EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOMEG00000015507 (Gene tree)
Gene ID: 112153157
Gene Symbol: cstf2
Alias: -
Full Name: cleavage stimulation factor subunit 2
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 15320 bases
Position: chrNVQA01000017.1:15883133-15898452
Accession: 112153157
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000014007	RRM_1	PF00076.22	1.4e-24	1	1
ENSOMEP00000030960	RRM_1	PF00076.22	1.5e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000021778	-	6570	-	ENSOMEP00000014007	496 (aa)	XP_024138892	UPI000CF7F3B4
ENSOMET00000021821	-	6630	-	ENSOMEP00000030960	516 (aa)	XP_024138891	UPI000CF7C059

Gene Model

Click here to download ENSOMEG00000015507's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000015507's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000015507	cstf2	97	59.966	ENSG00000101811	CSTF2	81	92.350	Homo_sapiens
ENSOMEG00000015507	cstf2	97	89.379	ENSAPOG00000005630	cstf2	96	88.727	Acanthochromis_polyacanthus
ENSOMEG00000015507	cstf2	97	58.170	ENSAMEG00000002082	CSTF2	83	81.328	Ailuropoda_melanoleuca
ENSOMEG00000015507	cstf2	96	85.774	ENSACIG00000012852	cstf2	100	85.111	Amphilophus_citrinellus
ENSOMEG00000015507	cstf2	100	87.928	ENSAOCG00000020905	cstf2	100	87.928	Amphiprion_ocellaris
ENSOMEG00000015507	cstf2	100	88.129	ENSAPEG00000006526	cstf2	100	88.129	Amphiprion_percula
ENSOMEG00000015507	cstf2	100	85.385	ENSATEG00000018186	cstf2	100	85.000	Anabas_testudineus
ENSOMEG00000015507	cstf2	93	60.068	ENSAPLG00000007255	CSTF2	83	82.305	Anas_platyrhynchos
ENSOMEG00000015507	cstf2	97	73.540	ENSANAG00000022342	CSTF2	79	81.328	Aotus_nancymaae
ENSOMEG00000015507	cstf2	100	86.694	ENSACLG00000000779	cstf2	96	87.621	Astatotilapia_calliptera
ENSOMEG00000015507	cstf2	88	88.696	ENSAMXG00000021477	cstf2	71	98.413	Astyanax_mexicanus
ENSOMEG00000015507	cstf2	97	60.241	ENSBTAG00000003547	CSTF2	83	80.498	Bos_taurus
ENSOMEG00000015507	cstf2	97	60.792	ENSCJAG00000004422	CSTF2	99	58.179	Callithrix_jacchus
ENSOMEG00000015507	cstf2	97	59.556	ENSCAFG00000017551	CSTF2	86	81.328	Canis_familiaris
ENSOMEG00000015507	cstf2	97	73.540	ENSCAFG00020007619	CSTF2	83	81.328	Canis_lupus_dingo
ENSOMEG00000015507	cstf2	97	60.069	ENSCHIG00000016994	CSTF2	83	80.498	Capra_hircus
ENSOMEG00000015507	cstf2	97	59.622	ENSTSYG00000006529	CSTF2	86	81.328	Carlito_syrichta
ENSOMEG00000015507	cstf2	97	59.897	ENSCPOG00000015255	CSTF2	84	92.810	Cavia_porcellus
ENSOMEG00000015507	cstf2	97	60.142	ENSCCAG00000032975	CSTF2	99	58.362	Cebus_capucinus
ENSOMEG00000015507	cstf2	97	60.676	ENSCATG00000022835	CSTF2	83	81.328	Cercocebus_atys
ENSOMEG00000015507	cstf2	97	59.725	ENSCLAG00000001904	CSTF2	85	91.026	Chinchilla_lanigera
ENSOMEG00000015507	cstf2	97	59.136	ENSCSAG00000010360	CSTF2	83	81.328	Chlorocebus_sabaeus
ENSOMEG00000015507	cstf2	97	67.361	ENSCPBG00000014293	CSTF2	91	67.832	Chrysemys_picta_bellii
ENSOMEG00000015507	cstf2	97	60.498	ENSCANG00000030612	CSTF2	83	81.328	Colobus_angolensis_palliatus
ENSOMEG00000015507	cstf2	96	60.172	ENSCGRG00001023023	Cstf2	86	81.667	Cricetulus_griseus_chok1gshd
ENSOMEG00000015507	cstf2	96	87.631	ENSCVAG00000005731	cstf2	100	85.484	Cyprinodon_variegatus
ENSOMEG00000015507	cstf2	77	98.182	ENSDARG00000090788	cstf2	96	96.667	Danio_rerio
ENSOMEG00000015507	cstf2	97	60.274	ENSDORG00000007195	Cstf2	83	93.377	Dipodomys_ordii
ENSOMEG00000015507	cstf2	73	87.273	ENSETEG00000004931	CSTF2	64	87.273	Echinops_telfairi
ENSOMEG00000015507	cstf2	97	57.921	ENSEASG00005001216	CSTF2	83	80.992	Equus_asinus_asinus
ENSOMEG00000015507	cstf2	97	58.632	ENSECAG00000009325	CSTF2	83	80.992	Equus_caballus
ENSOMEG00000015507	cstf2	97	59.215	ENSFCAG00000007000	CSTF2	83	81.328	Felis_catus
ENSOMEG00000015507	cstf2	88	57.692	ENSFALG00000003859	CSTF2	84	80.930	Ficedula_albicollis
ENSOMEG00000015507	cstf2	97	73.064	ENSFDAG00000002416	CSTF2	86	81.328	Fukomys_damarensis
ENSOMEG00000015507	cstf2	96	86.957	ENSFHEG00000017065	cstf2	96	85.305	Fundulus_heteroclitus
ENSOMEG00000015507	cstf2	96	74.274	ENSGMOG00000005145	cstf2	100	75.884	Gadus_morhua
ENSOMEG00000015507	cstf2	97	61.724	ENSGALG00000006760	CSTF2	99	63.130	Gallus_gallus
ENSOMEG00000015507	cstf2	96	84.536	ENSGAFG00000020027	cstf2	100	83.929	Gambusia_affinis
ENSOMEG00000015507	cstf2	97	78.711	ENSGACG00000017326	cstf2	98	79.297	Gasterosteus_aculeatus
ENSOMEG00000015507	cstf2	97	58.920	ENSGAGG00000006037	CSTF2	88	82.677	Gopherus_agassizii
ENSOMEG00000015507	cstf2	97	60.676	ENSGGOG00000022267	CSTF2	83	81.328	Gorilla_gorilla
ENSOMEG00000015507	cstf2	100	86.747	ENSHBUG00000016183	cstf2	96	87.669	Haplochromis_burtoni
ENSOMEG00000015507	cstf2	96	52.951	ENSHGLG00000013455	-	99	50.690	Heterocephalus_glaber_female
ENSOMEG00000015507	cstf2	97	59.794	ENSHGLG00000000659	-	86	89.506	Heterocephalus_glaber_female
ENSOMEG00000015507	cstf2	96	52.951	ENSHGLG00100015391	-	99	50.690	Heterocephalus_glaber_male
ENSOMEG00000015507	cstf2	97	59.794	ENSHGLG00100001130	-	86	89.506	Heterocephalus_glaber_male
ENSOMEG00000015507	cstf2	96	85.177	ENSHCOG00000005157	cstf2	96	85.170	Hippocampus_comes
ENSOMEG00000015507	cstf2	98	68.679	ENSIPUG00000017839	cstf2	97	65.985	Ictalurus_punctatus
ENSOMEG00000015507	cstf2	97	60.938	ENSSTOG00000023445	CSTF2	85	91.026	Ictidomys_tridecemlineatus
ENSOMEG00000015507	cstf2	96	59.622	ENSJJAG00000020507	Cstf2	85	91.026	Jaculus_jaculus
ENSOMEG00000015507	cstf2	100	87.123	ENSKMAG00000001068	cstf2	100	87.324	Kryptolebias_marmoratus
ENSOMEG00000015507	cstf2	65	93.333	ENSLBEG00000028720	cstf2	89	93.333	Labrus_bergylta
ENSOMEG00000015507	cstf2	97	61.409	ENSLACG00000015927	CSTF2	99	59.729	Latimeria_chalumnae
ENSOMEG00000015507	cstf2	98	86.154	ENSLOCG00000015300	cstf2	83	86.154	Lepisosteus_oculatus
ENSOMEG00000015507	cstf2	97	60.276	ENSLAFG00000000474	CSTF2	86	82.158	Loxodonta_africana
ENSOMEG00000015507	cstf2	97	60.498	ENSMFAG00000043888	CSTF2	83	81.328	Macaca_fascicularis
ENSOMEG00000015507	cstf2	97	60.498	ENSMMUG00000013008	CSTF2	99	59.609	Macaca_mulatta
ENSOMEG00000015507	cstf2	97	60.498	ENSMNEG00000041824	CSTF2	83	81.328	Macaca_nemestrina
ENSOMEG00000015507	cstf2	97	60.498	ENSMLEG00000036870	CSTF2	83	81.328	Mandrillus_leucophaeus
ENSOMEG00000015507	cstf2	94	88.651	ENSMAMG00000020364	cstf2	96	87.794	Mastacembelus_armatus
ENSOMEG00000015507	cstf2	100	86.694	ENSMZEG00005007200	cstf2	100	87.621	Maylandia_zebra
ENSOMEG00000015507	cstf2	90	58.879	ENSMGAG00000004139	CSTF2	99	61.087	Meleagris_gallopavo
ENSOMEG00000015507	cstf2	96	59.552	ENSMAUG00000000965	Cstf2	86	81.667	Mesocricetus_auratus
ENSOMEG00000015507	cstf2	97	74.074	ENSMICG00000014121	CSTF2	79	82.573	Microcebus_murinus
ENSOMEG00000015507	cstf2	96	59.107	ENSMOCG00000008081	Cstf2	85	82.979	Microtus_ochrogaster
ENSOMEG00000015507	cstf2	96	74.633	ENSMMOG00000000538	cstf2	96	75.365	Mola_mola
ENSOMEG00000015507	cstf2	97	61.616	ENSMODG00000011785	CSTF2	99	61.356	Monodelphis_domestica
ENSOMEG00000015507	cstf2	96	75.779	MGP_CAROLIEiJ_G0033383	Cstf2	84	92.258	Mus_caroli
ENSOMEG00000015507	cstf2	96	60.901	ENSMUSG00000031256	Cstf2	84	92.258	Mus_musculus
ENSOMEG00000015507	cstf2	96	75.779	MGP_PahariEiJ_G0031923	Cstf2	86	82.573	Mus_pahari
ENSOMEG00000015507	cstf2	96	74.825	MGP_SPRETEiJ_G0034548	Cstf2	84	92.258	Mus_spretus
ENSOMEG00000015507	cstf2	97	73.196	ENSMPUG00000002339	CSTF2	80	81.328	Mustela_putorius_furo
ENSOMEG00000015507	cstf2	96	56.063	ENSMLUG00000004598	CSTF2	78	80.816	Myotis_lucifugus
ENSOMEG00000015507	cstf2	96	61.352	ENSNGAG00000021985	Cstf2	86	81.743	Nannospalax_galili
ENSOMEG00000015507	cstf2	93	77.708	ENSNBRG00000021694	cstf2	100	80.498	Neolamprologus_brichardi
ENSOMEG00000015507	cstf2	97	60.498	ENSNLEG00000007510	CSTF2	86	81.328	Nomascus_leucogenys
ENSOMEG00000015507	cstf2	97	62.214	ENSMEUG00000011186	-	99	63.036	Notamacropus_eugenii
ENSOMEG00000015507	cstf2	87	59.962	ENSMEUG00000014025	-	99	60.980	Notamacropus_eugenii
ENSOMEG00000015507	cstf2	97	61.687	ENSMEUG00000007875	-	99	61.376	Notamacropus_eugenii
ENSOMEG00000015507	cstf2	81	76.923	ENSOPRG00000003106	CSTF2	78	76.923	Ochotona_princeps
ENSOMEG00000015507	cstf2	97	60.034	ENSODEG00000002059	CSTF2	99	58.722	Octodon_degus
ENSOMEG00000015507	cstf2	91	90.688	ENSONIG00000002631	cstf2	70	85.821	Oreochromis_niloticus
ENSOMEG00000015507	cstf2	84	87.755	ENSOANG00000004208	CSTF2	72	89.091	Ornithorhynchus_anatinus
ENSOMEG00000015507	cstf2	97	59.075	ENSOCUG00000010468	CSTF2	99	59.266	Oryctolagus_cuniculus
ENSOMEG00000015507	cstf2	96	95.573	ENSORLG00000001380	cstf2	100	95.543	Oryzias_latipes
ENSOMEG00000015507	cstf2	100	96.124	ENSORLG00020021917	cstf2	100	96.124	Oryzias_latipes_hni
ENSOMEG00000015507	cstf2	100	96.124	ENSORLG00015011996	cstf2	100	96.124	Oryzias_latipes_hsok
ENSOMEG00000015507	cstf2	97	74.476	ENSOGAG00000011192	CSTF2	79	81.250	Otolemur_garnettii
ENSOMEG00000015507	cstf2	97	60.069	ENSOARG00000001022	CSTF2	99	57.336	Ovis_aries
ENSOMEG00000015507	cstf2	97	60.676	ENSPPAG00000031804	CSTF2	83	81.328	Pan_paniscus
ENSOMEG00000015507	cstf2	97	59.215	ENSPPRG00000022492	CSTF2	83	81.328	Panthera_pardus
ENSOMEG00000015507	cstf2	97	58.874	ENSPTIG00000009922	CSTF2	83	80.498	Panthera_tigris_altaica
ENSOMEG00000015507	cstf2	97	60.676	ENSPTRG00000022090	CSTF2	83	81.328	Pan_troglodytes
ENSOMEG00000015507	cstf2	97	73.883	ENSPANG00000002303	CSTF2	83	81.328	Papio_anubis
ENSOMEG00000015507	cstf2	98	72.134	ENSPKIG00000005033	cstf2	92	73.523	Paramormyrops_kingsleyae
ENSOMEG00000015507	cstf2	96	86.611	ENSPMGG00000006534	cstf2	96	86.639	Periophthalmus_magnuspinnatus
ENSOMEG00000015507	cstf2	96	58.333	ENSPEMG00000019415	Cstf2	86	82.427	Peromyscus_maniculatus_bairdii
ENSOMEG00000015507	cstf2	93	62.081	ENSPCIG00000002989	CSTF2	84	84.898	Phascolarctos_cinereus
ENSOMEG00000015507	cstf2	96	84.211	ENSPLAG00000011176	cstf2	100	83.431	Poecilia_latipinna
ENSOMEG00000015507	cstf2	96	83.198	ENSPMEG00000017743	cstf2	100	83.236	Poecilia_mexicana
ENSOMEG00000015507	cstf2	66	86.391	ENSPREG00000011481	cstf2	100	79.041	Poecilia_reticulata
ENSOMEG00000015507	cstf2	97	59.136	ENSPPYG00000020541	CSTF2	83	81.328	Pongo_abelii
ENSOMEG00000015507	cstf2	97	59.578	ENSPCOG00000027744	CSTF2	99	59.239	Propithecus_coquereli
ENSOMEG00000015507	cstf2	93	47.535	ENSPVAG00000008342	CSTF2	99	47.826	Pteropus_vampyrus
ENSOMEG00000015507	cstf2	100	80.309	ENSPNYG00000010852	cstf2	100	85.870	Pundamilia_nyererei
ENSOMEG00000015507	cstf2	96	71.984	ENSPNAG00000018887	cstf2	97	69.549	Pygocentrus_nattereri
ENSOMEG00000015507	cstf2	96	59.589	ENSRNOG00000048025	Cstf2	86	82.573	Rattus_norvegicus
ENSOMEG00000015507	cstf2	97	60.644	ENSRBIG00000030745	CSTF2	99	59.750	Rhinopithecus_bieti
ENSOMEG00000015507	cstf2	97	60.498	ENSRROG00000045042	CSTF2	83	81.328	Rhinopithecus_roxellana
ENSOMEG00000015507	cstf2	97	73.540	ENSSBOG00000021649	CSTF2	79	81.328	Saimiri_boliviensis_boliviensis
ENSOMEG00000015507	cstf2	76	66.983	ENSSHAG00000003681	CSTF2	77	84.052	Sarcophilus_harrisii
ENSOMEG00000015507	cstf2	96	72.710	ENSSFOG00015006348	cstf2	97	72.045	Scleropages_formosus
ENSOMEG00000015507	cstf2	100	87.041	ENSSMAG00000013463	cstf2	100	87.726	Scophthalmus_maximus
ENSOMEG00000015507	cstf2	97	62.055	ENSSPUG00000005288	-	53	85.081	Sphenodon_punctatus
ENSOMEG00000015507	cstf2	97	60.437	ENSSSCG00000012486	CSTF2	99	57.673	Sus_scrofa
ENSOMEG00000015507	cstf2	97	60.101	ENSTGUG00000002253	CSTF2	87	83.071	Taeniopygia_guttata
ENSOMEG00000015507	cstf2	97	82.745	ENSTNIG00000016860	cstf2	98	82.704	Tetraodon_nigroviridis
ENSOMEG00000015507	cstf2	97	73.196	ENSUAMG00000026605	CSTF2	79	81.328	Ursus_americanus
ENSOMEG00000015507	cstf2	97	72.852	ENSUMAG00000012417	CSTF2	85	80.913	Ursus_maritimus
ENSOMEG00000015507	cstf2	76	69.679	ENSVPAG00000006466	CSTF2	53	79.253	Vicugna_pacos
ENSOMEG00000015507	cstf2	97	59.556	ENSVVUG00000004717	CSTF2	86	81.328	Vulpes_vulpes
ENSOMEG00000015507	cstf2	96	70.000	ENSXCOG00000016436	cstf2	100	89.412	Xiphophorus_couchianus
ENSOMEG00000015507	cstf2	66	86.095	ENSXMAG00000013524	cstf2	100	79.892	Xiphophorus_maculatus