EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOMEG00000015641 (Gene tree)
Gene ID: 112142510
Gene Symbol: tfb1m
Alias: -
Full Name: transcription factor B1%2C mitochondrial
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 36726 bases
Position: chrNVQA01000001.1:16904158-16940883
Accession: 112142510
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000014138	RrnaAD	PF00398.20	3.8e-38	1	1
ENSOMEP00000014159	RrnaAD	PF00398.20	3.8e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000021964	-	1252	-	ENSOMEP00000014138	352 (aa)	XP_024121714	UPI000CF7E6BA
ENSOMET00000021979	-	1252	-	ENSOMEP00000014159	352 (aa)	XP_024121714	UPI000CF7E6BA

Gene Model

Click here to download ENSOMEG00000015641's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000015641's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000015641	tfb1m	94	68.788	ENSG00000029639	TFB1M	95	68.788	Homo_sapiens
ENSOMEG00000015641	tfb1m	99	83.954	ENSAPOG00000015493	tfb1m	98	83.954	Acanthochromis_polyacanthus
ENSOMEG00000015641	tfb1m	94	67.879	ENSAMEG00000012761	TFB1M	95	67.879	Ailuropoda_melanoleuca
ENSOMEG00000015641	tfb1m	98	84.638	ENSACIG00000014290	tfb1m	98	84.638	Amphilophus_citrinellus
ENSOMEG00000015641	tfb1m	99	84.527	ENSAOCG00000004027	tfb1m	98	84.527	Amphiprion_ocellaris
ENSOMEG00000015641	tfb1m	99	85.100	ENSAPEG00000020359	tfb1m	98	85.100	Amphiprion_percula
ENSOMEG00000015641	tfb1m	93	86.626	ENSATEG00000006826	tfb1m	93	86.626	Anabas_testudineus
ENSOMEG00000015641	tfb1m	94	70.606	ENSAPLG00000006328	TFB1M	95	70.606	Anas_platyrhynchos
ENSOMEG00000015641	tfb1m	94	71.818	ENSACAG00000005244	TFB1M	96	71.818	Anolis_carolinensis
ENSOMEG00000015641	tfb1m	93	70.336	ENSANAG00000021469	TFB1M	96	69.697	Aotus_nancymaae
ENSOMEG00000015641	tfb1m	97	88.824	ENSACLG00000018734	tfb1m	94	88.824	Astatotilapia_calliptera
ENSOMEG00000015641	tfb1m	94	80.909	ENSAMXG00000036128	tfb1m	90	80.909	Astyanax_mexicanus
ENSOMEG00000015641	tfb1m	93	71.125	ENSBTAG00000031895	TFB1M	98	75.225	Bos_taurus
ENSOMEG00000015641	tfb1m	91	44.479	WBGene00020189	tfbm-1	88	44.479	Caenorhabditis_elegans
ENSOMEG00000015641	tfb1m	94	69.697	ENSCJAG00000012540	TFB1M	96	69.697	Callithrix_jacchus
ENSOMEG00000015641	tfb1m	93	70.031	ENSCAFG00000000581	TFB1M	95	70.031	Canis_familiaris
ENSOMEG00000015641	tfb1m	93	70.031	ENSCAFG00020015224	TFB1M	95	70.031	Canis_lupus_dingo
ENSOMEG00000015641	tfb1m	93	71.125	ENSCHIG00000017013	TFB1M	99	71.125	Capra_hircus
ENSOMEG00000015641	tfb1m	93	71.254	ENSTSYG00000012298	TFB1M	95	71.254	Carlito_syrichta
ENSOMEG00000015641	tfb1m	67	49.362	ENSCAPG00000013843	TFB1M	78	49.362	Cavia_aperea
ENSOMEG00000015641	tfb1m	94	68.788	ENSCPOG00000030422	TFB1M	95	68.788	Cavia_porcellus
ENSOMEG00000015641	tfb1m	94	70.000	ENSCCAG00000015250	TFB1M	96	70.000	Cebus_capucinus
ENSOMEG00000015641	tfb1m	94	48.036	ENSCATG00000009009	TFB1M	95	48.036	Cercocebus_atys
ENSOMEG00000015641	tfb1m	94	70.000	ENSCLAG00000004500	TFB1M	96	70.000	Chinchilla_lanigera
ENSOMEG00000015641	tfb1m	92	69.350	ENSCSAG00000013259	TFB1M	95	69.091	Chlorocebus_sabaeus
ENSOMEG00000015641	tfb1m	93	69.207	ENSCHOG00000011245	TFB1M	95	69.207	Choloepus_hoffmanni
ENSOMEG00000015641	tfb1m	92	74.691	ENSCPBG00000016320	TFB1M	95	74.691	Chrysemys_picta_bellii
ENSOMEG00000015641	tfb1m	87	46.580	ENSCING00000003901	-	80	46.580	Ciona_intestinalis
ENSOMEG00000015641	tfb1m	87	48.860	ENSCSAVG00000004721	-	80	48.860	Ciona_savignyi
ENSOMEG00000015641	tfb1m	94	69.697	ENSCANG00000029768	TFB1M	98	69.697	Colobus_angolensis_palliatus
ENSOMEG00000015641	tfb1m	94	69.091	ENSCGRG00001022866	Tfb1m	96	69.091	Cricetulus_griseus_chok1gshd
ENSOMEG00000015641	tfb1m	89	69.524	ENSCGRG00000018084	Tfb1m	96	69.524	Cricetulus_griseus_crigri
ENSOMEG00000015641	tfb1m	100	80.170	ENSCSEG00000000131	tfb1m	100	79.320	Cynoglossus_semilaevis
ENSOMEG00000015641	tfb1m	100	82.386	ENSCVAG00000009201	tfb1m	100	82.386	Cyprinodon_variegatus
ENSOMEG00000015641	tfb1m	93	76.900	ENSDARG00000040727	tfb1m	98	81.061	Danio_rerio
ENSOMEG00000015641	tfb1m	80	60.993	ENSDNOG00000032672	-	98	60.993	Dasypus_novemcinctus
ENSOMEG00000015641	tfb1m	100	65.826	ENSDNOG00000015984	-	98	65.826	Dasypus_novemcinctus
ENSOMEG00000015641	tfb1m	94	69.697	ENSDORG00000012938	Tfb1m	95	69.697	Dipodomys_ordii
ENSOMEG00000015641	tfb1m	90	48.125	FBgn0261381	mtTFB1	95	48.125	Drosophila_melanogaster
ENSOMEG00000015641	tfb1m	93	49.695	ENSETEG00000005709	TFB1M	94	49.695	Echinops_telfairi
ENSOMEG00000015641	tfb1m	91	55.172	ENSEBUG00000010530	tfb1m	92	55.140	Eptatretus_burgeri
ENSOMEG00000015641	tfb1m	93	70.642	ENSEASG00005018887	TFB1M	94	70.642	Equus_asinus_asinus
ENSOMEG00000015641	tfb1m	93	71.254	ENSECAG00000020997	TFB1M	94	71.254	Equus_caballus
ENSOMEG00000015641	tfb1m	93	71.560	ENSEEUG00000014899	TFB1M	97	71.560	Erinaceus_europaeus
ENSOMEG00000015641	tfb1m	94	81.928	ENSELUG00000002752	tfb1m	84	81.928	Esox_lucius
ENSOMEG00000015641	tfb1m	93	69.419	ENSFCAG00000038785	TFB1M	95	69.419	Felis_catus
ENSOMEG00000015641	tfb1m	94	68.882	ENSFALG00000012500	TFB1M	95	68.882	Ficedula_albicollis
ENSOMEG00000015641	tfb1m	91	70.938	ENSFDAG00000016985	TFB1M	95	70.370	Fukomys_damarensis
ENSOMEG00000015641	tfb1m	100	82.955	ENSFHEG00000008407	tfb1m	100	82.955	Fundulus_heteroclitus
ENSOMEG00000015641	tfb1m	97	82.609	ENSGMOG00000018738	tfb1m	99	82.609	Gadus_morhua
ENSOMEG00000015641	tfb1m	93	71.472	ENSGALG00000013647	TFB1M	93	71.472	Gallus_gallus
ENSOMEG00000015641	tfb1m	100	82.386	ENSGAFG00000017997	tfb1m	100	82.386	Gambusia_affinis
ENSOMEG00000015641	tfb1m	98	84.012	ENSGACG00000006884	tfb1m	97	84.012	Gasterosteus_aculeatus
ENSOMEG00000015641	tfb1m	94	73.333	ENSGAGG00000025345	TFB1M	96	73.333	Gopherus_agassizii
ENSOMEG00000015641	tfb1m	94	68.788	ENSGGOG00000012189	TFB1M	95	68.788	Gorilla_gorilla
ENSOMEG00000015641	tfb1m	97	88.529	ENSHBUG00000019396	tfb1m	94	88.529	Haplochromis_burtoni
ENSOMEG00000015641	tfb1m	94	70.000	ENSHGLG00000002028	TFB1M	95	70.000	Heterocephalus_glaber_female
ENSOMEG00000015641	tfb1m	94	70.000	ENSHGLG00100001412	TFB1M	95	70.000	Heterocephalus_glaber_male
ENSOMEG00000015641	tfb1m	94	82.779	ENSHCOG00000014135	tfb1m	95	82.779	Hippocampus_comes
ENSOMEG00000015641	tfb1m	94	76.667	ENSIPUG00000010964	tfb1m	97	76.667	Ictalurus_punctatus
ENSOMEG00000015641	tfb1m	94	70.303	ENSSTOG00000026264	TFB1M	96	70.303	Ictidomys_tridecemlineatus
ENSOMEG00000015641	tfb1m	94	70.303	ENSJJAG00000022171	Tfb1m	93	70.303	Jaculus_jaculus
ENSOMEG00000015641	tfb1m	100	82.670	ENSKMAG00000012667	tfb1m	100	82.670	Kryptolebias_marmoratus
ENSOMEG00000015641	tfb1m	94	88.218	ENSLBEG00000011505	tfb1m	93	88.218	Labrus_bergylta
ENSOMEG00000015641	tfb1m	94	76.364	ENSLACG00000012594	TFB1M	94	76.364	Latimeria_chalumnae
ENSOMEG00000015641	tfb1m	94	71.856	ENSLOCG00000016850	tfb1m	95	71.856	Lepisosteus_oculatus
ENSOMEG00000015641	tfb1m	91	58.075	ENSLAFG00000032309	-	100	58.075	Loxodonta_africana
ENSOMEG00000015641	tfb1m	93	69.939	ENSLAFG00000014035	-	95	69.725	Loxodonta_africana
ENSOMEG00000015641	tfb1m	94	69.184	ENSMFAG00000031968	TFB1M	96	69.184	Macaca_fascicularis
ENSOMEG00000015641	tfb1m	94	69.486	ENSMMUG00000011171	TFB1M	96	69.486	Macaca_mulatta
ENSOMEG00000015641	tfb1m	94	69.184	ENSMNEG00000042278	TFB1M	96	69.184	Macaca_nemestrina
ENSOMEG00000015641	tfb1m	94	69.697	ENSMLEG00000000044	TFB1M	96	69.697	Mandrillus_leucophaeus
ENSOMEG00000015641	tfb1m	99	82.336	ENSMAMG00000009423	tfb1m	99	82.336	Mastacembelus_armatus
ENSOMEG00000015641	tfb1m	97	88.824	ENSMZEG00005005640	tfb1m	90	88.824	Maylandia_zebra
ENSOMEG00000015641	tfb1m	75	76.981	ENSMGAG00000012779	TFB1M	100	76.981	Meleagris_gallopavo
ENSOMEG00000015641	tfb1m	94	71.818	ENSMAUG00000006705	Tfb1m	96	71.818	Mesocricetus_auratus
ENSOMEG00000015641	tfb1m	93	72.477	ENSMICG00000045849	TFB1M	95	72.477	Microcebus_murinus
ENSOMEG00000015641	tfb1m	93	71.779	ENSMOCG00000013879	Tfb1m	97	71.045	Microtus_ochrogaster
ENSOMEG00000015641	tfb1m	99	84.330	ENSMMOG00000002203	tfb1m	98	84.330	Mola_mola
ENSOMEG00000015641	tfb1m	93	71.166	ENSMODG00000008169	TFB1M	96	70.606	Monodelphis_domestica
ENSOMEG00000015641	tfb1m	95	86.186	ENSMALG00000011657	tfb1m	88	86.186	Monopterus_albus
ENSOMEG00000015641	tfb1m	94	69.394	MGP_CAROLIEiJ_G0021018	Tfb1m	96	69.394	Mus_caroli
ENSOMEG00000015641	tfb1m	94	69.394	ENSMUSG00000036983	Tfb1m	96	69.394	Mus_musculus
ENSOMEG00000015641	tfb1m	93	70.552	MGP_PahariEiJ_G0023336	Tfb1m	96	70.000	Mus_pahari
ENSOMEG00000015641	tfb1m	94	69.394	MGP_SPRETEiJ_G0021923	Tfb1m	96	69.394	Mus_spretus
ENSOMEG00000015641	tfb1m	93	69.725	ENSMPUG00000002073	TFB1M	95	69.725	Mustela_putorius_furo
ENSOMEG00000015641	tfb1m	97	69.412	ENSMLUG00000011329	TFB1M	98	69.412	Myotis_lucifugus
ENSOMEG00000015641	tfb1m	94	69.091	ENSNGAG00000015154	Tfb1m	93	69.091	Nannospalax_galili
ENSOMEG00000015641	tfb1m	97	88.235	ENSNBRG00000009004	tfb1m	95	88.235	Neolamprologus_brichardi
ENSOMEG00000015641	tfb1m	94	69.091	ENSNLEG00000034352	TFB1M	95	69.091	Nomascus_leucogenys
ENSOMEG00000015641	tfb1m	93	58.410	ENSMEUG00000001699	-	94	58.410	Notamacropus_eugenii
ENSOMEG00000015641	tfb1m	93	53.823	ENSOPRG00000008921	TFB1M	96	53.823	Ochotona_princeps
ENSOMEG00000015641	tfb1m	92	69.350	ENSODEG00000005915	TFB1M	94	69.350	Octodon_degus
ENSOMEG00000015641	tfb1m	97	88.824	ENSONIG00000008109	tfb1m	98	88.824	Oreochromis_niloticus
ENSOMEG00000015641	tfb1m	93	70.336	ENSOCUG00000012154	TFB1M	96	70.336	Oryctolagus_cuniculus
ENSOMEG00000015641	tfb1m	97	92.669	ENSORLG00000017328	tfb1m	83	92.669	Oryzias_latipes
ENSOMEG00000015641	tfb1m	97	92.082	ENSORLG00020002250	tfb1m	99	92.082	Oryzias_latipes_hni
ENSOMEG00000015641	tfb1m	97	92.082	ENSORLG00015016067	tfb1m	99	92.082	Oryzias_latipes_hsok
ENSOMEG00000015641	tfb1m	94	67.976	ENSOGAG00000011681	TFB1M	96	67.976	Otolemur_garnettii
ENSOMEG00000015641	tfb1m	93	69.552	ENSOARG00000004216	TFB1M	99	69.552	Ovis_aries
ENSOMEG00000015641	tfb1m	94	68.788	ENSPPAG00000030834	TFB1M	95	68.788	Pan_paniscus
ENSOMEG00000015641	tfb1m	93	69.113	ENSPPRG00000013578	TFB1M	95	69.113	Panthera_pardus
ENSOMEG00000015641	tfb1m	93	69.113	ENSPTIG00000003540	TFB1M	95	69.113	Panthera_tigris_altaica
ENSOMEG00000015641	tfb1m	94	68.485	ENSPTRG00000018730	TFB1M	95	68.485	Pan_troglodytes
ENSOMEG00000015641	tfb1m	94	69.486	ENSPANG00000007489	TFB1M	96	69.486	Papio_anubis
ENSOMEG00000015641	tfb1m	93	77.812	ENSPKIG00000021117	tfb1m	94	77.812	Paramormyrops_kingsleyae
ENSOMEG00000015641	tfb1m	94	73.030	ENSPSIG00000006643	TFB1M	96	73.030	Pelodiscus_sinensis
ENSOMEG00000015641	tfb1m	93	86.544	ENSPMGG00000011289	tfb1m	94	86.544	Periophthalmus_magnuspinnatus
ENSOMEG00000015641	tfb1m	94	70.303	ENSPEMG00000010410	Tfb1m	96	70.303	Peromyscus_maniculatus_bairdii
ENSOMEG00000015641	tfb1m	56	62.437	ENSPMAG00000008056	tfb1m	90	62.189	Petromyzon_marinus
ENSOMEG00000015641	tfb1m	94	70.091	ENSPCIG00000001010	TFB1M	92	70.091	Phascolarctos_cinereus
ENSOMEG00000015641	tfb1m	100	81.921	ENSPFOG00000005139	tfb1m	100	81.921	Poecilia_formosa
ENSOMEG00000015641	tfb1m	100	81.818	ENSPLAG00000021410	tfb1m	100	81.818	Poecilia_latipinna
ENSOMEG00000015641	tfb1m	100	82.102	ENSPMEG00000020166	tfb1m	100	82.102	Poecilia_mexicana
ENSOMEG00000015641	tfb1m	100	81.534	ENSPREG00000022392	tfb1m	100	81.534	Poecilia_reticulata
ENSOMEG00000015641	tfb1m	94	66.767	ENSPPYG00000017123	TFB1M	96	66.767	Pongo_abelii
ENSOMEG00000015641	tfb1m	81	57.895	ENSPCAG00000007078	TFB1M	95	57.895	Procavia_capensis
ENSOMEG00000015641	tfb1m	99	68.391	ENSPCOG00000028453	TFB1M	99	68.391	Propithecus_coquereli
ENSOMEG00000015641	tfb1m	93	71.560	ENSPVAG00000015818	TFB1M	95	71.560	Pteropus_vampyrus
ENSOMEG00000015641	tfb1m	97	88.529	ENSPNYG00000007330	tfb1m	94	88.529	Pundamilia_nyererei
ENSOMEG00000015641	tfb1m	93	79.027	ENSPNAG00000007507	tfb1m	93	79.027	Pygocentrus_nattereri
ENSOMEG00000015641	tfb1m	94	70.606	ENSRNOG00000056223	Tfb1m	96	70.606	Rattus_norvegicus
ENSOMEG00000015641	tfb1m	94	69.697	ENSRBIG00000039975	TFB1M	98	69.697	Rhinopithecus_bieti
ENSOMEG00000015641	tfb1m	94	69.394	ENSRROG00000033802	TFB1M	98	69.394	Rhinopithecus_roxellana
ENSOMEG00000015641	tfb1m	94	70.000	ENSSBOG00000008663	TFB1M	96	70.000	Saimiri_boliviensis_boliviensis
ENSOMEG00000015641	tfb1m	91	62.112	ENSSHAG00000013259	TFB1M	94	62.112	Sarcophilus_harrisii
ENSOMEG00000015641	tfb1m	99	75.358	ENSSFOG00015009739	tfb1m	99	75.358	Scleropages_formosus
ENSOMEG00000015641	tfb1m	98	84.928	ENSSMAG00000008229	tfb1m	98	84.928	Scophthalmus_maximus
ENSOMEG00000015641	tfb1m	99	83.476	ENSSDUG00000011871	tfb1m	98	83.476	Seriola_dumerili
ENSOMEG00000015641	tfb1m	99	83.191	ENSSLDG00000023923	tfb1m	98	83.191	Seriola_lalandi_dorsalis
ENSOMEG00000015641	tfb1m	63	73.874	ENSSARG00000003159	TFB1M	100	73.874	Sorex_araneus
ENSOMEG00000015641	tfb1m	94	69.578	ENSSPUG00000015253	TFB1M	96	69.578	Sphenodon_punctatus
ENSOMEG00000015641	tfb1m	99	85.387	ENSSPAG00000019515	tfb1m	98	85.387	Stegastes_partitus
ENSOMEG00000015641	tfb1m	93	70.948	ENSSSCG00000024361	TFB1M	96	70.948	Sus_scrofa
ENSOMEG00000015641	tfb1m	94	69.486	ENSTGUG00000011136	TFB1M	96	69.486	Taeniopygia_guttata
ENSOMEG00000015641	tfb1m	99	85.879	ENSTRUG00000020334	tfb1m	97	85.879	Takifugu_rubripes
ENSOMEG00000015641	tfb1m	62	88.128	ENSTNIG00000016882	tfb1m	97	88.128	Tetraodon_nigroviridis
ENSOMEG00000015641	tfb1m	93	68.502	ENSTBEG00000008769	TFB1M	94	68.502	Tupaia_belangeri
ENSOMEG00000015641	tfb1m	93	70.948	ENSTTRG00000006327	TFB1M	97	70.948	Tursiops_truncatus
ENSOMEG00000015641	tfb1m	93	68.405	ENSUAMG00000017802	TFB1M	94	67.879	Ursus_americanus
ENSOMEG00000015641	tfb1m	94	68.485	ENSUMAG00000013377	TFB1M	86	68.485	Ursus_maritimus
ENSOMEG00000015641	tfb1m	94	70.181	ENSVPAG00000010148	TFB1M	98	70.181	Vicugna_pacos
ENSOMEG00000015641	tfb1m	93	69.419	ENSVVUG00000007643	TFB1M	96	69.419	Vulpes_vulpes
ENSOMEG00000015641	tfb1m	94	73.716	ENSXETG00000007852	tfb1m	96	73.716	Xenopus_tropicalis
ENSOMEG00000015641	tfb1m	100	82.670	ENSXCOG00000013230	tfb1m	100	82.670	Xiphophorus_couchianus
ENSOMEG00000015641	tfb1m	100	82.670	ENSXMAG00000019222	tfb1m	100	82.670	Xiphophorus_maculatus