EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000015557 (Gene tree)
Gene ID: 112137495
Gene Symbol: cnot3b
Alias: -
Full Name: CCR4-NOT transcription complex subunit 3-like
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 34220 bases
Position: chrNVQA01000004.1:16411196-16445415
Accession: 112137495
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000014025	Not3	PF04065.15	8.8e-96	1	1
ENSOMEP00000014049	Not3	PF04065.15	8.8e-96	1	1
ENSOMEP00000030927	Not3	PF04065.15	8.8e-96	1	1
ENSOMEP00000013954	Not3	PF04065.15	2e-93	1	1
ENSOMEP00000014025	NOT2_3_5	PF04153.18	8.4e-40	1	1
ENSOMEP00000014049	NOT2_3_5	PF04153.18	8.4e-40	1	1
ENSOMEP00000030927	NOT2_3_5	PF04153.18	8.4e-40	1	1
ENSOMEP00000013954	NOT2_3_5	PF04153.18	9.4e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000021809	-	4277	-	ENSOMEP00000014025	899 (aa)	XP_024115618	UPI000CF81E41
ENSOMET00000021871	-	4277	-	ENSOMEP00000014049	899 (aa)	XP_024115618	UPI000CF81E41
ENSOMET00000021772	-	4277	-	ENSOMEP00000030927	899 (aa)	XP_024115618	UPI000CF81E41
ENSOMET00000033354	-	2667	-	ENSOMEP00000013954	888 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000015557's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000015557's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000015557	cnot3b	98	70.127	ENSOMEG00000010309	cnot3a	100	66.203

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000015557	cnot3b	68	91.118	ENSG00000088038	CNOT3	100	93.299	Homo_sapiens
ENSOMEG00000015557	cnot3b	64	91.781	ENSAPOG00000015002	cnot3b	98	91.781	Acanthochromis_polyacanthus
ENSOMEG00000015557	cnot3b	58	82.418	ENSAPOG00000015499	CNOT3	91	82.418	Acanthochromis_polyacanthus
ENSOMEG00000015557	cnot3b	68	91.447	ENSAMEG00000004528	CNOT3	95	84.950	Ailuropoda_melanoleuca
ENSOMEG00000015557	cnot3b	68	94.872	ENSACIG00000006635	cnot3a	97	95.133	Amphilophus_citrinellus
ENSOMEG00000015557	cnot3b	68	95.089	ENSACIG00000003652	cnot3b	99	95.909	Amphilophus_citrinellus
ENSOMEG00000015557	cnot3b	97	74.834	ENSAOCG00000018385	-	98	80.100	Amphiprion_ocellaris
ENSOMEG00000015557	cnot3b	97	75.858	ENSAPEG00000002640	cnot3b	98	98.020	Amphiprion_percula
ENSOMEG00000015557	cnot3b	100	64.339	ENSATEG00000022737	cnot3a	100	65.882	Anabas_testudineus
ENSOMEG00000015557	cnot3b	100	81.683	ENSATEG00000015777	cnot3b	100	80.937	Anabas_testudineus
ENSOMEG00000015557	cnot3b	75	75.186	ENSACAG00000016085	CNOT3	97	90.789	Anolis_carolinensis
ENSOMEG00000015557	cnot3b	83	78.550	ENSANAG00000025756	CNOT3	93	84.615	Aotus_nancymaae
ENSOMEG00000015557	cnot3b	100	81.525	ENSACLG00000016702	cnot3b	100	80.794	Astatotilapia_calliptera
ENSOMEG00000015557	cnot3b	100	66.992	ENSAMXG00000012359	cnot3a	100	66.703	Astyanax_mexicanus
ENSOMEG00000015557	cnot3b	100	69.272	ENSAMXG00000009447	cnot3b	97	90.909	Astyanax_mexicanus
ENSOMEG00000015557	cnot3b	68	91.118	ENSBTAG00000014900	CNOT3	93	84.615	Bos_taurus
ENSOMEG00000015557	cnot3b	71	84.273	ENSCJAG00000001094	CNOT3	93	84.615	Callithrix_jacchus
ENSOMEG00000015557	cnot3b	68	91.118	ENSCAFG00000002699	CNOT3	92	84.615	Canis_familiaris
ENSOMEG00000015557	cnot3b	68	91.118	ENSCAFG00020018359	CNOT3	92	84.615	Canis_lupus_dingo
ENSOMEG00000015557	cnot3b	72	89.109	ENSCHIG00000015302	CNOT3	95	84.746	Capra_hircus
ENSOMEG00000015557	cnot3b	80	84.899	ENSTSYG00000008058	CNOT3	93	84.615	Carlito_syrichta
ENSOMEG00000015557	cnot3b	72	83.673	ENSCAPG00000009533	CNOT3	94	84.615	Cavia_aperea
ENSOMEG00000015557	cnot3b	90	77.193	ENSCPOG00000020741	CNOT3	94	84.615	Cavia_porcellus
ENSOMEG00000015557	cnot3b	85	78.550	ENSCCAG00000036290	CNOT3	93	84.615	Cebus_capucinus
ENSOMEG00000015557	cnot3b	68	91.118	ENSCATG00000030324	CNOT3	93	84.615	Cercocebus_atys
ENSOMEG00000015557	cnot3b	90	78.042	ENSCLAG00000003302	CNOT3	100	86.585	Chinchilla_lanigera
ENSOMEG00000015557	cnot3b	68	91.118	ENSCSAG00000001900	CNOT3	93	84.615	Chlorocebus_sabaeus
ENSOMEG00000015557	cnot3b	78	90.879	ENSCPBG00000011655	CNOT3	97	91.148	Chrysemys_picta_bellii
ENSOMEG00000015557	cnot3b	65	80.488	ENSCING00000000293	-	66	69.912	Ciona_intestinalis
ENSOMEG00000015557	cnot3b	68	91.118	ENSCANG00000013408	CNOT3	93	84.615	Colobus_angolensis_palliatus
ENSOMEG00000015557	cnot3b	80	84.257	ENSCGRG00001000855	Cnot3	94	84.950	Cricetulus_griseus_chok1gshd
ENSOMEG00000015557	cnot3b	50	69.302	ENSCGRG00000012929	Cnot3	68	69.302	Cricetulus_griseus_crigri
ENSOMEG00000015557	cnot3b	100	64.256	ENSCSEG00000003574	cnot3a	100	65.717	Cynoglossus_semilaevis
ENSOMEG00000015557	cnot3b	91	81.696	ENSCSEG00000016892	cnot3b	97	81.696	Cynoglossus_semilaevis
ENSOMEG00000015557	cnot3b	100	80.196	ENSCVAG00000022122	cnot3b	100	80.761	Cyprinodon_variegatus
ENSOMEG00000015557	cnot3b	100	68.689	ENSDARG00000019842	cnot3b	100	69.902	Danio_rerio
ENSOMEG00000015557	cnot3b	100	66.129	ENSDARG00000007135	cnot3a	100	67.676	Danio_rerio
ENSOMEG00000015557	cnot3b	68	91.447	ENSDNOG00000045972	CNOT3	94	91.148	Dasypus_novemcinctus
ENSOMEG00000015557	cnot3b	68	91.118	ENSDORG00000008021	Cnot3	100	81.609	Dipodomys_ordii
ENSOMEG00000015557	cnot3b	53	100.000	ENSETEG00000006305	CNOT3	61	100.000	Echinops_telfairi
ENSOMEG00000015557	cnot3b	68	70.779	ENSEBUG00000010437	cnot3a	96	71.104	Eptatretus_burgeri
ENSOMEG00000015557	cnot3b	68	91.118	ENSEASG00005021591	CNOT3	93	84.615	Equus_asinus_asinus
ENSOMEG00000015557	cnot3b	68	91.118	ENSECAG00000023181	CNOT3	93	84.615	Equus_caballus
ENSOMEG00000015557	cnot3b	100	71.414	ENSELUG00000000953	cnot3b	100	71.670	Esox_lucius
ENSOMEG00000015557	cnot3b	100	61.841	ENSELUG00000014743	cnot3a	100	64.594	Esox_lucius
ENSOMEG00000015557	cnot3b	88	77.745	ENSFCAG00000014042	CNOT3	94	84.615	Felis_catus
ENSOMEG00000015557	cnot3b	100	65.109	ENSFHEG00000023166	cnot3a	96	95.133	Fundulus_heteroclitus
ENSOMEG00000015557	cnot3b	100	79.548	ENSFHEG00000001696	cnot3b	100	79.741	Fundulus_heteroclitus
ENSOMEG00000015557	cnot3b	94	61.731	ENSGMOG00000005365	cnot3a	98	62.775	Gadus_morhua
ENSOMEG00000015557	cnot3b	100	81.937	ENSGAFG00000003459	cnot3b	100	81.481	Gambusia_affinis
ENSOMEG00000015557	cnot3b	56	58.939	ENSGAFG00000013094	cnot3a	100	65.989	Gambusia_affinis
ENSOMEG00000015557	cnot3b	67	87.970	ENSGACG00000009395	cnot3b	86	86.131	Gasterosteus_aculeatus
ENSOMEG00000015557	cnot3b	90	69.108	ENSGAGG00000012677	CNOT3	87	88.991	Gopherus_agassizii
ENSOMEG00000015557	cnot3b	68	91.118	ENSGGOG00000012996	CNOT3	93	90.820	Gorilla_gorilla
ENSOMEG00000015557	cnot3b	99	72.973	ENSHBUG00000019699	cnot3b	99	73.218	Haplochromis_burtoni
ENSOMEG00000015557	cnot3b	72	83.041	ENSHGLG00000008821	CNOT3	100	81.609	Heterocephalus_glaber_female
ENSOMEG00000015557	cnot3b	55	92.035	ENSHGLG00100006181	CNOT3	100	81.609	Heterocephalus_glaber_male
ENSOMEG00000015557	cnot3b	87	77.419	ENSIPUG00000000167	cnot3	99	78.802	Ictalurus_punctatus
ENSOMEG00000015557	cnot3b	100	66.667	ENSIPUG00000009046	cnot3b	100	65.838	Ictalurus_punctatus
ENSOMEG00000015557	cnot3b	68	91.118	ENSSTOG00000028248	CNOT3	93	84.615	Ictidomys_tridecemlineatus
ENSOMEG00000015557	cnot3b	76	84.211	ENSJJAG00000014594	Cnot3	100	81.609	Jaculus_jaculus
ENSOMEG00000015557	cnot3b	100	82.538	ENSKMAG00000018723	cnot3b	100	82.935	Kryptolebias_marmoratus
ENSOMEG00000015557	cnot3b	73	92.857	ENSKMAG00000004863	cnot3a	100	92.857	Kryptolebias_marmoratus
ENSOMEG00000015557	cnot3b	96	77.197	ENSLBEG00000018278	cnot3b	99	78.442	Labrus_bergylta
ENSOMEG00000015557	cnot3b	52	90.157	ENSLBEG00000017296	cnot3a	64	90.157	Labrus_bergylta
ENSOMEG00000015557	cnot3b	69	91.118	ENSLACG00000009742	CNOT3	88	90.820	Latimeria_chalumnae
ENSOMEG00000015557	cnot3b	54	95.098	ENSLOCG00000000005	cnot3b	79	95.098	Lepisosteus_oculatus
ENSOMEG00000015557	cnot3b	68	90.164	ENSLAFG00000022133	CNOT3	72	89.869	Loxodonta_africana
ENSOMEG00000015557	cnot3b	68	91.118	ENSMFAG00000040073	CNOT3	94	84.615	Macaca_fascicularis
ENSOMEG00000015557	cnot3b	61	91.176	ENSMMUG00000009698	CNOT3	100	99.020	Macaca_mulatta
ENSOMEG00000015557	cnot3b	68	91.118	ENSMNEG00000036750	CNOT3	93	84.615	Macaca_nemestrina
ENSOMEG00000015557	cnot3b	68	91.118	ENSMLEG00000036579	CNOT3	93	84.615	Mandrillus_leucophaeus
ENSOMEG00000015557	cnot3b	100	82.265	ENSMAMG00000019357	cnot3b	100	82.265	Mastacembelus_armatus
ENSOMEG00000015557	cnot3b	100	81.897	ENSMZEG00005002466	cnot3b	100	81.485	Maylandia_zebra
ENSOMEG00000015557	cnot3b	72	84.257	ENSMAUG00000014996	Cnot3	94	85.135	Mesocricetus_auratus
ENSOMEG00000015557	cnot3b	70	86.810	ENSMICG00000002370	CNOT3	93	84.615	Microcebus_murinus
ENSOMEG00000015557	cnot3b	98	56.941	ENSMMOG00000016446	cnot3a	100	65.021	Mola_mola
ENSOMEG00000015557	cnot3b	70	92.735	ENSMMOG00000013086	cnot3b	98	92.273	Mola_mola
ENSOMEG00000015557	cnot3b	60	91.118	ENSMODG00000004066	CNOT3	95	84.615	Monodelphis_domestica
ENSOMEG00000015557	cnot3b	77	93.173	ENSMALG00000004936	cnot3b	92	91.919	Monopterus_albus
ENSOMEG00000015557	cnot3b	100	65.064	ENSMALG00000009204	cnot3a	100	65.377	Monopterus_albus
ENSOMEG00000015557	cnot3b	68	91.447	MGP_CAROLIEiJ_G0029095	Cnot3	100	97.000	Mus_caroli
ENSOMEG00000015557	cnot3b	68	91.447	ENSMUSG00000035632	Cnot3	100	97.000	Mus_musculus
ENSOMEG00000015557	cnot3b	72	83.382	MGP_PahariEiJ_G0020964	Cnot3	100	97.000	Mus_pahari
ENSOMEG00000015557	cnot3b	68	91.447	MGP_SPRETEiJ_G0030148	Cnot3	100	97.000	Mus_spretus
ENSOMEG00000015557	cnot3b	68	91.118	ENSMPUG00000010352	CNOT3	91	84.615	Mustela_putorius_furo
ENSOMEG00000015557	cnot3b	72	83.041	ENSNGAG00000013266	Cnot3	93	84.615	Nannospalax_galili
ENSOMEG00000015557	cnot3b	99	70.698	ENSNBRG00000003336	cnot3b	97	91.284	Neolamprologus_brichardi
ENSOMEG00000015557	cnot3b	68	91.118	ENSNLEG00000006272	CNOT3	69	90.820	Nomascus_leucogenys
ENSOMEG00000015557	cnot3b	89	78.443	ENSODEG00000000705	CNOT3	100	89.873	Octodon_degus
ENSOMEG00000015557	cnot3b	100	66.015	ENSONIG00000006568	cnot3a	100	65.976	Oreochromis_niloticus
ENSOMEG00000015557	cnot3b	100	82.309	ENSONIG00000007047	cnot3b	100	82.740	Oreochromis_niloticus
ENSOMEG00000015557	cnot3b	71	84.570	ENSOCUG00000007691	CNOT3	93	84.615	Oryctolagus_cuniculus
ENSOMEG00000015557	cnot3b	100	91.438	ENSORLG00000005982	cnot3b	100	92.645	Oryzias_latipes
ENSOMEG00000015557	cnot3b	100	92.333	ENSORLG00020005779	cnot3b	100	92.333	Oryzias_latipes_hni
ENSOMEG00000015557	cnot3b	100	91.930	ENSORLG00015019021	cnot3b	100	92.148	Oryzias_latipes_hsok
ENSOMEG00000015557	cnot3b	72	83.673	ENSOGAG00000006945	CNOT3	93	84.615	Otolemur_garnettii
ENSOMEG00000015557	cnot3b	50	90.055	ENSOARG00000002981	CNOT3	65	90.055	Ovis_aries
ENSOMEG00000015557	cnot3b	68	91.118	ENSPPAG00000002748	CNOT3	93	84.615	Pan_paniscus
ENSOMEG00000015557	cnot3b	88	77.745	ENSPPRG00000011705	CNOT3	94	84.615	Panthera_pardus
ENSOMEG00000015557	cnot3b	62	91.275	ENSPTIG00000008781	CNOT3	93	91.275	Panthera_tigris_altaica
ENSOMEG00000015557	cnot3b	68	91.118	ENSPTRG00000011444	CNOT3	93	84.615	Pan_troglodytes
ENSOMEG00000015557	cnot3b	68	91.118	ENSPTRG00000046717	-	93	84.615	Pan_troglodytes
ENSOMEG00000015557	cnot3b	68	91.118	ENSPANG00000009375	CNOT3	93	84.615	Papio_anubis
ENSOMEG00000015557	cnot3b	100	66.526	ENSPKIG00000011733	CNOT3	100	67.125	Paramormyrops_kingsleyae
ENSOMEG00000015557	cnot3b	68	95.299	ENSPKIG00000015967	-	98	95.575	Paramormyrops_kingsleyae
ENSOMEG00000015557	cnot3b	98	68.000	ENSPMGG00000022539	cnot3b	99	70.481	Periophthalmus_magnuspinnatus
ENSOMEG00000015557	cnot3b	81	83.965	ENSPEMG00000024185	Cnot3	93	84.950	Peromyscus_maniculatus_bairdii
ENSOMEG00000015557	cnot3b	69	90.789	ENSPCIG00000023018	CNOT3	89	90.492	Phascolarctos_cinereus
ENSOMEG00000015557	cnot3b	100	81.659	ENSPFOG00000007168	cnot3b	100	82.661	Poecilia_formosa
ENSOMEG00000015557	cnot3b	95	64.803	ENSPFOG00000008693	cnot3a	99	87.821	Poecilia_formosa
ENSOMEG00000015557	cnot3b	100	81.659	ENSPLAG00000013457	cnot3b	100	82.661	Poecilia_latipinna
ENSOMEG00000015557	cnot3b	100	82.807	ENSPMEG00000010184	cnot3b	100	83.007	Poecilia_mexicana
ENSOMEG00000015557	cnot3b	68	94.017	ENSPREG00000007592	cnot3a	100	88.281	Poecilia_reticulata
ENSOMEG00000015557	cnot3b	99	76.821	ENSPREG00000000662	cnot3b	97	78.343	Poecilia_reticulata
ENSOMEG00000015557	cnot3b	68	90.789	ENSPPYG00000010372	CNOT3	93	84.281	Pongo_abelii
ENSOMEG00000015557	cnot3b	51	94.915	ENSPCAG00000011999	CNOT3	56	94.915	Procavia_capensis
ENSOMEG00000015557	cnot3b	70	86.810	ENSPCOG00000017673	CNOT3	93	84.615	Propithecus_coquereli
ENSOMEG00000015557	cnot3b	71	83.136	ENSPVAG00000015564	CNOT3	70	89.836	Pteropus_vampyrus
ENSOMEG00000015557	cnot3b	99	73.758	ENSPNYG00000003358	cnot3b	99	73.326	Pundamilia_nyererei
ENSOMEG00000015557	cnot3b	79	82.437	ENSPNAG00000017679	cnot3a	85	92.500	Pygocentrus_nattereri
ENSOMEG00000015557	cnot3b	100	70.982	ENSPNAG00000027459	cnot3b	100	72.530	Pygocentrus_nattereri
ENSOMEG00000015557	cnot3b	72	83.382	ENSRNOG00000053234	Cnot3	94	84.950	Rattus_norvegicus
ENSOMEG00000015557	cnot3b	68	91.118	ENSRBIG00000031025	CNOT3	94	84.615	Rhinopithecus_bieti
ENSOMEG00000015557	cnot3b	68	91.118	ENSRROG00000003872	CNOT3	95	84.615	Rhinopithecus_roxellana
ENSOMEG00000015557	cnot3b	85	78.550	ENSSBOG00000030268	CNOT3	93	84.615	Saimiri_boliviensis_boliviensis
ENSOMEG00000015557	cnot3b	100	70.626	ENSSFOG00015019203	-	100	70.247	Scleropages_formosus
ENSOMEG00000015557	cnot3b	100	71.041	ENSSFOG00015000248	cnot3	100	70.982	Scleropages_formosus
ENSOMEG00000015557	cnot3b	100	78.875	ENSSMAG00000016031	cnot3b	100	78.662	Scophthalmus_maximus
ENSOMEG00000015557	cnot3b	100	82.535	ENSSDUG00000003428	cnot3b	100	82.109	Seriola_dumerili
ENSOMEG00000015557	cnot3b	82	93.913	ENSSDUG00000008181	cnot3a	100	87.786	Seriola_dumerili
ENSOMEG00000015557	cnot3b	100	82.322	ENSSLDG00000014376	cnot3b	100	81.896	Seriola_lalandi_dorsalis
ENSOMEG00000015557	cnot3b	69	79.787	ENSSPUG00000008510	CNOT3	97	90.820	Sphenodon_punctatus
ENSOMEG00000015557	cnot3b	100	82.655	ENSSPAG00000001429	cnot3b	100	82.762	Stegastes_partitus
ENSOMEG00000015557	cnot3b	87	91.339	ENSSPAG00000003858	cnot3a	92	91.339	Stegastes_partitus
ENSOMEG00000015557	cnot3b	68	91.118	ENSSSCG00000003264	CNOT3	93	84.615	Sus_scrofa
ENSOMEG00000015557	cnot3b	100	74.902	ENSTRUG00000007248	cnot3b	91	90.206	Takifugu_rubripes
ENSOMEG00000015557	cnot3b	94	63.711	ENSTNIG00000008082	cnot3a	100	64.171	Tetraodon_nigroviridis
ENSOMEG00000015557	cnot3b	94	75.314	ENSTNIG00000005663	cnot3b	100	76.674	Tetraodon_nigroviridis
ENSOMEG00000015557	cnot3b	68	91.447	ENSUAMG00000005234	CNOT3	91	84.950	Ursus_americanus
ENSOMEG00000015557	cnot3b	61	88.768	ENSUMAG00000010934	CNOT3	99	88.768	Ursus_maritimus
ENSOMEG00000015557	cnot3b	68	91.118	ENSVVUG00000008239	CNOT3	91	84.615	Vulpes_vulpes
ENSOMEG00000015557	cnot3b	69	88.141	ENSXETG00000003166	cnot3	97	89.968	Xenopus_tropicalis
ENSOMEG00000015557	cnot3b	100	64.764	ENSXCOG00000019460	cnot3a	96	94.690	Xiphophorus_couchianus
ENSOMEG00000015557	cnot3b	96	76.715	ENSXCOG00000018976	cnot3b	99	77.365	Xiphophorus_couchianus
ENSOMEG00000015557	cnot3b	100	81.630	ENSXMAG00000014176	cnot3b	100	82.372	Xiphophorus_maculatus
ENSOMEG00000015557	cnot3b	100	66.268	ENSXMAG00000012273	cnot3a	100	66.060	Xiphophorus_maculatus