EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000015817 (Gene tree)
Gene ID: 112163113
Gene Symbol: srek1
Alias: -
Full Name: splicing regulatory glutamic acid and lysine rich protein 1
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 14015 bases
Position: chrNVQA01000031.1:4258581-4272595
Accession: 112163113
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000031144	RRM_1	PF00076.22	4.1e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000022183	-	2721	XM_024299284	ENSOMEP00000031144	428 (aa)	XP_024155052	UPI000CF7D31E

Gene Model

Click here to download ENSOMEG00000015817's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000015817's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000015817	srek1	55	34.532	ENSOMEG00000022450	srsf11	63	35.890

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000015817	srek1	56	36.957	ENSG00000116754	SRSF11	51	70.732	Homo_sapiens
ENSOMEG00000015817	srek1	56	70.251	ENSG00000153914	SREK1	97	64.865	Homo_sapiens
ENSOMEG00000015817	srek1	86	84.824	ENSAPOG00000023618	srek1	95	79.620	Acanthochromis_polyacanthus
ENSOMEG00000015817	srek1	56	70.251	ENSAMEG00000011327	SREK1	53	49.819	Ailuropoda_melanoleuca
ENSOMEG00000015817	srek1	88	82.632	ENSAOCG00000024379	srek1	97	77.573	Amphiprion_ocellaris
ENSOMEG00000015817	srek1	87	78.249	ENSATEG00000009450	srek1	96	76.800	Anabas_testudineus
ENSOMEG00000015817	srek1	55	36.264	ENSATEG00000007534	-	64	36.339	Anabas_testudineus
ENSOMEG00000015817	srek1	80	60.459	ENSAPLG00000003948	-	70	70.714	Anas_platyrhynchos
ENSOMEG00000015817	srek1	56	70.251	ENSANAG00000031358	SREK1	91	79.096	Aotus_nancymaae
ENSOMEG00000015817	srek1	57	79.359	ENSACLG00000026754	srek1	96	79.359	Astatotilapia_calliptera
ENSOMEG00000015817	srek1	97	56.879	ENSAMXG00000043877	srek1	98	56.164	Astyanax_mexicanus
ENSOMEG00000015817	srek1	56	70.609	ENSBTAG00000007321	SREK1	85	48.235	Bos_taurus
ENSOMEG00000015817	srek1	56	36.594	ENSCJAG00000017704	SRSF11	50	37.545	Callithrix_jacchus
ENSOMEG00000015817	srek1	64	64.465	ENSCJAG00000015950	SREK1	91	79.096	Callithrix_jacchus
ENSOMEG00000015817	srek1	56	70.251	ENSCAFG00000007560	SREK1	51	49.470	Canis_familiaris
ENSOMEG00000015817	srek1	56	70.609	ENSTSYG00000036957	SREK1	91	78.333	Carlito_syrichta
ENSOMEG00000015817	srek1	56	34.420	ENSTSYG00000033270	-	70	44.444	Carlito_syrichta
ENSOMEG00000015817	srek1	56	68.794	ENSCPOG00000008925	SREK1	52	68.182	Cavia_porcellus
ENSOMEG00000015817	srek1	56	70.251	ENSCCAG00000020591	SREK1	85	48.235	Cebus_capucinus
ENSOMEG00000015817	srek1	63	64.744	ENSCATG00000031482	SREK1	91	79.096	Cercocebus_atys
ENSOMEG00000015817	srek1	56	70.251	ENSCPBG00000026866	SREK1	84	70.251	Chrysemys_picta_bellii
ENSOMEG00000015817	srek1	56	39.249	ENSCING00000022892	-	70	39.510	Ciona_intestinalis
ENSOMEG00000015817	srek1	63	64.744	ENSCANG00000030421	SREK1	91	79.096	Colobus_angolensis_palliatus
ENSOMEG00000015817	srek1	55	33.094	ENSCSEG00000008551	srsf11	56	32.432	Cynoglossus_semilaevis
ENSOMEG00000015817	srek1	55	36.996	ENSCVAG00000006934	-	55	35.531	Cyprinodon_variegatus
ENSOMEG00000015817	srek1	57	71.930	ENSDARG00000009764	srek1	98	51.383	Danio_rerio
ENSOMEG00000015817	srek1	55	32.609	FBgn0024285	Srp54	54	32.323	Drosophila_melanogaster
ENSOMEG00000015817	srek1	57	68.562	ENSELUG00000008230	srek1	77	69.900	Esox_lucius
ENSOMEG00000015817	srek1	80	76.657	ENSFHEG00000020971	srek1	99	76.657	Fundulus_heteroclitus
ENSOMEG00000015817	srek1	55	36.264	ENSGMOG00000002255	-	65	34.699	Gadus_morhua
ENSOMEG00000015817	srek1	98	30.210	ENSGACG00000017855	-	56	31.351	Gasterosteus_aculeatus
ENSOMEG00000015817	srek1	55	34.432	ENSGACG00000009346	srsf11	60	30.376	Gasterosteus_aculeatus
ENSOMEG00000015817	srek1	75	63.158	ENSGAGG00000006087	SREK1	67	70.609	Gopherus_agassizii
ENSOMEG00000015817	srek1	56	70.251	ENSGGOG00000004737	SREK1	91	79.096	Gorilla_gorilla
ENSOMEG00000015817	srek1	56	36.232	ENSHGLG00000008682	SRSF11	69	33.496	Heterocephalus_glaber_female
ENSOMEG00000015817	srek1	57	35.842	ENSHGLG00100018382	SRSF11	74	33.252	Heterocephalus_glaber_male
ENSOMEG00000015817	srek1	54	69.697	ENSHCOG00000017240	SREK1	53	84.393	Hippocampus_comes
ENSOMEG00000015817	srek1	55	36.264	ENSHCOG00000019035	-	73	33.416	Hippocampus_comes
ENSOMEG00000015817	srek1	98	55.644	ENSIPUG00000016851	srek1	55	74.113	Ictalurus_punctatus
ENSOMEG00000015817	srek1	56	68.794	ENSSTOG00000008850	SREK1	85	48.235	Ictidomys_tridecemlineatus
ENSOMEG00000015817	srek1	56	69.504	ENSLAFG00000013853	SREK1	59	49.819	Loxodonta_africana
ENSOMEG00000015817	srek1	63	64.744	ENSMFAG00000039823	SREK1	91	79.096	Macaca_fascicularis
ENSOMEG00000015817	srek1	56	70.251	ENSMMUG00000014586	SREK1	79	48.837	Macaca_mulatta
ENSOMEG00000015817	srek1	63	64.744	ENSMNEG00000030723	SREK1	91	79.096	Macaca_nemestrina
ENSOMEG00000015817	srek1	63	64.744	ENSMLEG00000039078	SREK1	91	79.096	Mandrillus_leucophaeus
ENSOMEG00000015817	srek1	55	37.363	ENSMAMG00000015002	-	53	33.762	Mastacembelus_armatus
ENSOMEG00000015817	srek1	56	69.858	ENSMAUG00000010066	-	57	76.796	Mesocricetus_auratus
ENSOMEG00000015817	srek1	56	70.251	ENSMICG00000034959	SREK1	91	79.096	Microcebus_murinus
ENSOMEG00000015817	srek1	56	69.858	ENSMOCG00000001536	-	57	77.049	Microtus_ochrogaster
ENSOMEG00000015817	srek1	100	73.876	ENSMALG00000017086	srek1	100	70.172	Monopterus_albus
ENSOMEG00000015817	srek1	56	36.727	MGP_CAROLIEiJ_G0025767	Srsf11	80	45.517	Mus_caroli
ENSOMEG00000015817	srek1	56	36.727	ENSMUSG00000055436	Srsf11	85	42.162	Mus_musculus
ENSOMEG00000015817	srek1	56	36.727	MGP_PahariEiJ_G0027217	Srsf11	80	45.517	Mus_pahari
ENSOMEG00000015817	srek1	56	36.727	MGP_SPRETEiJ_G0026719	Srsf11	80	45.517	Mus_spretus
ENSOMEG00000015817	srek1	56	70.251	ENSMPUG00000014736	SREK1	63	57.750	Mustela_putorius_furo
ENSOMEG00000015817	srek1	63	64.744	ENSNLEG00000003827	SREK1	85	48.235	Nomascus_leucogenys
ENSOMEG00000015817	srek1	56	70.968	ENSOPRG00000012111	SREK1	52	70.318	Ochotona_princeps
ENSOMEG00000015817	srek1	87	75.362	ENSONIG00000011080	srek1	99	68.737	Oreochromis_niloticus
ENSOMEG00000015817	srek1	55	35.165	ENSORLG00000007753	srsf11	56	31.063	Oryzias_latipes
ENSOMEG00000015817	srek1	74	34.746	ENSORLG00020016204	srsf11	63	34.973	Oryzias_latipes_hni
ENSOMEG00000015817	srek1	68	38.369	ENSORLG00020009393	-	68	34.302	Oryzias_latipes_hni
ENSOMEG00000015817	srek1	55	35.165	ENSORLG00015011944	srsf11	63	34.973	Oryzias_latipes_hsok
ENSOMEG00000015817	srek1	68	38.369	ENSORLG00015009374	-	68	34.302	Oryzias_latipes_hsok
ENSOMEG00000015817	srek1	55	70.144	ENSPPAG00000031605	SREK1	91	79.096	Pan_paniscus
ENSOMEG00000015817	srek1	56	69.892	ENSPPRG00000024617	SREK1	85	47.059	Panthera_pardus
ENSOMEG00000015817	srek1	56	69.892	ENSPTIG00000006608	SREK1	85	47.059	Panthera_tigris_altaica
ENSOMEG00000015817	srek1	56	70.251	ENSPTRG00000016936	SREK1	91	79.096	Pan_troglodytes
ENSOMEG00000015817	srek1	63	64.744	ENSPANG00000008953	SREK1	91	79.096	Papio_anubis
ENSOMEG00000015817	srek1	57	74.296	ENSPKIG00000025563	srek1	54	75.000	Paramormyrops_kingsleyae
ENSOMEG00000015817	srek1	56	37.091	ENSPSIG00000005152	SRSF11	73	33.333	Pelodiscus_sinensis
ENSOMEG00000015817	srek1	56	69.858	ENSPEMG00000024051	-	59	77.049	Peromyscus_maniculatus_bairdii
ENSOMEG00000015817	srek1	56	36.786	ENSPMAG00000004397	srsf11	54	34.054	Petromyzon_marinus
ENSOMEG00000015817	srek1	56	36.727	ENSPCIG00000002083	SRSF11	68	33.249	Phascolarctos_cinereus
ENSOMEG00000015817	srek1	79	67.801	ENSPMEG00000006831	srek1	64	79.104	Poecilia_mexicana
ENSOMEG00000015817	srek1	56	70.251	ENSPCOG00000026230	SREK1	91	79.096	Propithecus_coquereli
ENSOMEG00000015817	srek1	72	75.633	ENSPNYG00000007160	srek1	98	75.484	Pundamilia_nyererei
ENSOMEG00000015817	srek1	97	58.546	ENSPNAG00000004328	srek1	57	73.944	Pygocentrus_nattereri
ENSOMEG00000015817	srek1	56	70.251	ENSRBIG00000033818	SREK1	91	76.923	Rhinopithecus_bieti
ENSOMEG00000015817	srek1	63	64.744	ENSRROG00000017210	SREK1	91	79.096	Rhinopithecus_roxellana
ENSOMEG00000015817	srek1	56	70.251	ENSSBOG00000031230	SREK1	91	79.096	Saimiri_boliviensis_boliviensis
ENSOMEG00000015817	srek1	56	35.273	ENSSHAG00000012111	SRSF11	73	33.250	Sarcophilus_harrisii
ENSOMEG00000015817	srek1	98	52.281	ENSSFOG00015004995	srek1	74	74.296	Scleropages_formosus
ENSOMEG00000015817	srek1	100	70.464	ENSSMAG00000011808	srek1	100	65.190	Scophthalmus_maximus
ENSOMEG00000015817	srek1	55	37.226	ENSSLDG00000012105	-	50	36.496	Seriola_lalandi_dorsalis
ENSOMEG00000015817	srek1	55	69.534	ENSSPUG00000016553	SREK1	89	69.534	Sphenodon_punctatus
ENSOMEG00000015817	srek1	87	67.980	ENSTNIG00000013463	srek1	70	78.214	Tetraodon_nigroviridis
ENSOMEG00000015817	srek1	56	62.500	ENSXETG00000021460	srek1	61	63.816	Xenopus_tropicalis