EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000015459 (Gene tree)
Gene ID: 112162297
Gene Symbol: -
Alias: -
Full Name: poly(rC)-binding protein 3-like
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 16128 bases
Position: chrNVQA01000028.1:28598291-28614418
Accession: 112162297
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000030945	KH_1	PF00013.29	1.6e-53	1	3
ENSOMEP00000030945	KH_1	PF00013.29	1.6e-53	2	3
ENSOMEP00000030945	KH_1	PF00013.29	1.6e-53	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000033360	-	2590	XM_024298101	ENSOMEP00000030945	434 (aa)	XP_024153869	UPI000CF7D158

Gene Model

Click here to download ENSOMEG00000015459's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000015459's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000015459	-	100	55.556	ENSOMEG00000003516	-	96	53.797
ENSOMEG00000015459	-	74	32.911	ENSOMEG00000017916	igf2bp3	65	32.911
ENSOMEG00000015459	-	71	37.647	ENSOMEG00000004190	fubp3	68	38.356
ENSOMEG00000015459	-	52	31.707	ENSOMEG00000007725	-	59	31.707
ENSOMEG00000015459	-	55	47.059	ENSOMEG00000023618	hnrnpk	54	47.059
ENSOMEG00000015459	-	71	72.078	ENSOMEG00000019014	PCBP2	98	69.508
ENSOMEG00000015459	-	66	32.886	ENSOMEG00000021943	fubp1	63	32.886
ENSOMEG00000015459	-	72	74.359	ENSOMEG00000020162	-	97	73.651
ENSOMEG00000015459	-	57	47.761	ENSOMEG00000010595	hnrpkl	60	47.059
ENSOMEG00000015459	-	69	72.281	ENSOMEG00000020811	pcbp3	97	72.281
ENSOMEG00000015459	-	71	69.108	ENSOMEG00000005759	pcbp2	95	69.108
ENSOMEG00000015459	-	99	55.921	ENSOMEG00000011545	-	97	55.921
ENSOMEG00000015459	-	73	35.211	ENSOMEG00000001908	igf2bp2b	63	34.021
ENSOMEG00000015459	-	72	32.394	ENSOMEG00000012285	igf2bp1	64	30.625

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000015459	-	72	76.358	ENSG00000183570	PCBP3	97	69.714	Homo_sapiens
ENSOMEG00000015459	-	73	96.203	ENSAPOG00000023735	zgc:110045	97	96.203	Acanthochromis_polyacanthus
ENSOMEG00000015459	-	72	88.644	ENSACIG00000002577	zgc:110045	99	92.627	Amphilophus_citrinellus
ENSOMEG00000015459	-	100	93.548	ENSAPEG00000000729	zgc:110045	100	93.548	Amphiprion_percula
ENSOMEG00000015459	-	97	86.377	ENSATEG00000011191	zgc:110045	100	86.377	Anabas_testudineus
ENSOMEG00000015459	-	100	93.548	ENSACLG00000019285	zgc:110045	100	93.548	Astatotilapia_calliptera
ENSOMEG00000015459	-	72	76.358	ENSBTAG00000030775	PCBP3	97	68.571	Bos_taurus
ENSOMEG00000015459	-	72	71.988	ENSCAFG00000011907	PCBP3	88	71.988	Canis_familiaris
ENSOMEG00000015459	-	72	69.369	ENSCHIG00000015841	PCBP3	87	69.369	Capra_hircus
ENSOMEG00000015459	-	52	67.078	ENSTSYG00000005254	PCBP3	95	67.078	Carlito_syrichta
ENSOMEG00000015459	-	72	55.319	ENSCAPG00000006767	PCBP3	81	55.319	Cavia_aperea
ENSOMEG00000015459	-	72	71.772	ENSCPOG00000003648	PCBP3	89	71.772	Cavia_porcellus
ENSOMEG00000015459	-	72	76.358	ENSCCAG00000024561	PCBP3	99	66.957	Cebus_capucinus
ENSOMEG00000015459	-	72	76.358	ENSCATG00000038419	PCBP3	97	67.552	Cercocebus_atys
ENSOMEG00000015459	-	72	71.772	ENSCLAG00000006667	PCBP3	88	71.772	Chinchilla_lanigera
ENSOMEG00000015459	-	72	76.358	ENSCANG00000026757	PCBP3	97	68.000	Colobus_angolensis_palliatus
ENSOMEG00000015459	-	72	71.772	ENSCGRG00001006836	Pcbp3	88	71.772	Cricetulus_griseus_chok1gshd
ENSOMEG00000015459	-	72	71.772	ENSCGRG00000001837	Pcbp3	88	71.772	Cricetulus_griseus_crigri
ENSOMEG00000015459	-	100	91.705	ENSCSEG00000010020	zgc:110045	100	91.705	Cynoglossus_semilaevis
ENSOMEG00000015459	-	50	80.184	ENSDARG00000057141	zgc:110045	97	80.184	Danio_rerio
ENSOMEG00000015459	-	72	71.772	ENSDNOG00000049518	PCBP3	89	71.772	Dasypus_novemcinctus
ENSOMEG00000015459	-	54	66.525	ENSEBUG00000009697	zgc:110045	99	66.667	Eptatretus_burgeri
ENSOMEG00000015459	-	72	76.038	ENSEASG00005007068	PCBP3	88	76.038	Equus_asinus_asinus
ENSOMEG00000015459	-	72	76.038	ENSECAG00000012413	PCBP3	88	76.038	Equus_caballus
ENSOMEG00000015459	-	100	82.380	ENSELUG00000019784	zgc:110045	100	81.465	Esox_lucius
ENSOMEG00000015459	-	72	76.358	ENSFCAG00000014812	PCBP3	88	76.358	Felis_catus
ENSOMEG00000015459	-	72	76.038	ENSFDAG00000009117	PCBP3	88	76.038	Fukomys_damarensis
ENSOMEG00000015459	-	72	81.361	ENSFHEG00000018838	-	92	92.537	Fundulus_heteroclitus
ENSOMEG00000015459	-	70	90.554	ENSGMOG00000005953	zgc:110045	93	90.554	Gadus_morhua
ENSOMEG00000015459	-	59	83.163	ENSGAFG00000017860	-	100	83.163	Gambusia_affinis
ENSOMEG00000015459	-	50	95.872	ENSGAFG00000017864	zgc:110045	96	95.872	Gambusia_affinis
ENSOMEG00000015459	-	72	93.949	ENSGACG00000003044	zgc:110045	97	93.949	Gasterosteus_aculeatus
ENSOMEG00000015459	-	72	76.358	ENSGGOG00000003683	PCBP3	88	76.358	Gorilla_gorilla
ENSOMEG00000015459	-	73	96.203	ENSHBUG00000012495	zgc:110045	97	96.203	Haplochromis_burtoni
ENSOMEG00000015459	-	72	71.772	ENSHGLG00000018620	PCBP3	89	71.772	Heterocephalus_glaber_female
ENSOMEG00000015459	-	72	71.772	ENSHGLG00100013590	PCBP3	89	71.772	Heterocephalus_glaber_male
ENSOMEG00000015459	-	71	88.991	ENSHCOG00000000818	zgc:110045	99	88.991	Hippocampus_comes
ENSOMEG00000015459	-	50	76.606	ENSIPUG00000003932	zgc:110045	81	76.606	Ictalurus_punctatus
ENSOMEG00000015459	-	72	71.772	ENSSTOG00000007178	PCBP3	88	71.772	Ictidomys_tridecemlineatus
ENSOMEG00000015459	-	72	72.072	ENSJJAG00000021192	Pcbp3	88	72.072	Jaculus_jaculus
ENSOMEG00000015459	-	96	79.420	ENSKMAG00000016179	-	95	97.436	Kryptolebias_marmoratus
ENSOMEG00000015459	-	73	86.787	ENSLBEG00000023074	zgc:110045	97	86.787	Labrus_bergylta
ENSOMEG00000015459	-	69	73.932	ENSLAFG00000020835	PCBP3	96	73.932	Loxodonta_africana
ENSOMEG00000015459	-	72	76.358	ENSMFAG00000034574	PCBP3	97	67.552	Macaca_fascicularis
ENSOMEG00000015459	-	72	76.358	ENSMMUG00000003825	PCBP3	99	70.588	Macaca_mulatta
ENSOMEG00000015459	-	72	76.358	ENSMNEG00000035551	PCBP3	97	76.358	Macaca_nemestrina
ENSOMEG00000015459	-	72	76.358	ENSMLEG00000038785	PCBP3	97	68.634	Mandrillus_leucophaeus
ENSOMEG00000015459	-	72	95.223	ENSMAMG00000014389	zgc:110045	99	95.223	Mastacembelus_armatus
ENSOMEG00000015459	-	100	93.548	ENSMZEG00005011785	zgc:110045	100	93.548	Maylandia_zebra
ENSOMEG00000015459	-	71	72.340	ENSMAUG00000007036	Pcbp3	87	72.340	Mesocricetus_auratus
ENSOMEG00000015459	-	72	76.038	ENSMICG00000012679	PCBP3	88	76.038	Microcebus_murinus
ENSOMEG00000015459	-	72	71.772	ENSMOCG00000016127	Pcbp3	88	71.772	Microtus_ochrogaster
ENSOMEG00000015459	-	59	85.864	ENSMMOG00000008398	-	100	85.864	Mola_mola
ENSOMEG00000015459	-	72	71.988	MGP_CAROLIEiJ_G0015475	Pcbp3	99	72.489	Mus_caroli
ENSOMEG00000015459	-	72	71.988	ENSMUSG00000001120	Pcbp3	99	72.489	Mus_musculus
ENSOMEG00000015459	-	72	71.988	MGP_PahariEiJ_G0030889	Pcbp3	99	72.489	Mus_pahari
ENSOMEG00000015459	-	72	71.988	MGP_SPRETEiJ_G0016288	Pcbp3	99	72.489	Mus_spretus
ENSOMEG00000015459	-	72	71.772	ENSMLUG00000003074	PCBP3	88	71.772	Myotis_lucifugus
ENSOMEG00000015459	-	72	71.772	ENSNGAG00000005416	Pcbp3	88	71.772	Nannospalax_galili
ENSOMEG00000015459	-	100	94.009	ENSNBRG00000017646	zgc:110045	100	94.009	Neolamprologus_brichardi
ENSOMEG00000015459	-	72	76.358	ENSNLEG00000002639	PCBP3	88	76.358	Nomascus_leucogenys
ENSOMEG00000015459	-	72	67.429	ENSMEUG00000012960	PCBP3	97	67.429	Notamacropus_eugenii
ENSOMEG00000015459	-	72	69.369	ENSODEG00000012873	PCBP3	89	69.369	Octodon_degus
ENSOMEG00000015459	-	100	89.401	ENSONIG00000010370	zgc:110045	100	89.171	Oreochromis_niloticus
ENSOMEG00000015459	-	55	72.266	ENSOANG00000006265	PCBP3	90	72.266	Ornithorhynchus_anatinus
ENSOMEG00000015459	-	100	97.005	ENSORLG00000014385	-	100	97.005	Oryzias_latipes
ENSOMEG00000015459	-	100	95.161	ENSORLG00020003139	zgc:110045	100	93.779	Oryzias_latipes_hni
ENSOMEG00000015459	-	72	69.486	ENSOARG00000012704	PCBP3	88	69.486	Ovis_aries
ENSOMEG00000015459	-	72	76.358	ENSPPAG00000021940	PCBP3	88	76.358	Pan_paniscus
ENSOMEG00000015459	-	72	76.358	ENSPPRG00000003933	PCBP3	88	76.358	Panthera_pardus
ENSOMEG00000015459	-	72	62.342	ENSPTIG00000012038	PCBP3	87	62.939	Panthera_tigris_altaica
ENSOMEG00000015459	-	72	56.230	ENSPTRG00000014010	PCBP3	97	51.705	Pan_troglodytes
ENSOMEG00000015459	-	72	76.358	ENSPANG00000023631	PCBP3	97	67.552	Papio_anubis
ENSOMEG00000015459	-	50	56.682	ENSPMGG00000022531	-	96	56.682	Periophthalmus_magnuspinnatus
ENSOMEG00000015459	-	100	75.057	ENSPMGG00000021588	-	99	75.057	Periophthalmus_magnuspinnatus
ENSOMEG00000015459	-	72	71.772	ENSPEMG00000000587	Pcbp3	88	71.772	Peromyscus_maniculatus_bairdii
ENSOMEG00000015459	-	76	92.470	ENSPFOG00000002348	zgc:110045	100	92.470	Poecilia_formosa
ENSOMEG00000015459	-	50	91.743	ENSPLAG00000017488	zgc:110045	96	91.743	Poecilia_latipinna
ENSOMEG00000015459	-	73	90.794	ENSPMEG00000012762	zgc:110045	96	95.872	Poecilia_mexicana
ENSOMEG00000015459	-	100	91.244	ENSPREG00000001797	zgc:110045	95	96.744	Poecilia_reticulata
ENSOMEG00000015459	-	57	68.582	ENSPPYG00000011525	-	94	68.582	Pongo_abelii
ENSOMEG00000015459	-	70	59.412	ENSPCAG00000001454	PCBP3	98	59.412	Procavia_capensis
ENSOMEG00000015459	-	72	76.038	ENSPCOG00000013797	PCBP3	88	76.038	Propithecus_coquereli
ENSOMEG00000015459	-	56	76.471	ENSPVAG00000000832	PCBP3	73	76.471	Pteropus_vampyrus
ENSOMEG00000015459	-	50	92.627	ENSPNYG00000004637	zgc:110045	99	92.627	Pundamilia_nyererei
ENSOMEG00000015459	-	60	88.265	ENSPNYG00000004656	-	98	88.265	Pundamilia_nyererei
ENSOMEG00000015459	-	50	79.724	ENSPNAG00000004501	zgc:110045	97	79.724	Pygocentrus_nattereri
ENSOMEG00000015459	-	72	76.358	ENSRROG00000034567	PCBP3	88	76.358	Rhinopithecus_roxellana
ENSOMEG00000015459	-	72	76.358	ENSSBOG00000005789	PCBP3	88	76.358	Saimiri_boliviensis_boliviensis
ENSOMEG00000015459	-	100	93.088	ENSSMAG00000013541	zgc:110045	100	93.088	Scophthalmus_maximus
ENSOMEG00000015459	-	97	92.174	ENSSDUG00000019371	zgc:110045	100	92.174	Seriola_dumerili
ENSOMEG00000015459	-	100	94.009	ENSSLDG00000021064	zgc:110045	100	94.009	Seriola_lalandi_dorsalis
ENSOMEG00000015459	-	73	96.519	ENSSPAG00000000563	zgc:110045	97	96.519	Stegastes_partitus
ENSOMEG00000015459	-	72	76.358	ENSSSCG00000023041	PCBP3	88	76.358	Sus_scrofa
ENSOMEG00000015459	-	54	58.228	ENSTBEG00000011882	-	73	58.228	Tupaia_belangeri
ENSOMEG00000015459	-	69	75.362	ENSUAMG00000006491	PCBP3	96	75.362	Ursus_americanus
ENSOMEG00000015459	-	72	64.012	ENSUMAG00000025403	PCBP3	88	64.012	Ursus_maritimus
ENSOMEG00000015459	-	72	68.308	ENSVVUG00000023862	PCBP3	97	65.257	Vulpes_vulpes
ENSOMEG00000015459	-	100	91.705	ENSXMAG00000008030	zgc:110045	100	91.705	Xiphophorus_maculatus