EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOMEG00000015124 (Gene tree)
Gene ID: 112152180
Gene Symbol: cnot1
Alias: -
Full Name: CCR4-NOT transcription complex%2C subunit 1
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 20852 bases
Position: chrNVQA01000016.1:7563463-7584314
Accession: ZDB-GENE-040915-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000030693	Not1	PF04054.15	6.1e-122	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000021290	-	6978	-	ENSOMEP00000030693	2325 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000015124's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000015124's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000015124	cnot1	100	88.641	ENSG00000125107	CNOT1	100	100.000	Homo_sapiens
ENSOMEG00000015124	cnot1	100	91.047	ENSAPOG00000005042	cnot1	100	91.509	Acanthochromis_polyacanthus
ENSOMEG00000015124	cnot1	100	88.683	ENSAMEG00000017298	CNOT1	100	88.394	Ailuropoda_melanoleuca
ENSOMEG00000015124	cnot1	90	93.128	ENSACIG00000016003	cnot1	99	93.221	Amphilophus_citrinellus
ENSOMEG00000015124	cnot1	100	92.602	ENSAPEG00000022342	cnot1	100	93.148	Amphiprion_percula
ENSOMEG00000015124	cnot1	100	90.840	ENSATEG00000012892	cnot1	100	91.261	Anabas_testudineus
ENSOMEG00000015124	cnot1	100	87.977	ENSAPLG00000007162	CNOT1	100	87.306	Anas_platyrhynchos
ENSOMEG00000015124	cnot1	92	88.581	ENSACAG00000001602	CNOT1	98	88.581	Anolis_carolinensis
ENSOMEG00000015124	cnot1	100	88.979	ENSANAG00000038198	CNOT1	100	88.684	Aotus_nancymaae
ENSOMEG00000015124	cnot1	100	91.237	ENSACLG00000014234	cnot1	100	90.871	Astatotilapia_calliptera
ENSOMEG00000015124	cnot1	100	91.544	ENSAMXG00000013170	cnot1	100	91.544	Astyanax_mexicanus
ENSOMEG00000015124	cnot1	100	88.497	ENSBTAG00000020782	CNOT1	100	88.208	Bos_taurus
ENSOMEG00000015124	cnot1	78	39.740	WBGene00002845	let-711	81	40.296	Caenorhabditis_elegans
ENSOMEG00000015124	cnot1	100	88.329	ENSCJAG00000011318	CNOT1	100	88.040	Callithrix_jacchus
ENSOMEG00000015124	cnot1	100	88.060	ENSCAFG00000008426	CNOT1	100	87.772	Canis_familiaris
ENSOMEG00000015124	cnot1	100	90.266	ENSCAFG00020010156	CNOT1	100	89.970	Canis_lupus_dingo
ENSOMEG00000015124	cnot1	100	88.497	ENSCHIG00000010452	CNOT1	100	88.208	Capra_hircus
ENSOMEG00000015124	cnot1	100	90.395	ENSTSYG00000006888	CNOT1	100	90.099	Carlito_syrichta
ENSOMEG00000015124	cnot1	100	86.721	ENSCPOG00000013026	CNOT1	100	86.168	Cavia_porcellus
ENSOMEG00000015124	cnot1	100	88.765	ENSCCAG00000026333	CNOT1	100	88.470	Cebus_capucinus
ENSOMEG00000015124	cnot1	100	90.352	ENSCATG00000032625	CNOT1	100	90.056	Cercocebus_atys
ENSOMEG00000015124	cnot1	100	88.413	ENSCLAG00000006289	CNOT1	100	88.124	Chinchilla_lanigera
ENSOMEG00000015124	cnot1	100	88.413	ENSCSAG00000004731	CNOT1	100	88.124	Chlorocebus_sabaeus
ENSOMEG00000015124	cnot1	80	97.727	ENSCHOG00000009712	CNOT1	83	96.296	Choloepus_hoffmanni
ENSOMEG00000015124	cnot1	98	88.330	ENSCPBG00000026222	CNOT1	99	88.024	Chrysemys_picta_bellii
ENSOMEG00000015124	cnot1	100	56.858	ENSCING00000009149	-	100	56.549	Ciona_intestinalis
ENSOMEG00000015124	cnot1	92	58.649	ENSCSAVG00000002414	-	93	79.470	Ciona_savignyi
ENSOMEG00000015124	cnot1	100	88.728	ENSCANG00000040534	CNOT1	100	88.434	Colobus_angolensis_palliatus
ENSOMEG00000015124	cnot1	100	89.897	ENSCGRG00001016365	Cnot1	100	89.918	Cricetulus_griseus_chok1gshd
ENSOMEG00000015124	cnot1	100	89.897	ENSCGRG00000001714	Cnot1	100	89.918	Cricetulus_griseus_crigri
ENSOMEG00000015124	cnot1	100	89.445	ENSCVAG00000018930	cnot1	100	89.403	Cyprinodon_variegatus
ENSOMEG00000015124	cnot1	100	90.566	ENSDARG00000004174	cnot1	100	90.776	Danio_rerio
ENSOMEG00000015124	cnot1	100	86.446	ENSDNOG00000013250	CNOT1	100	86.104	Dasypus_novemcinctus
ENSOMEG00000015124	cnot1	99	51.060	FBgn0085436	Not1	96	47.226	Drosophila_melanogaster
ENSOMEG00000015124	cnot1	84	87.801	ENSETEG00000012806	CNOT1	84	87.801	Echinops_telfairi
ENSOMEG00000015124	cnot1	81	81.180	ENSEBUG00000011534	cnot1	95	81.180	Eptatretus_burgeri
ENSOMEG00000015124	cnot1	100	85.140	ENSEASG00005005819	CNOT1	100	88.531	Equus_asinus_asinus
ENSOMEG00000015124	cnot1	100	88.413	ENSECAG00000009889	CNOT1	100	88.124	Equus_caballus
ENSOMEG00000015124	cnot1	90	88.690	ENSEEUG00000006015	CNOT1	90	87.841	Erinaceus_europaeus
ENSOMEG00000015124	cnot1	100	91.222	ENSELUG00000014085	cnot1	100	91.222	Esox_lucius
ENSOMEG00000015124	cnot1	100	88.196	ENSFCAG00000025155	CNOT1	100	87.908	Felis_catus
ENSOMEG00000015124	cnot1	100	88.250	ENSFALG00000007285	CNOT1	100	87.579	Ficedula_albicollis
ENSOMEG00000015124	cnot1	100	90.309	ENSFDAG00000013399	CNOT1	100	90.013	Fukomys_damarensis
ENSOMEG00000015124	cnot1	100	92.363	ENSFHEG00000020574	cnot1	100	92.782	Fundulus_heteroclitus
ENSOMEG00000015124	cnot1	92	93.513	ENSGMOG00000012864	cnot1	100	93.559	Gadus_morhua
ENSOMEG00000015124	cnot1	100	87.998	ENSGALG00000002301	CNOT1	100	87.327	Gallus_gallus
ENSOMEG00000015124	cnot1	100	91.047	ENSGAFG00000015005	cnot1	100	91.299	Gambusia_affinis
ENSOMEG00000015124	cnot1	92	94.175	ENSGACG00000002606	cnot1	99	94.859	Gasterosteus_aculeatus
ENSOMEG00000015124	cnot1	100	88.292	ENSGAGG00000022646	CNOT1	100	88.290	Gopherus_agassizii
ENSOMEG00000015124	cnot1	100	88.455	ENSGGOG00000009547	CNOT1	100	88.166	Gorilla_gorilla
ENSOMEG00000015124	cnot1	100	91.321	ENSHBUG00000001729	cnot1	100	90.955	Haplochromis_burtoni
ENSOMEG00000015124	cnot1	100	90.309	ENSHGLG00000014322	CNOT1	100	90.056	Heterocephalus_glaber_female
ENSOMEG00000015124	cnot1	100	91.848	ENSHCOG00000006501	cnot1	100	92.295	Hippocampus_comes
ENSOMEG00000015124	cnot1	100	89.882	ENSIPUG00000011915	cnot1	100	89.882	Ictalurus_punctatus
ENSOMEG00000015124	cnot1	100	90.094	ENSSTOG00000005490	CNOT1	100	89.927	Ictidomys_tridecemlineatus
ENSOMEG00000015124	cnot1	100	89.751	ENSJJAG00000000633	Cnot1	100	89.456	Jaculus_jaculus
ENSOMEG00000015124	cnot1	100	93.462	ENSKMAG00000006149	cnot1	100	93.462	Kryptolebias_marmoratus
ENSOMEG00000015124	cnot1	95	93.447	ENSLBEG00000004740	cnot1	100	93.162	Labrus_bergylta
ENSOMEG00000015124	cnot1	100	88.875	ENSLACG00000010869	CNOT1	100	88.114	Latimeria_chalumnae
ENSOMEG00000015124	cnot1	100	91.447	ENSLOCG00000006324	cnot1	100	90.943	Lepisosteus_oculatus
ENSOMEG00000015124	cnot1	100	88.297	ENSLAFG00000000098	CNOT1	100	88.008	Loxodonta_africana
ENSOMEG00000015124	cnot1	100	90.352	ENSMFAG00000035888	CNOT1	100	90.056	Macaca_fascicularis
ENSOMEG00000015124	cnot1	100	90.309	ENSMMUG00000014625	CNOT1	94	98.545	Macaca_mulatta
ENSOMEG00000015124	cnot1	100	88.079	ENSMNEG00000031820	CNOT1	100	87.591	Macaca_nemestrina
ENSOMEG00000015124	cnot1	100	89.237	ENSMLEG00000040933	CNOT1	100	88.941	Mandrillus_leucophaeus
ENSOMEG00000015124	cnot1	100	90.584	ENSMAMG00000016524	cnot1	100	91.005	Mastacembelus_armatus
ENSOMEG00000015124	cnot1	100	88.203	ENSMZEG00005016210	cnot1	100	88.218	Maylandia_zebra
ENSOMEG00000015124	cnot1	100	88.267	ENSMGAG00000001908	CNOT1	100	87.595	Meleagris_gallopavo
ENSOMEG00000015124	cnot1	100	90.305	ENSMICG00000007071	CNOT1	100	90.141	Microcebus_murinus
ENSOMEG00000015124	cnot1	100	90.094	ENSMOCG00000017969	Cnot1	100	89.841	Microtus_ochrogaster
ENSOMEG00000015124	cnot1	100	90.318	ENSMMOG00000019134	cnot1	100	90.658	Mola_mola
ENSOMEG00000015124	cnot1	100	88.250	ENSMODG00000014199	CNOT1	100	87.961	Monodelphis_domestica
ENSOMEG00000015124	cnot1	100	91.674	ENSMALG00000008645	cnot1	100	91.674	Monopterus_albus
ENSOMEG00000015124	cnot1	95	95.238	MGP_CAROLIEiJ_G0031430	Cnot1	92	95.238	Mus_caroli
ENSOMEG00000015124	cnot1	100	90.137	ENSMUSG00000036550	Cnot1	100	89.884	Mus_musculus
ENSOMEG00000015124	cnot1	100	90.137	MGP_PahariEiJ_G0023028	Cnot1	100	89.884	Mus_pahari
ENSOMEG00000015124	cnot1	100	90.137	MGP_SPRETEiJ_G0032549	Cnot1	100	89.884	Mus_spretus
ENSOMEG00000015124	cnot1	100	88.455	ENSMPUG00000004830	CNOT1	100	88.166	Mustela_putorius_furo
ENSOMEG00000015124	cnot1	100	88.077	ENSMLUG00000003728	CNOT1	100	87.830	Myotis_lucifugus
ENSOMEG00000015124	cnot1	100	90.180	ENSNGAG00000018628	Cnot1	100	89.884	Nannospalax_galili
ENSOMEG00000015124	cnot1	97	87.261	ENSNBRG00000019358	cnot1	100	86.628	Neolamprologus_brichardi
ENSOMEG00000015124	cnot1	100	90.352	ENSNLEG00000003566	CNOT1	100	90.056	Nomascus_leucogenys
ENSOMEG00000015124	cnot1	86	90.604	ENSMEUG00000006145	CNOT1	85	90.604	Notamacropus_eugenii
ENSOMEG00000015124	cnot1	85	96.117	ENSOPRG00000005604	CNOT1	86	96.117	Ochotona_princeps
ENSOMEG00000015124	cnot1	100	90.266	ENSODEG00000016337	CNOT1	100	90.013	Octodon_degus
ENSOMEG00000015124	cnot1	100	92.914	ENSONIG00000007358	cnot1	100	92.672	Oreochromis_niloticus
ENSOMEG00000015124	cnot1	92	89.638	ENSOANG00000012109	CNOT1	99	89.131	Ornithorhynchus_anatinus
ENSOMEG00000015124	cnot1	100	88.455	ENSOCUG00000006911	CNOT1	100	88.124	Oryctolagus_cuniculus
ENSOMEG00000015124	cnot1	100	96.804	ENSORLG00000013734	cnot1	100	96.804	Oryzias_latipes
ENSOMEG00000015124	cnot1	100	98.500	ENSORLG00020017012	cnot1	100	98.500	Oryzias_latipes_hni
ENSOMEG00000015124	cnot1	100	98.371	ENSORLG00015007091	cnot1	100	98.371	Oryzias_latipes_hsok
ENSOMEG00000015124	cnot1	100	88.497	ENSOGAG00000000543	CNOT1	100	88.240	Otolemur_garnettii
ENSOMEG00000015124	cnot1	100	88.497	ENSOARG00000001567	CNOT1	100	88.208	Ovis_aries
ENSOMEG00000015124	cnot1	100	90.352	ENSPPAG00000022013	CNOT1	100	90.056	Pan_paniscus
ENSOMEG00000015124	cnot1	100	88.455	ENSPPRG00000004867	CNOT1	100	88.166	Panthera_pardus
ENSOMEG00000015124	cnot1	100	88.455	ENSPTIG00000012589	CNOT1	100	88.166	Panthera_tigris_altaica
ENSOMEG00000015124	cnot1	100	90.352	ENSPTRG00000008183	CNOT1	100	90.056	Pan_troglodytes
ENSOMEG00000015124	cnot1	100	87.217	ENSPANG00000020901	CNOT1	100	86.923	Papio_anubis
ENSOMEG00000015124	cnot1	100	91.230	ENSPKIG00000023538	CNOT1	100	90.894	Paramormyrops_kingsleyae
ENSOMEG00000015124	cnot1	99	84.763	ENSPKIG00000002914	CNOT1	99	84.686	Paramormyrops_kingsleyae
ENSOMEG00000015124	cnot1	100	88.208	ENSPSIG00000005499	CNOT1	100	87.579	Pelodiscus_sinensis
ENSOMEG00000015124	cnot1	100	77.806	ENSPMAG00000009381	cnot1	100	77.731	Petromyzon_marinus
ENSOMEG00000015124	cnot1	100	90.266	ENSPCIG00000007343	CNOT1	100	89.884	Phascolarctos_cinereus
ENSOMEG00000015124	cnot1	99	94.176	ENSPFOG00000003497	cnot1	98	94.090	Poecilia_formosa
ENSOMEG00000015124	cnot1	95	92.509	ENSPLAG00000014018	cnot1	100	92.338	Poecilia_latipinna
ENSOMEG00000015124	cnot1	95	90.636	ENSPMEG00000005868	cnot1	100	90.465	Poecilia_mexicana
ENSOMEG00000015124	cnot1	95	92.679	ENSPREG00000018793	cnot1	100	92.509	Poecilia_reticulata
ENSOMEG00000015124	cnot1	100	88.455	ENSPPYG00000007410	CNOT1	100	88.166	Pongo_abelii
ENSOMEG00000015124	cnot1	89	86.525	ENSPCAG00000003241	CNOT1	90	85.605	Procavia_capensis
ENSOMEG00000015124	cnot1	100	90.262	ENSPCOG00000027139	CNOT1	100	90.099	Propithecus_coquereli
ENSOMEG00000015124	cnot1	100	85.642	ENSPVAG00000004243	CNOT1	100	85.606	Pteropus_vampyrus
ENSOMEG00000015124	cnot1	100	89.987	ENSPNYG00000012919	cnot1	100	90.000	Pundamilia_nyererei
ENSOMEG00000015124	cnot1	100	90.572	ENSPNAG00000000246	cnot1	100	90.362	Pygocentrus_nattereri
ENSOMEG00000015124	cnot1	100	88.161	ENSRNOG00000012271	Cnot1	100	87.914	Rattus_norvegicus
ENSOMEG00000015124	cnot1	100	88.589	ENSRBIG00000044598	CNOT1	100	88.293	Rhinopithecus_bieti
ENSOMEG00000015124	cnot1	100	90.352	ENSRROG00000000906	CNOT1	100	90.056	Rhinopithecus_roxellana
ENSOMEG00000015124	cnot1	55	30.846	YCR093W	CDC39	58	34.074	Saccharomyces_cerevisiae
ENSOMEG00000015124	cnot1	100	86.313	ENSSBOG00000029155	CNOT1	100	86.020	Saimiri_boliviensis_boliviensis
ENSOMEG00000015124	cnot1	100	88.287	ENSSHAG00000012187	CNOT1	100	87.998	Sarcophilus_harrisii
ENSOMEG00000015124	cnot1	100	93.325	ENSSFOG00015017614	cnot1	100	92.811	Scleropages_formosus
ENSOMEG00000015124	cnot1	100	93.192	ENSSMAG00000013844	cnot1	100	93.275	Scophthalmus_maximus
ENSOMEG00000015124	cnot1	100	90.806	ENSSDUG00000021491	cnot1	100	91.226	Seriola_dumerili
ENSOMEG00000015124	cnot1	100	94.103	ENSSLDG00000014816	cnot1	100	94.103	Seriola_lalandi_dorsalis
ENSOMEG00000015124	cnot1	85	97.400	ENSSARG00000000762	CNOT1	88	97.400	Sorex_araneus
ENSOMEG00000015124	cnot1	100	92.479	ENSSPAG00000018802	cnot1	100	92.983	Stegastes_partitus
ENSOMEG00000015124	cnot1	100	88.287	ENSSSCG00000002799	CNOT1	100	87.998	Sus_scrofa
ENSOMEG00000015124	cnot1	100	88.097	ENSTGUG00000005919	CNOT1	100	87.427	Taeniopygia_guttata
ENSOMEG00000015124	cnot1	100	90.981	ENSTNIG00000018706	cnot1	100	91.023	Tetraodon_nigroviridis
ENSOMEG00000015124	cnot1	80	97.887	ENSTBEG00000000720	CNOT1	80	97.887	Tupaia_belangeri
ENSOMEG00000015124	cnot1	93	92.453	ENSTTRG00000008460	CNOT1	93	92.453	Tursiops_truncatus
ENSOMEG00000015124	cnot1	100	88.455	ENSUAMG00000009251	CNOT1	100	88.166	Ursus_americanus
ENSOMEG00000015124	cnot1	100	88.455	ENSUMAG00000021291	CNOT1	100	88.166	Ursus_maritimus
ENSOMEG00000015124	cnot1	97	86.876	ENSVPAG00000008846	CNOT1	97	86.876	Vicugna_pacos
ENSOMEG00000015124	cnot1	100	88.722	ENSVVUG00000024037	CNOT1	100	88.427	Vulpes_vulpes
ENSOMEG00000015124	cnot1	100	83.711	ENSXETG00000015900	cnot1	100	83.019	Xenopus_tropicalis
ENSOMEG00000015124	cnot1	100	91.173	ENSXCOG00000013552	cnot1	100	91.425	Xiphophorus_couchianus
ENSOMEG00000015124	cnot1	100	91.215	ENSXMAG00000006031	cnot1	100	91.467	Xiphophorus_maculatus