EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOMEG00000015471 (Gene tree)
Gene ID: 112142474
Gene Symbol: SCAF8
Alias: -
Full Name: SR-related CTD associated factor 8
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 24104 bases
Position: chrNVQA01000001.1:17034023-17058126
Accession: 112142474
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000013989	RRM_1	PF00076.22	4.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000021800	SCAF8-201	4155	-	ENSOMEP00000013989	1384 (aa)	XP_024121666	UPI000CF81E8F

Gene Model

Click here to download ENSOMEG00000015471's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000015471's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000015471	SCAF8	77	66.053	ENSG00000213079	SCAF8	93	56.766	Homo_sapiens
ENSOMEG00000015471	SCAF8	100	82.068	ENSAPOG00000015527	SCAF8	100	81.448	Acanthochromis_polyacanthus
ENSOMEG00000015471	SCAF8	77	67.548	ENSAMEG00000007583	SCAF8	90	55.519	Ailuropoda_melanoleuca
ENSOMEG00000015471	SCAF8	100	81.690	ENSAOCG00000002421	SCAF8	100	81.690	Amphiprion_ocellaris
ENSOMEG00000015471	SCAF8	98	72.303	ENSAPEG00000020115	SCAF8	68	64.637	Amphiprion_percula
ENSOMEG00000015471	SCAF8	77	82.979	ENSATEG00000006959	SCAF8	95	82.762	Anabas_testudineus
ENSOMEG00000015471	SCAF8	77	71.597	ENSAPLG00000005765	SCAF8	92	68.305	Anas_platyrhynchos
ENSOMEG00000015471	SCAF8	74	72.497	ENSACAG00000005282	SCAF8	81	71.963	Anolis_carolinensis
ENSOMEG00000015471	SCAF8	77	66.980	ENSANAG00000036184	SCAF8	86	69.174	Aotus_nancymaae
ENSOMEG00000015471	SCAF8	100	79.298	ENSACLG00000018828	SCAF8	100	78.797	Astatotilapia_calliptera
ENSOMEG00000015471	SCAF8	77	69.287	ENSBTAG00000031917	SCAF8	86	69.410	Bos_taurus
ENSOMEG00000015471	SCAF8	77	66.283	ENSCJAG00000012631	SCAF8	83	67.668	Callithrix_jacchus
ENSOMEG00000015471	SCAF8	77	65.783	ENSCAFG00000000570	SCAF8	85	69.413	Canis_familiaris
ENSOMEG00000015471	SCAF8	77	69.202	ENSCAFG00020015048	SCAF8	84	69.413	Canis_lupus_dingo
ENSOMEG00000015471	SCAF8	77	69.165	ENSCHIG00000025041	SCAF8	86	69.287	Capra_hircus
ENSOMEG00000015471	SCAF8	77	66.825	ENSTSYG00000010991	SCAF8	87	66.157	Carlito_syrichta
ENSOMEG00000015471	SCAF8	58	70.667	ENSCAPG00000003300	SCAF8	71	70.667	Cavia_aperea
ENSOMEG00000015471	SCAF8	77	57.320	ENSCPOG00000022216	-	86	57.940	Cavia_porcellus
ENSOMEG00000015471	SCAF8	77	66.053	ENSCCAG00000024952	SCAF8	86	69.174	Cebus_capucinus
ENSOMEG00000015471	SCAF8	77	66.957	ENSCATG00000035361	SCAF8	86	69.174	Cercocebus_atys
ENSOMEG00000015471	SCAF8	77	68.323	ENSCLAG00000004910	SCAF8	86	68.323	Chinchilla_lanigera
ENSOMEG00000015471	SCAF8	77	64.494	ENSCSAG00000013430	SCAF8	86	67.428	Chlorocebus_sabaeus
ENSOMEG00000015471	SCAF8	77	70.334	ENSCPBG00000016330	SCAF8	81	69.523	Chrysemys_picta_bellii
ENSOMEG00000015471	SCAF8	77	65.938	ENSCANG00000039499	SCAF8	85	68.914	Colobus_angolensis_palliatus
ENSOMEG00000015471	SCAF8	78	72.513	ENSCGRG00001020167	Scaf8	93	56.811	Cricetulus_griseus_chok1gshd
ENSOMEG00000015471	SCAF8	77	72.318	ENSCGRG00000004120	Scaf8	92	56.569	Cricetulus_griseus_crigri
ENSOMEG00000015471	SCAF8	100	76.333	ENSCSEG00000000043	-	100	76.743	Cynoglossus_semilaevis
ENSOMEG00000015471	SCAF8	96	76.102	ENSCVAG00000000925	SCAF8	99	75.653	Cyprinodon_variegatus
ENSOMEG00000015471	SCAF8	74	65.897	ENSDNOG00000025271	SCAF8	87	65.385	Dasypus_novemcinctus
ENSOMEG00000015471	SCAF8	77	65.893	ENSDORG00000006391	Scaf8	90	65.661	Dipodomys_ordii
ENSOMEG00000015471	SCAF8	77	68.673	ENSEASG00005018879	SCAF8	86	69.287	Equus_asinus_asinus
ENSOMEG00000015471	SCAF8	77	69.127	ENSECAG00000005540	SCAF8	86	69.250	Equus_caballus
ENSOMEG00000015471	SCAF8	76	70.387	ENSELUG00000002779	SCAF8	100	60.815	Esox_lucius
ENSOMEG00000015471	SCAF8	77	66.136	ENSFCAG00000023424	SCAF8	90	66.250	Felis_catus
ENSOMEG00000015471	SCAF8	75	70.573	ENSFALG00000012433	SCAF8	93	68.681	Ficedula_albicollis
ENSOMEG00000015471	SCAF8	77	68.875	ENSFDAG00000010335	SCAF8	85	68.395	Fukomys_damarensis
ENSOMEG00000015471	SCAF8	100	77.587	ENSFHEG00000008284	SCAF8	100	78.158	Fundulus_heteroclitus
ENSOMEG00000015471	SCAF8	65	77.861	ENSGMOG00000018812	SCAF8	83	77.861	Gadus_morhua
ENSOMEG00000015471	SCAF8	77	72.063	ENSGALG00000013635	SCAF8	89	71.838	Gallus_gallus
ENSOMEG00000015471	SCAF8	100	76.754	ENSGAFG00000018033	SCAF8	100	77.179	Gambusia_affinis
ENSOMEG00000015471	SCAF8	77	79.022	ENSGACG00000006909	SCAF8	99	78.980	Gasterosteus_aculeatus
ENSOMEG00000015471	SCAF8	77	66.053	ENSGGOG00000008645	SCAF8	90	66.053	Gorilla_gorilla
ENSOMEG00000015471	SCAF8	100	79.226	ENSHBUG00000019537	SCAF8	100	78.797	Haplochromis_burtoni
ENSOMEG00000015471	SCAF8	77	68.765	ENSHGLG00000003619	SCAF8	86	68.765	Heterocephalus_glaber_female
ENSOMEG00000015471	SCAF8	77	68.625	ENSHGLG00100004708	SCAF8	86	68.625	Heterocephalus_glaber_male
ENSOMEG00000015471	SCAF8	77	69.125	ENSSTOG00000026043	SCAF8	85	69.125	Ictidomys_tridecemlineatus
ENSOMEG00000015471	SCAF8	76	68.519	ENSJJAG00000020480	Scaf8	92	55.853	Jaculus_jaculus
ENSOMEG00000015471	SCAF8	100	80.786	ENSKMAG00000012767	SCAF8	100	80.643	Kryptolebias_marmoratus
ENSOMEG00000015471	SCAF8	83	95.896	ENSLBEG00000012484	-	92	92.953	Labrus_bergylta
ENSOMEG00000015471	SCAF8	78	64.056	ENSLOCG00000016856	SCAF8	93	64.493	Lepisosteus_oculatus
ENSOMEG00000015471	SCAF8	75	71.969	ENSLAFG00000000022	SCAF8	93	56.990	Loxodonta_africana
ENSOMEG00000015471	SCAF8	77	66.053	ENSMFAG00000032738	SCAF8	86	69.174	Macaca_fascicularis
ENSOMEG00000015471	SCAF8	77	66.053	ENSMMUG00000015163	SCAF8	86	69.174	Macaca_mulatta
ENSOMEG00000015471	SCAF8	77	66.053	ENSMNEG00000043466	SCAF8	86	69.174	Macaca_nemestrina
ENSOMEG00000015471	SCAF8	77	66.007	ENSMLEG00000034845	SCAF8	85	69.164	Mandrillus_leucophaeus
ENSOMEG00000015471	SCAF8	97	77.663	ENSMAMG00000009457	SCAF8	100	77.047	Mastacembelus_armatus
ENSOMEG00000015471	SCAF8	100	79.226	ENSMZEG00005005698	SCAF8	100	78.725	Maylandia_zebra
ENSOMEG00000015471	SCAF8	77	68.974	ENSMGAG00000012762	SCAF8	93	67.874	Meleagris_gallopavo
ENSOMEG00000015471	SCAF8	77	72.546	ENSMAUG00000009513	Scaf8	93	56.868	Mesocricetus_auratus
ENSOMEG00000015471	SCAF8	77	66.941	ENSMICG00000028965	SCAF8	88	66.941	Microcebus_murinus
ENSOMEG00000015471	SCAF8	75	72.120	ENSMOCG00000014950	Scaf8	82	71.859	Microtus_ochrogaster
ENSOMEG00000015471	SCAF8	98	74.311	ENSMMOG00000002216	SCAF8	99	74.872	Mola_mola
ENSOMEG00000015471	SCAF8	77	70.125	ENSMODG00000008301	SCAF8	85	70.500	Monodelphis_domestica
ENSOMEG00000015471	SCAF8	100	78.350	ENSMALG00000011584	SCAF8	100	78.491	Monopterus_albus
ENSOMEG00000015471	SCAF8	75	71.859	MGP_CAROLIEiJ_G0021016	Scaf8	93	56.302	Mus_caroli
ENSOMEG00000015471	SCAF8	75	71.728	ENSMUSG00000046201	Scaf8	93	56.136	Mus_musculus
ENSOMEG00000015471	SCAF8	75	72.251	MGP_PahariEiJ_G0023334	Scaf8	93	56.551	Mus_pahari
ENSOMEG00000015471	SCAF8	75	69.936	ENSMPUG00000001974	SCAF8	83	70.064	Mustela_putorius_furo
ENSOMEG00000015471	SCAF8	77	65.402	ENSMLUG00000029190	SCAF8	92	66.432	Myotis_lucifugus
ENSOMEG00000015471	SCAF8	80	68.376	ENSNGAG00000012332	Scaf8	93	56.705	Nannospalax_galili
ENSOMEG00000015471	SCAF8	79	78.206	ENSNBRG00000009067	SCAF8	93	79.409	Neolamprologus_brichardi
ENSOMEG00000015471	SCAF8	77	64.564	ENSNLEG00000015509	SCAF8	89	64.385	Nomascus_leucogenys
ENSOMEG00000015471	SCAF8	54	75.258	ENSOPRG00000018413	-	69	75.258	Ochotona_princeps
ENSOMEG00000015471	SCAF8	77	68.927	ENSODEG00000007296	SCAF8	86	68.927	Octodon_degus
ENSOMEG00000015471	SCAF8	77	83.894	ENSONIG00000008119	SCAF8	92	83.666	Oreochromis_niloticus
ENSOMEG00000015471	SCAF8	77	69.202	ENSOCUG00000026063	SCAF8	85	69.202	Oryctolagus_cuniculus
ENSOMEG00000015471	SCAF8	100	93.094	ENSORLG00000017358	SCAF8	100	93.165	Oryzias_latipes
ENSOMEG00000015471	SCAF8	100	92.662	ENSORLG00020002214	SCAF8	100	92.734	Oryzias_latipes_hni
ENSOMEG00000015471	SCAF8	100	93.094	ENSORLG00015015779	SCAF8	100	93.094	Oryzias_latipes_hsok
ENSOMEG00000015471	SCAF8	77	64.270	ENSOGAG00000034223	SCAF8	90	55.447	Otolemur_garnettii
ENSOMEG00000015471	SCAF8	77	69.068	ENSOARG00000004159	SCAF8	86	69.193	Ovis_aries
ENSOMEG00000015471	SCAF8	77	66.053	ENSPPAG00000039826	SCAF8	93	56.766	Pan_paniscus
ENSOMEG00000015471	SCAF8	77	66.250	ENSPPRG00000023175	SCAF8	90	66.364	Panthera_pardus
ENSOMEG00000015471	SCAF8	77	66.092	ENSPTIG00000014836	SCAF8	90	66.207	Panthera_tigris_altaica
ENSOMEG00000015471	SCAF8	77	66.053	ENSPTRG00000018727	SCAF8	93	56.766	Pan_troglodytes
ENSOMEG00000015471	SCAF8	77	66.053	ENSPANG00000017489	SCAF8	85	66.461	Papio_anubis
ENSOMEG00000015471	SCAF8	78	70.171	ENSPKIG00000021212	SCAF8	89	72.429	Paramormyrops_kingsleyae
ENSOMEG00000015471	SCAF8	67	66.015	ENSPSIG00000008614	SCAF8	70	65.766	Pelodiscus_sinensis
ENSOMEG00000015471	SCAF8	74	71.883	ENSPEMG00000010531	Scaf8	82	71.618	Peromyscus_maniculatus_bairdii
ENSOMEG00000015471	SCAF8	77	70.494	ENSPCIG00000001141	SCAF8	86	70.741	Phascolarctos_cinereus
ENSOMEG00000015471	SCAF8	100	77.952	ENSPFOG00000004176	SCAF8	89	89.948	Poecilia_formosa
ENSOMEG00000015471	SCAF8	100	78.094	ENSPLAG00000021432	SCAF8	100	78.196	Poecilia_latipinna
ENSOMEG00000015471	SCAF8	100	77.809	ENSPMEG00000007591	SCAF8	100	78.023	Poecilia_mexicana
ENSOMEG00000015471	SCAF8	100	77.952	ENSPREG00000000652	SCAF8	100	77.369	Poecilia_reticulata
ENSOMEG00000015471	SCAF8	77	64.753	ENSPPYG00000017121	SCAF8	90	64.753	Pongo_abelii
ENSOMEG00000015471	SCAF8	64	79.933	ENSPCAG00000013044	SCAF8	74	80.100	Procavia_capensis
ENSOMEG00000015471	SCAF8	77	66.244	ENSPCOG00000002067	SCAF8	87	67.024	Propithecus_coquereli
ENSOMEG00000015471	SCAF8	77	64.491	ENSPVAG00000005582	SCAF8	87	68.927	Pteropus_vampyrus
ENSOMEG00000015471	SCAF8	100	79.298	ENSPNYG00000007277	SCAF8	100	78.797	Pundamilia_nyererei
ENSOMEG00000015471	SCAF8	81	70.990	ENSPNAG00000024740	SCAF8	81	73.102	Pygocentrus_nattereri
ENSOMEG00000015471	SCAF8	78	71.990	ENSRNOG00000016919	Scaf8	82	71.990	Rattus_norvegicus
ENSOMEG00000015471	SCAF8	77	66.832	ENSRBIG00000035769	SCAF8	86	69.051	Rhinopithecus_bieti
ENSOMEG00000015471	SCAF8	77	65.938	ENSRROG00000013580	SCAF8	86	69.051	Rhinopithecus_roxellana
ENSOMEG00000015471	SCAF8	77	69.174	ENSSBOG00000027023	SCAF8	88	66.980	Saimiri_boliviensis_boliviensis
ENSOMEG00000015471	SCAF8	77	69.630	ENSSHAG00000009915	SCAF8	86	70.530	Sarcophilus_harrisii
ENSOMEG00000015471	SCAF8	77	64.087	ENSSFOG00015009481	SCAF8	86	79.200	Scleropages_formosus
ENSOMEG00000015471	SCAF8	100	72.678	ENSSMAG00000008275	SCAF8	100	77.295	Scophthalmus_maximus
ENSOMEG00000015471	SCAF8	77	72.775	ENSSPUG00000015219	SCAF8	82	69.479	Sphenodon_punctatus
ENSOMEG00000015471	SCAF8	77	67.292	ENSSSCG00000004070	SCAF8	88	67.409	Sus_scrofa
ENSOMEG00000015471	SCAF8	77	69.385	ENSTGUG00000011151	SCAF8	85	69.385	Taeniopygia_guttata
ENSOMEG00000015471	SCAF8	100	74.965	ENSTRUG00000009243	SCAF8	100	74.239	Takifugu_rubripes
ENSOMEG00000015471	SCAF8	77	79.053	ENSTNIG00000016885	SCAF8	99	78.683	Tetraodon_nigroviridis
ENSOMEG00000015471	SCAF8	77	64.460	ENSTTRG00000014538	SCAF8	86	68.120	Tursiops_truncatus
ENSOMEG00000015471	SCAF8	77	69.458	ENSUAMG00000024736	SCAF8	85	69.451	Ursus_americanus
ENSOMEG00000015471	SCAF8	76	68.996	ENSUMAG00000013404	SCAF8	85	69.123	Ursus_maritimus
ENSOMEG00000015471	SCAF8	59	58.452	ENSVPAG00000012465	SCAF8	97	60.766	Vicugna_pacos
ENSOMEG00000015471	SCAF8	77	65.783	ENSVVUG00000007532	SCAF8	86	69.084	Vulpes_vulpes
ENSOMEG00000015471	SCAF8	71	70.376	ENSXETG00000013132	scaf8	77	70.732	Xenopus_tropicalis
ENSOMEG00000015471	SCAF8	100	77.794	ENSXMAG00000019192	SCAF8	100	77.794	Xiphophorus_maculatus