669	MMR_HSR1	PF01926.23	8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000021258	-	3696	-	ENSOMEP00000030669	233 (aa)	XP_024142757	UPI000CF7F213
ENSOMET00000021346	-	669	-	ENSOMEP00000030668	222 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000015066's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000015066's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000015066	rabl3	55	31.405	ENSOMEG00000017881	-	53	31.405
ENSOMEG00000015066	rabl3	50	31.250	ENSOMEG00000009701	RAB9A	52	31.250

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000015066	rabl3	100	85.169	ENSG00000144840	RABL3	100	93.023	Homo_sapiens
ENSOMEG00000015066	rabl3	100	96.154	ENSAPOG00000024479	rabl3	100	96.154	Acanthochromis_polyacanthus
ENSOMEG00000015066	rabl3	100	86.017	ENSAMEG00000004809	RABL3	100	86.017	Ailuropoda_melanoleuca
ENSOMEG00000015066	rabl3	100	92.982	ENSACIG00000014343	rabl3	100	92.982	Amphilophus_citrinellus
ENSOMEG00000015066	rabl3	100	96.154	ENSAOCG00000011851	rabl3	100	96.154	Amphiprion_ocellaris
ENSOMEG00000015066	rabl3	100	96.154	ENSAPEG00000011214	rabl3	100	96.154	Amphiprion_percula
ENSOMEG00000015066	rabl3	100	96.567	ENSATEG00000003503	rabl3	100	96.567	Anabas_testudineus
ENSOMEG00000015066	rabl3	100	81.356	ENSACAG00000011313	-	100	81.356	Anolis_carolinensis
ENSOMEG00000015066	rabl3	100	87.288	ENSANAG00000027278	RABL3	100	87.288	Aotus_nancymaae
ENSOMEG00000015066	rabl3	100	96.567	ENSACLG00000009820	rabl3	100	96.567	Astatotilapia_calliptera
ENSOMEG00000015066	rabl3	100	93.133	ENSAMXG00000038716	rabl3	100	93.133	Astyanax_mexicanus
ENSOMEG00000015066	rabl3	100	87.288	ENSBTAG00000015898	RABL3	100	87.288	Bos_taurus
ENSOMEG00000015066	rabl3	100	87.288	ENSCJAG00000008611	RABL3	100	87.288	Callithrix_jacchus
ENSOMEG00000015066	rabl3	100	86.864	ENSCAFG00000011292	RABL3	89	86.864	Canis_familiaris
ENSOMEG00000015066	rabl3	100	86.864	ENSCAFG00020006397	RABL3	100	86.864	Canis_lupus_dingo
ENSOMEG00000015066	rabl3	100	87.288	ENSCHIG00000017365	RABL3	100	87.288	Capra_hircus
ENSOMEG00000015066	rabl3	100	85.593	ENSCPOG00000009645	RABL3	100	85.593	Cavia_porcellus
ENSOMEG00000015066	rabl3	100	85.593	ENSCATG00000032561	RABL3	100	85.593	Cercocebus_atys
ENSOMEG00000015066	rabl3	100	85.169	ENSCLAG00000010855	RABL3	100	85.169	Chinchilla_lanigera
ENSOMEG00000015066	rabl3	99	85.408	ENSCSAG00000007155	RABL3	100	85.408	Chlorocebus_sabaeus
ENSOMEG00000015066	rabl3	100	86.864	ENSCPBG00000001999	RABL3	100	86.864	Chrysemys_picta_bellii
ENSOMEG00000015066	rabl3	100	85.593	ENSCANG00000031684	RABL3	100	85.593	Colobus_angolensis_palliatus
ENSOMEG00000015066	rabl3	100	83.051	ENSCGRG00001021537	Rabl3	100	83.051	Cricetulus_griseus_chok1gshd
ENSOMEG00000015066	rabl3	100	83.051	ENSCGRG00000002114	Rabl3	100	83.051	Cricetulus_griseus_crigri
ENSOMEG00000015066	rabl3	100	85.586	ENSCSEG00000014982	rabl3	100	85.586	Cynoglossus_semilaevis
ENSOMEG00000015066	rabl3	100	83.333	ENSCVAG00000009904	rabl3	100	83.333	Cyprinodon_variegatus
ENSOMEG00000015066	rabl3	100	93.562	ENSDARG00000040959	rabl3	100	93.562	Danio_rerio
ENSOMEG00000015066	rabl3	100	85.593	ENSDNOG00000008174	RABL3	100	85.593	Dasypus_novemcinctus
ENSOMEG00000015066	rabl3	100	85.169	ENSETEG00000010206	RABL3	100	85.169	Echinops_telfairi
ENSOMEG00000015066	rabl3	100	87.288	ENSECAG00000023059	RABL3	100	87.288	Equus_caballus
ENSOMEG00000015066	rabl3	100	81.356	ENSEEUG00000002897	RABL3	100	81.356	Erinaceus_europaeus
ENSOMEG00000015066	rabl3	100	92.275	ENSELUG00000014758	rabl3	100	92.275	Esox_lucius
ENSOMEG00000015066	rabl3	100	86.864	ENSFCAG00000031879	RABL3	100	78.222	Felis_catus
ENSOMEG00000015066	rabl3	100	84.746	ENSFALG00000005296	RABL3	100	84.746	Ficedula_albicollis
ENSOMEG00000015066	rabl3	100	85.957	ENSFDAG00000000307	RABL3	100	85.957	Fukomys_damarensis
ENSOMEG00000015066	rabl3	100	92.704	ENSFHEG00000011273	rabl3	100	92.704	Fundulus_heteroclitus
ENSOMEG00000015066	rabl3	100	94.850	ENSGMOG00000007845	rabl3	100	94.850	Gadus_morhua
ENSOMEG00000015066	rabl3	100	86.017	ENSGALG00000014949	RABL3	100	86.017	Gallus_gallus
ENSOMEG00000015066	rabl3	100	91.845	ENSGAFG00000015953	rabl3	100	91.845	Gambusia_affinis
ENSOMEG00000015066	rabl3	100	93.562	ENSGACG00000007387	rabl3	100	93.798	Gasterosteus_aculeatus
ENSOMEG00000015066	rabl3	100	87.288	ENSGAGG00000003677	RABL3	100	87.288	Gopherus_agassizii
ENSOMEG00000015066	rabl3	100	85.169	ENSGGOG00000006059	RABL3	100	85.169	Gorilla_gorilla
ENSOMEG00000015066	rabl3	100	96.996	ENSHBUG00000019478	rabl3	93	96.996	Haplochromis_burtoni
ENSOMEG00000015066	rabl3	100	85.957	ENSHGLG00000014491	RABL3	100	85.957	Heterocephalus_glaber_female
ENSOMEG00000015066	rabl3	100	85.957	ENSHGLG00100004866	RABL3	100	85.957	Heterocephalus_glaber_male
ENSOMEG00000015066	rabl3	100	85.135	ENSHCOG00000019245	rabl3	100	85.135	Hippocampus_comes
ENSOMEG00000015066	rabl3	100	91.845	ENSIPUG00000012657	rabl3	100	91.845	Ictalurus_punctatus
ENSOMEG00000015066	rabl3	100	85.169	ENSSTOG00000019452	RABL3	100	85.169	Ictidomys_tridecemlineatus
ENSOMEG00000015066	rabl3	100	76.889	ENSJJAG00000023553	Rabl3	100	76.889	Jaculus_jaculus
ENSOMEG00000015066	rabl3	100	91.416	ENSKMAG00000015464	rabl3	100	91.416	Kryptolebias_marmoratus
ENSOMEG00000015066	rabl3	100	95.299	ENSLBEG00000010627	-	100	95.299	Labrus_bergylta
ENSOMEG00000015066	rabl3	100	95.299	ENSLBEG00000020595	rabl3	100	95.299	Labrus_bergylta
ENSOMEG00000015066	rabl3	100	87.712	ENSLOCG00000006265	rabl3	100	87.712	Lepisosteus_oculatus
ENSOMEG00000015066	rabl3	100	86.864	ENSLAFG00000003711	RABL3	100	86.864	Loxodonta_africana
ENSOMEG00000015066	rabl3	100	85.593	ENSMFAG00000031923	RABL3	100	85.593	Macaca_fascicularis
ENSOMEG00000015066	rabl3	100	76.889	ENSMMUG00000001594	RABL3	100	76.889	Macaca_mulatta
ENSOMEG00000015066	rabl3	100	85.593	ENSMNEG00000043980	RABL3	100	85.593	Macaca_nemestrina
ENSOMEG00000015066	rabl3	100	85.593	ENSMLEG00000028177	RABL3	100	85.593	Mandrillus_leucophaeus
ENSOMEG00000015066	rabl3	100	95.708	ENSMAMG00000015155	rabl3	100	95.708	Mastacembelus_armatus
ENSOMEG00000015066	rabl3	100	96.567	ENSMZEG00005002607	rabl3	100	96.567	Maylandia_zebra
ENSOMEG00000015066	rabl3	100	83.051	ENSMAUG00000013022	Rabl3	100	83.051	Mesocricetus_auratus
ENSOMEG00000015066	rabl3	100	86.441	ENSMICG00000049288	RABL3	100	86.441	Microcebus_murinus
ENSOMEG00000015066	rabl3	100	82.627	ENSMOCG00000015237	Rabl3	100	82.627	Microtus_ochrogaster
ENSOMEG00000015066	rabl3	100	92.105	ENSMMOG00000005628	rabl3	100	92.105	Mola_mola
ENSOMEG00000015066	rabl3	100	86.441	ENSMODG00000018232	RABL3	100	86.441	Monodelphis_domestica
ENSOMEG00000015066	rabl3	100	88.983	ENSMALG00000018837	rabl3	100	88.983	Monopterus_albus
ENSOMEG00000015066	rabl3	100	83.051	MGP_CAROLIEiJ_G0020728	Rabl3	100	92.248	Mus_caroli
ENSOMEG00000015066	rabl3	100	83.051	ENSMUSG00000022827	Rabl3	100	92.248	Mus_musculus
ENSOMEG00000015066	rabl3	100	82.627	MGP_PahariEiJ_G0016429	Rabl3	100	92.248	Mus_pahari
ENSOMEG00000015066	rabl3	100	83.051	MGP_SPRETEiJ_G0021628	Rabl3	100	92.248	Mus_spretus
ENSOMEG00000015066	rabl3	100	86.864	ENSMPUG00000008257	RABL3	89	86.864	Mustela_putorius_furo
ENSOMEG00000015066	rabl3	100	86.017	ENSMLUG00000014113	RABL3	100	86.017	Myotis_lucifugus
ENSOMEG00000015066	rabl3	99	76.923	ENSNGAG00000001939	Rabl3	99	76.923	Nannospalax_galili
ENSOMEG00000015066	rabl3	94	95.909	ENSNBRG00000012423	rabl3	94	95.909	Neolamprologus_brichardi
ENSOMEG00000015066	rabl3	100	85.169	ENSNLEG00000031723	RABL3	100	85.169	Nomascus_leucogenys
ENSOMEG00000015066	rabl3	100	85.593	ENSMEUG00000006606	RABL3	100	85.593	Notamacropus_eugenii
ENSOMEG00000015066	rabl3	100	85.169	ENSODEG00000004758	-	100	85.169	Octodon_degus
ENSOMEG00000015066	rabl3	100	97.425	ENSONIG00000004281	rabl3	100	97.425	Oreochromis_niloticus
ENSOMEG00000015066	rabl3	99	84.615	ENSOANG00000003928	RABL3	99	84.615	Ornithorhynchus_anatinus
ENSOMEG00000015066	rabl3	100	98.712	ENSORLG00000020457	rabl3	100	98.712	Oryzias_latipes
ENSOMEG00000015066	rabl3	100	98.712	ENSORLG00020008991	rabl3	100	98.198	Oryzias_latipes_hni
ENSOMEG00000015066	rabl3	100	98.712	ENSORLG00015005649	rabl3	88	98.712	Oryzias_latipes_hsok
ENSOMEG00000015066	rabl3	100	85.593	ENSOGAG00000005961	RABL3	100	85.593	Otolemur_garnettii
ENSOMEG00000015066	rabl3	100	87.288	ENSOARG00000019939	RABL3	100	87.288	Ovis_aries
ENSOMEG00000015066	rabl3	94	83.784	ENSPPAG00000036997	RABL3	87	83.784	Pan_paniscus
ENSOMEG00000015066	rabl3	100	86.864	ENSPPRG00000016325	RABL3	100	86.864	Panthera_pardus
ENSOMEG00000015066	rabl3	100	86.864	ENSPTIG00000018021	RABL3	100	86.864	Panthera_tigris_altaica
ENSOMEG00000015066	rabl3	100	85.169	ENSPTRG00000015272	RABL3	100	85.169	Pan_troglodytes
ENSOMEG00000015066	rabl3	100	85.593	ENSPANG00000001339	RABL3	100	85.593	Papio_anubis
ENSOMEG00000015066	rabl3	100	92.704	ENSPKIG00000007818	rabl3	100	92.704	Paramormyrops_kingsleyae
ENSOMEG00000015066	rabl3	100	86.441	ENSPSIG00000011358	RABL3	100	86.441	Pelodiscus_sinensis
ENSOMEG00000015066	rabl3	100	95.495	ENSPMGG00000015794	rabl3	100	95.495	Periophthalmus_magnuspinnatus
ENSOMEG00000015066	rabl3	100	83.051	ENSPEMG00000016913	Rabl3	100	83.051	Peromyscus_maniculatus_bairdii
ENSOMEG00000015066	rabl3	100	85.593	ENSPCIG00000018922	RABL3	100	85.593	Phascolarctos_cinereus
ENSOMEG00000015066	rabl3	100	93.562	ENSPFOG00000008586	rabl3	100	93.562	Poecilia_formosa
ENSOMEG00000015066	rabl3	100	93.562	ENSPLAG00000014482	rabl3	100	93.562	Poecilia_latipinna
ENSOMEG00000015066	rabl3	100	93.562	ENSPMEG00000002295	rabl3	100	93.562	Poecilia_mexicana
ENSOMEG00000015066	rabl3	100	93.133	ENSPREG00000014815	rabl3	100	93.133	Poecilia_reticulata
ENSOMEG00000015066	rabl3	100	85.593	ENSPPYG00000013501	RABL3	100	85.593	Pongo_abelii
ENSOMEG00000015066	rabl3	100	86.864	ENSPCOG00000022230	RABL3	100	86.864	Propithecus_coquereli
ENSOMEG00000015066	rabl3	100	85.169	ENSPVAG00000010013	RABL3	100	85.169	Pteropus_vampyrus
ENSOMEG00000015066	rabl3	100	96.996	ENSPNYG00000006659	rabl3	100	96.996	Pundamilia_nyererei
ENSOMEG00000015066	rabl3	100	94.850	ENSPNAG00000000748	rabl3	100	94.850	Pygocentrus_nattereri
ENSOMEG00000015066	rabl3	100	82.627	ENSRNOG00000026085	Rabl3	100	82.627	Rattus_norvegicus
ENSOMEG00000015066	rabl3	100	85.593	ENSRBIG00000040941	RABL3	100	85.593	Rhinopithecus_bieti
ENSOMEG00000015066	rabl3	100	85.593	ENSRROG00000043745	RABL3	100	85.593	Rhinopithecus_roxellana
ENSOMEG00000015066	rabl3	100	87.288	ENSSBOG00000004022	RABL3	100	87.288	Saimiri_boliviensis_boliviensis
ENSOMEG00000015066	rabl3	100	84.746	ENSSHAG00000012233	RABL3	100	84.746	Sarcophilus_harrisii
ENSOMEG00000015066	rabl3	100	92.704	ENSSFOG00015010171	rabl3	100	92.704	Scleropages_formosus
ENSOMEG00000015066	rabl3	100	94.872	ENSSMAG00000002403	rabl3	100	94.872	Scophthalmus_maximus
ENSOMEG00000015066	rabl3	100	96.137	ENSSDUG00000012078	rabl3	100	96.137	Seriola_dumerili
ENSOMEG00000015066	rabl3	100	96.567	ENSSLDG00000021899	rabl3	100	96.567	Seriola_lalandi_dorsalis
ENSOMEG00000015066	rabl3	100	86.441	ENSSARG00000008316	RABL3	100	86.441	Sorex_araneus
ENSOMEG00000015066	rabl3	100	86.864	ENSSPUG00000017490	RABL3	100	86.864	Sphenodon_punctatus
ENSOMEG00000015066	rabl3	100	96.567	ENSSPAG00000011642	rabl3	100	96.567	Stegastes_partitus
ENSOMEG00000015066	rabl3	100	87.288	ENSSSCG00000035258	RABL3	100	87.288	Sus_scrofa
ENSOMEG00000015066	rabl3	100	85.169	ENSTGUG00000013374	RABL3	100	85.169	Taeniopygia_guttata
ENSOMEG00000015066	rabl3	84	91.579	ENSTRUG00000007846	RABL3	100	96.094	Takifugu_rubripes
ENSOMEG00000015066	rabl3	100	73.305	ENSTBEG00000005153	RABL3	100	73.305	Tupaia_belangeri
ENSOMEG00000015066	rabl3	100	86.017	ENSUAMG00000005299	RABL3	100	86.017	Ursus_americanus
ENSOMEG00000015066	rabl3	100	86.017	ENSUMAG00000025256	RABL3	89	86.017	Ursus_maritimus
ENSOMEG00000015066	rabl3	100	87.288	ENSVPAG00000003776	RABL3	100	87.288	Vicugna_pacos
ENSOMEG00000015066	rabl3	100	86.864	ENSVVUG00000022300	RABL3	89	86.864	Vulpes_vulpes
ENSOMEG00000015066	rabl3	100	93.133	ENSXMAG00000003244	rabl3	100	93.133	Xiphophorus_maculatus