EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSOMEG00000015656 (Gene tree)
Gene ID
112159561
Gene Symbol
csde1
Alias
-
Full Name
cold shock domain containing E1
Gene Type
protein_coding
Species
Oryzias_melastigma
Status
putative
Strand
Minus strand
Length
28428 bases
Position
chrNVQA01000024.1:1243720-1272147
Accession
112159561
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSOMEP00000014069CSDPF00313.229.9e-8215
ENSOMEP00000014069CSDPF00313.229.9e-8225
ENSOMEP00000014069CSDPF00313.229.9e-8235
ENSOMEP00000014069CSDPF00313.229.9e-8245
ENSOMEP00000014069CSDPF00313.229.9e-8255
ENSOMEP00000014115CSDPF00313.222.6e-8115
ENSOMEP00000014115CSDPF00313.222.6e-8125
ENSOMEP00000014115CSDPF00313.222.6e-8135
ENSOMEP00000014115CSDPF00313.222.6e-8145
ENSOMEP00000014115CSDPF00313.222.6e-8155
ENSOMEP00000030990CSDPF00313.223.5e-8115
ENSOMEP00000030990CSDPF00313.223.5e-8125
ENSOMEP00000030990CSDPF00313.223.5e-8135
ENSOMEP00000030990CSDPF00313.223.5e-8145
ENSOMEP00000030990CSDPF00313.223.5e-8155
ENSOMEP00000031024CSDPF00313.225.2e-8115
ENSOMEP00000031024CSDPF00313.225.2e-8125
ENSOMEP00000031024CSDPF00313.225.2e-8135
ENSOMEP00000031024CSDPF00313.225.2e-8145
ENSOMEP00000031024CSDPF00313.225.2e-8155
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSOMET00000021893-4908-ENSOMEP00000030990839 (aa)--
ENSOMET00000033402-2301-ENSOMEP00000014069766 (aa)--
ENSOMET00000021970-5222-ENSOMEP00000031024869 (aa)XP_024149481UPI000CF7CF7F
ENSOMET00000033424-5033-ENSOMEP00000014115816 (aa)--
Gene Model
Click here to download ENSOMEG00000015656's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000015656's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSOMEG00000015656csde110078.052ENSG00000009307CSDE110083.824Homo_sapiens
ENSOMEG00000015656csde110092.034ENSAPOG00000015538csde110091.797Acanthochromis_polyacanthus
ENSOMEG00000015656csde110077.403ENSAMEG00000017129CSDE19477.403Ailuropoda_melanoleuca
ENSOMEG00000015656csde19091.081ENSACIG00000015175csde110091.081Amphilophus_citrinellus
ENSOMEG00000015656csde110091.789ENSAOCG00000011510csde110091.536Amphiprion_ocellaris
ENSOMEG00000015656csde110091.912ENSAPEG00000007194csde110091.912Amphiprion_percula
ENSOMEG00000015656csde110090.897ENSATEG00000003864csde110090.117Anabas_testudineus
ENSOMEG00000015656csde110079.454ENSAPLG00000008797CSDE110079.454Anas_platyrhynchos
ENSOMEG00000015656csde110077.045ENSACAG00000003120CSDE110078.875Anolis_carolinensis
ENSOMEG00000015656csde19061.484ENSANAG00000028396-9362.373Aotus_nancymaae
ENSOMEG00000015656csde110077.922ENSANAG00000024665CSDE19875.510Aotus_nancymaae
ENSOMEG00000015656csde110091.678ENSACLG00000013296csde110090.977Astatotilapia_calliptera
ENSOMEG00000015656csde110084.695ENSAMXG00000007436csde110084.047Astyanax_mexicanus
ENSOMEG00000015656csde110078.442ENSBTAG00000000678CSDE110078.442Bos_taurus
ENSOMEG00000015656csde110077.922ENSCJAG00000012565CSDE19875.630Callithrix_jacchus
ENSOMEG00000015656csde19878.647ENSCAFG00000009618CSDE19478.647Canis_familiaris
ENSOMEG00000015656csde110078.442ENSCAFG00020000481CSDE110078.442Canis_lupus_dingo
ENSOMEG00000015656csde110078.312ENSCHIG00000017250CSDE110078.312Capra_hircus
ENSOMEG00000015656csde110078.052ENSTSYG00000003747CSDE110078.052Carlito_syrichta
ENSOMEG00000015656csde19577.301ENSCAPG00000015128CSDE110077.301Cavia_aperea
ENSOMEG00000015656csde110072.727ENSCPOG00000040388CSDE110073.967Cavia_porcellus
ENSOMEG00000015656csde110077.922ENSCCAG00000036794CSDE110077.403Cebus_capucinus
ENSOMEG00000015656csde19755.457ENSCCAG00000030878-9155.679Cebus_capucinus
ENSOMEG00000015656csde19557.820ENSCCAG00000033677-9956.532Cebus_capucinus
ENSOMEG00000015656csde110078.052ENSCATG00000036962CSDE19778.052Cercocebus_atys
ENSOMEG00000015656csde110078.442ENSCLAG00000006618CSDE110078.442Chinchilla_lanigera
ENSOMEG00000015656csde110075.732ENSCSAG00000001658CSDE19875.750Chlorocebus_sabaeus
ENSOMEG00000015656csde110082.524ENSCHOG00000000918CSDE18980.488Choloepus_hoffmanni
ENSOMEG00000015656csde110079.454ENSCPBG00000016547CSDE110079.454Chrysemys_picta_bellii
ENSOMEG00000015656csde19843.473ENSCING00000014465-9843.463Ciona_intestinalis
ENSOMEG00000015656csde19741.923ENSCSAVG00000008100-10041.928Ciona_savignyi
ENSOMEG00000015656csde18879.775ENSCANG00000031069-9479.336Colobus_angolensis_palliatus
ENSOMEG00000015656csde110078.052ENSCANG00000035096CSDE19778.052Colobus_angolensis_palliatus
ENSOMEG00000015656csde110077.532ENSCGRG00001016833-10077.532Cricetulus_griseus_chok1gshd
ENSOMEG00000015656csde110063.766ENSCGRG00001014011-10063.766Cricetulus_griseus_chok1gshd
ENSOMEG00000015656csde110073.043ENSCGRG00000005831-10073.043Cricetulus_griseus_crigri
ENSOMEG00000015656csde19774.222ENSCGRG00000002225-10074.444Cricetulus_griseus_crigri
ENSOMEG00000015656csde110089.857ENSCSEG00000002620csde110089.207Cynoglossus_semilaevis
ENSOMEG00000015656csde110090.117ENSCVAG00000001344csde110089.337Cyprinodon_variegatus
ENSOMEG00000015656csde110084.597ENSDARG00000074758csde110086.691Danio_rerio
ENSOMEG00000015656csde16252.471ENSDNOG00000034464-9958.537Dasypus_novemcinctus
ENSOMEG00000015656csde110078.470ENSDNOG00000010287-9378.470Dasypus_novemcinctus
ENSOMEG00000015656csde110075.366ENSDORG00000011609Csde110077.154Dipodomys_ordii
ENSOMEG00000015656csde19948.126FBgn0263352Unr8448.104Drosophila_melanogaster
ENSOMEG00000015656csde17954.366ENSETEG00000007109-9954.366Echinops_telfairi
ENSOMEG00000015656csde110073.199ENSETEG00000002491-8672.911Echinops_telfairi
ENSOMEG00000015656csde19960.547ENSETEG00000013678-9960.547Echinops_telfairi
ENSOMEG00000015656csde19069.352ENSETEG00000006280-9969.352Echinops_telfairi
ENSOMEG00000015656csde19953.791ENSEBUG00000008647csde19953.222Eptatretus_burgeri
ENSOMEG00000015656csde110078.442ENSEASG00005006284CSDE110077.903Equus_asinus_asinus
ENSOMEG00000015656csde110078.442ENSECAG00000020885CSDE110077.903Equus_caballus
ENSOMEG00000015656csde19381.620ENSEEUG00000006286CSDE16881.620Erinaceus_europaeus
ENSOMEG00000015656csde110086.441ENSELUG00000015507csde110084.476Esox_lucius
ENSOMEG00000015656csde110078.442ENSFCAG00000029266CSDE110078.442Felis_catus
ENSOMEG00000015656csde110076.679ENSFALG00000003407CSDE110078.500Ficedula_albicollis
ENSOMEG00000015656csde19977.061ENSFDAG00000007882CSDE110077.278Fukomys_damarensis
ENSOMEG00000015656csde19890.331ENSFHEG00000010799csde110089.474Fundulus_heteroclitus
ENSOMEG00000015656csde19984.700ENSGMOG00000012731csde110086.717Gadus_morhua
ENSOMEG00000015656csde19876.990ENSGALG00000002139CSDE19878.854Gallus_gallus
ENSOMEG00000015656csde19490.076ENSGAFG00000005241csde19589.160Gambusia_affinis
ENSOMEG00000015656csde19988.358ENSGACG00000004544csde110090.464Gasterosteus_aculeatus
ENSOMEG00000015656csde110079.454ENSGAGG00000017685CSDE110078.875Gopherus_agassizii
ENSOMEG00000015656csde110078.052ENSGGOG00000002164CSDE110078.052Gorilla_gorilla
ENSOMEG00000015656csde110091.922ENSHBUG00000020315csde110090.897Haplochromis_burtoni
ENSOMEG00000015656csde19967.366ENSHGLG00000007471-9867.366Heterocephalus_glaber_female
ENSOMEG00000015656csde19961.002ENSHGLG00000000650-9962.453Heterocephalus_glaber_female
ENSOMEG00000015656csde19768.666ENSHGLG00000008555-10068.703Heterocephalus_glaber_female
ENSOMEG00000015656csde110071.484ENSHGLG00000009620-10071.745Heterocephalus_glaber_female
ENSOMEG00000015656csde19767.333ENSHGLG00000010039-10067.556Heterocephalus_glaber_female
ENSOMEG00000015656csde110063.396ENSHGLG00000019549-10064.411Heterocephalus_glaber_female
ENSOMEG00000015656csde110070.130ENSHGLG00000003829-10070.130Heterocephalus_glaber_female
ENSOMEG00000015656csde110063.636ENSHGLG00100001846-10063.329Heterocephalus_glaber_male
ENSOMEG00000015656csde19761.830ENSHGLG00100004833-10061.830Heterocephalus_glaber_male
ENSOMEG00000015656csde19767.111ENSHGLG00100006910-10067.333Heterocephalus_glaber_male
ENSOMEG00000015656csde110065.974ENSHGLG00100012072-10065.974Heterocephalus_glaber_male
ENSOMEG00000015656csde19366.203ENSHGLG00100004195-10065.925Heterocephalus_glaber_male
ENSOMEG00000015656csde110078.052ENSHGLG00100019438-10078.052Heterocephalus_glaber_male
ENSOMEG00000015656csde19965.580ENSHGLG00100007287-9865.580Heterocephalus_glaber_male
ENSOMEG00000015656csde19964.677ENSHGLG00100002245-9966.209Heterocephalus_glaber_male
ENSOMEG00000015656csde110089.077ENSHCOG00000004158csde110088.557Hippocampus_comes
ENSOMEG00000015656csde110084.436ENSIPUG00000000355csde110084.436Ictalurus_punctatus
ENSOMEG00000015656csde110064.541ENSSTOG00000030994-10064.413Ictidomys_tridecemlineatus
ENSOMEG00000015656csde19364.271ENSSTOG00000032722-9864.479Ictidomys_tridecemlineatus
ENSOMEG00000015656csde110075.488ENSJJAG00000019571Csde110076.500Jaculus_jaculus
ENSOMEG00000015656csde110088.307ENSKMAG00000005685csde110089.330Kryptolebias_marmoratus
ENSOMEG00000015656csde110091.310ENSLBEG00000014770csde110091.157Labrus_bergylta
ENSOMEG00000015656csde110073.494ENSLACG00000018452CSDE19872.577Latimeria_chalumnae
ENSOMEG00000015656csde110082.108ENSLOCG00000010413csde110079.449Lepisosteus_oculatus
ENSOMEG00000015656csde110077.922ENSLAFG00000007150CSDE19677.922Loxodonta_africana
ENSOMEG00000015656csde110078.052ENSMFAG00000003674CSDE110078.052Macaca_fascicularis
ENSOMEG00000015656csde110078.052ENSMMUG00000001974CSDE110078.052Macaca_mulatta
ENSOMEG00000015656csde110078.052ENSMNEG00000045247CSDE19778.052Macaca_nemestrina
ENSOMEG00000015656csde110077.792ENSMLEG00000038673CSDE19875.510Mandrillus_leucophaeus
ENSOMEG00000015656csde110092.188ENSMAMG00000008821csde110092.188Mastacembelus_armatus
ENSOMEG00000015656csde110091.678ENSMZEG00005021675csde110090.897Maylandia_zebra
ENSOMEG00000015656csde110079.481ENSMGAG00000016381CSDE110079.481Meleagris_gallopavo
ENSOMEG00000015656csde110075.244ENSMAUG00000014031Csde110077.029Mesocricetus_auratus
ENSOMEG00000015656csde110078.442ENSMICG00000002050CSDE19975.278Microcebus_murinus
ENSOMEG00000015656csde110077.532ENSMOCG00000018960Csde110077.532Microtus_ochrogaster
ENSOMEG00000015656csde110091.808ENSMMOG00000015075csde110091.027Mola_mola
ENSOMEG00000015656csde110078.238ENSMODG00000004685CSDE110078.402Monodelphis_domestica
ENSOMEG00000015656csde110092.198ENSMALG00000007132csde110091.547Monopterus_albus
ENSOMEG00000015656csde110077.403MGP_CAROLIEiJ_G0025444Csde110083.444Mus_caroli
ENSOMEG00000015656csde110077.662ENSMUSG00000068823Csde110083.444Mus_musculus
ENSOMEG00000015656csde110077.662MGP_PahariEiJ_G0026888Csde110083.444Mus_pahari
ENSOMEG00000015656csde110077.662MGP_SPRETEiJ_G0026394Csde110083.444Mus_spretus
ENSOMEG00000015656csde19876.244ENSMPUG00000005753CSDE19978.089Mustela_putorius_furo
ENSOMEG00000015656csde110077.662ENSMLUG00000005681CSDE19477.662Myotis_lucifugus
ENSOMEG00000015656csde19653.556ENSNGAG00000012599-10053.556Nannospalax_galili
ENSOMEG00000015656csde110075.244ENSNGAG00000021929Csde110077.029Nannospalax_galili
ENSOMEG00000015656csde110091.678ENSNBRG00000020808csde110090.897Neolamprologus_brichardi
ENSOMEG00000015656csde110078.052ENSNLEG00000004842CSDE19778.052Nomascus_leucogenys
ENSOMEG00000015656csde19882.524ENSMEUG00000002677CSDE19582.524Notamacropus_eugenii
ENSOMEG00000015656csde19882.524ENSOPRG00000005002CSDE17682.524Ochotona_princeps
ENSOMEG00000015656csde19753.201ENSODEG00000005979-9853.437Octodon_degus
ENSOMEG00000015656csde110075.488ENSODEG00000007383-10077.278Octodon_degus
ENSOMEG00000015656csde110091.799ENSONIG00000009309csde110091.065Oreochromis_niloticus
ENSOMEG00000015656csde110083.051ENSOANG00000003346-8383.051Ornithorhynchus_anatinus
ENSOMEG00000015656csde110077.922ENSOCUG00000016438CSDE19875.659Oryctolagus_cuniculus
ENSOMEG00000015656csde110096.736ENSORLG00000000707csde110096.736Oryzias_latipes
ENSOMEG00000015656csde110096.782ENSORLG00020005148csde110096.782Oryzias_latipes_hni
ENSOMEG00000015656csde110096.782ENSORLG00015019415csde110096.782Oryzias_latipes_hsok
ENSOMEG00000015656csde110078.312ENSOGAG00000012127CSDE19478.312Otolemur_garnettii
ENSOMEG00000015656csde110078.312ENSOARG00000020034CSDE19478.312Ovis_aries
ENSOMEG00000015656csde110078.052ENSPPAG00000025861CSDE110078.052Pan_paniscus
ENSOMEG00000015656csde110078.442ENSPPRG00000006747CSDE19876.110Panthera_pardus
ENSOMEG00000015656csde110078.442ENSPTIG00000015468CSDE110077.903Panthera_tigris_altaica
ENSOMEG00000015656csde110078.052ENSPTRG00000033721CSDE110077.528Pan_troglodytes
ENSOMEG00000015656csde110078.052ENSPANG00000018873CSDE110078.052Papio_anubis
ENSOMEG00000015656csde110084.115ENSPKIG00000009459csde110084.115Paramormyrops_kingsleyae
ENSOMEG00000015656csde19677.966ENSPSIG00000003823CSDE19681.236Pelodiscus_sinensis
ENSOMEG00000015656csde110089.337ENSPMGG00000000772csde110089.337Periophthalmus_magnuspinnatus
ENSOMEG00000015656csde110075.488ENSPEMG00000020357-10077.278Peromyscus_maniculatus_bairdii
ENSOMEG00000015656csde110076.707ENSPCIG00000022587CSDE110078.527Phascolarctos_cinereus
ENSOMEG00000015656csde19788.647ENSPFOG00000012664csde110087.869Poecilia_formosa
ENSOMEG00000015656csde19583.717ENSPLAG00000017680csde19382.796Poecilia_latipinna
ENSOMEG00000015656csde19583.871ENSPMEG00000005094csde19682.796Poecilia_mexicana
ENSOMEG00000015656csde110089.573ENSPREG00000011631csde110088.981Poecilia_reticulata
ENSOMEG00000015656csde110075.610ENSPPYG00000000996CSDE110077.403Pongo_abelii
ENSOMEG00000015656csde110083.495ENSPCAG00000014368CSDE19083.495Procavia_capensis
ENSOMEG00000015656csde18870.260ENSPCOG00000008223-9270.260Propithecus_coquereli
ENSOMEG00000015656csde110078.442ENSPCOG00000017893CSDE110078.442Propithecus_coquereli
ENSOMEG00000015656csde110072.857ENSPVAG00000008225CSDE19572.857Pteropus_vampyrus
ENSOMEG00000015656csde110091.678ENSPNYG00000013745csde110090.897Pundamilia_nyererei
ENSOMEG00000015656csde110085.584ENSPNAG00000001958csde110084.935Pygocentrus_nattereri
ENSOMEG00000015656csde110075.244ENSRNOG00000061058Csde110077.029Rattus_norvegicus
ENSOMEG00000015656csde110074.968ENSRBIG00000038088-10074.968Rhinopithecus_bieti
ENSOMEG00000015656csde110073.506ENSRBIG00000038966-9871.154Rhinopithecus_bieti
ENSOMEG00000015656csde110078.052ENSRROG00000043101CSDE19778.052Rhinopithecus_roxellana
ENSOMEG00000015656csde110077.922ENSSBOG00000035592CSDE19875.630Saimiri_boliviensis_boliviensis
ENSOMEG00000015656csde110079.091ENSSHAG00000009831CSDE110079.091Sarcophilus_harrisii
ENSOMEG00000015656csde110090.476ENSSFOG00015007498csde110083.506Scleropages_formosus
ENSOMEG00000015656csde110091.667ENSSMAG00000007203csde110091.667Scophthalmus_maximus
ENSOMEG00000015656csde110091.667ENSSDUG00000015380csde110091.667Seriola_dumerili
ENSOMEG00000015656csde110091.667ENSSLDG00000008819csde110091.667Seriola_lalandi_dorsalis
ENSOMEG00000015656csde110077.662ENSSARG00000000738CSDE19477.662Sorex_araneus
ENSOMEG00000015656csde110079.584ENSSPUG00000008714CSDE110079.584Sphenodon_punctatus
ENSOMEG00000015656csde110091.667ENSSPAG00000000716csde110091.667Stegastes_partitus
ENSOMEG00000015656csde110078.442ENSSSCG00000006752CSDE110078.442Sus_scrofa
ENSOMEG00000015656csde110075.761ENSTGUG00000000972CSDE110077.556Taeniopygia_guttata
ENSOMEG00000015656csde110085.547ENSTRUG00000007996csde110085.547Takifugu_rubripes
ENSOMEG00000015656csde19380.843ENSTNIG00000010878csde110090.038Tetraodon_nigroviridis
ENSOMEG00000015656csde19280.982ENSTBEG00000011880-6577.500Tupaia_belangeri
ENSOMEG00000015656csde110077.792ENSTTRG00000015583CSDE19477.792Tursiops_truncatus
ENSOMEG00000015656csde19282.143ENSUAMG00000021779-9883.000Ursus_americanus
ENSOMEG00000015656csde18974.199ENSUAMG00000024289-9974.199Ursus_americanus
ENSOMEG00000015656csde19473.697ENSUMAG00000011714-9973.934Ursus_maritimus
ENSOMEG00000015656csde110071.948ENSUMAG00000009720-9771.948Ursus_maritimus
ENSOMEG00000015656csde110080.698ENSVPAG00000000749CSDE17980.698Vicugna_pacos
ENSOMEG00000015656csde19374.788ENSVVUG00000009890CSDE19476.856Vulpes_vulpes
ENSOMEG00000015656csde110075.820ENSXETG00000021448csde110077.612Xenopus_tropicalis
ENSOMEG00000015656csde19492.810ENSXCOG00000000035csde19982.840Xiphophorus_couchianus
ENSOMEG00000015656csde110089.769ENSXMAG00000009080csde110089.160Xiphophorus_maculatus

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