EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000015959 (Gene tree)
Gene ID: 112159244
Gene Symbol: -
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein A1-like
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 6417 bases
Position: chrNVQA01000024.1:14513288-14519704
Accession: 112159244
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000014454	RRM_1	PF00076.22	4.2e-36	1	2
ENSOMEP00000014454	RRM_1	PF00076.22	4.2e-36	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000033560	-	5193	-	ENSOMEP00000014454	329 (aa)	XP_024148963	UPI000CF7F5C8

Gene Model

Click here to download ENSOMEG00000015959's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000015959's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000015959	-	50	50.704	ENSOMEG00000021469	cirbpa	53	48.684
ENSOMEG00000015959	-	80	48.205	ENSOMEG00000002509	-	83	51.429
ENSOMEG00000015959	-	56	41.143	ENSOMEG00000017536	MSI1	54	41.520
ENSOMEG00000015959	-	56	42.373	ENSOMEG00000002272	-	54	42.105
ENSOMEG00000015959	-	80	45.238	ENSOMEG00000021030	-	66	51.136
ENSOMEG00000015959	-	55	40.556	ENSOMEG00000018558	hnrnpd	57	40.437
ENSOMEG00000015959	-	81	44.444	ENSOMEG00000012368	-	68	50.273
ENSOMEG00000015959	-	53	39.306	ENSOMEG00000023772	hnrnpabb	56	37.705
ENSOMEG00000015959	-	70	45.238	ENSOMEG00000009566	-	87	45.238
ENSOMEG00000015959	-	78	37.692	ENSOMEG00000006327	-	70	41.714
ENSOMEG00000015959	-	77	44.615	ENSOMEG00000013637	-	73	54.762
ENSOMEG00000015959	-	57	52.000	ENSOMEG00000002000	-	60	52.000
ENSOMEG00000015959	-	59	81.538	ENSOMEG00000004838	hnrnpa3	89	67.224
ENSOMEG00000015959	-	52	39.412	ENSOMEG00000005936	hnrnpaba	53	38.333
ENSOMEG00000015959	-	84	44.231	ENSOMEG00000023475	-	68	49.727
ENSOMEG00000015959	-	87	42.529	ENSOMEG00000006903	-	63	48.087
ENSOMEG00000015959	-	61	39.691	ENSOMEG00000000146	msi2a	57	41.279
ENSOMEG00000015959	-	54	60.976	ENSOMEG00000011670	-	97	61.350
ENSOMEG00000015959	-	53	53.933	ENSOMEG00000002084	-	72	53.933

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000015959	-	68	95.982	ENSAPOG00000019369	-	100	85.970	Acanthochromis_polyacanthus
ENSOMEG00000015959	-	54	56.180	ENSACIG00000021815	-	87	56.180	Amphilophus_citrinellus
ENSOMEG00000015959	-	68	95.982	ENSAOCG00000005289	-	100	86.826	Amphiprion_ocellaris
ENSOMEG00000015959	-	68	95.982	ENSAPEG00000004179	-	100	86.826	Amphiprion_percula
ENSOMEG00000015959	-	68	59.748	ENSATEG00000003423	-	75	59.748	Anabas_testudineus
ENSOMEG00000015959	-	68	95.536	ENSATEG00000022918	hnrnpa1a	100	84.071	Anabas_testudineus
ENSOMEG00000015959	-	94	93.438	ENSACLG00000006940	-	100	89.349	Astatotilapia_calliptera
ENSOMEG00000015959	-	56	85.326	ENSAMXG00000006296	hnrnpa1a	89	58.017	Astyanax_mexicanus
ENSOMEG00000015959	-	55	63.277	ENSAMXG00000037730	-	86	54.082	Astyanax_mexicanus
ENSOMEG00000015959	-	100	78.313	ENSCSEG00000007589	hnrnpa1a	99	78.963	Cynoglossus_semilaevis
ENSOMEG00000015959	-	70	55.814	ENSCSEG00000014051	-	72	54.857	Cynoglossus_semilaevis
ENSOMEG00000015959	-	69	93.805	ENSCVAG00000012637	hnrnpa1a	100	82.698	Cyprinodon_variegatus
ENSOMEG00000015959	-	58	81.250	ENSDARG00000011020	hnrnpa1a	86	62.090	Danio_rerio
ENSOMEG00000015959	-	60	56.000	ENSDORG00000026425	-	79	48.727	Dipodomys_ordii
ENSOMEG00000015959	-	59	89.175	ENSELUG00000007372	-	91	65.854	Esox_lucius
ENSOMEG00000015959	-	56	61.667	ENSGMOG00000020353	-	94	61.667	Gadus_morhua
ENSOMEG00000015959	-	90	84.262	ENSGAFG00000007751	-	100	83.041	Gambusia_affinis
ENSOMEG00000015959	-	64	92.697	ENSGACG00000009435	-	88	81.716	Gasterosteus_aculeatus
ENSOMEG00000015959	-	68	93.805	ENSHBUG00000005647	hnrnpa1a	100	89.318	Haplochromis_burtoni
ENSOMEG00000015959	-	78	86.667	ENSIPUG00000002023	hnrnpa1a	76	86.286	Ictalurus_punctatus
ENSOMEG00000015959	-	56	62.921	ENSIPUG00000001991	-	76	62.921	Ictalurus_punctatus
ENSOMEG00000015959	-	59	84.021	ENSIPUG00000022440	-	72	85.030	Ictalurus_punctatus
ENSOMEG00000015959	-	55	66.851	ENSJJAG00000009178	-	90	52.922	Jaculus_jaculus
ENSOMEG00000015959	-	100	85.163	ENSKMAG00000020859	-	100	86.647	Kryptolebias_marmoratus
ENSOMEG00000015959	-	68	91.593	ENSLBEG00000010010	hnrnpa1a	91	82.540	Labrus_bergylta
ENSOMEG00000015959	-	57	72.432	ENSMFAG00000028351	-	91	59.211	Macaca_fascicularis
ENSOMEG00000015959	-	68	96.429	ENSMAMG00000007606	-	100	83.478	Mastacembelus_armatus
ENSOMEG00000015959	-	68	93.805	ENSMZEG00005027173	hnrnpa1a	100	89.614	Maylandia_zebra
ENSOMEG00000015959	-	83	76.923	ENSMMOG00000008251	hnrnpa1a	91	87.273	Mola_mola
ENSOMEG00000015959	-	54	56.497	ENSMALG00000008886	-	86	56.497	Monopterus_albus
ENSOMEG00000015959	-	68	96.429	ENSMALG00000014091	hnrnpa1a	100	84.104	Monopterus_albus
ENSOMEG00000015959	-	58	58.511	ENSNBRG00000014469	-	82	60.227	Neolamprologus_brichardi
ENSOMEG00000015959	-	68	93.805	ENSNBRG00000018441	-	100	89.286	Neolamprologus_brichardi
ENSOMEG00000015959	-	100	98.485	ENSORLG00000008001	-	100	98.485	Oryzias_latipes
ENSOMEG00000015959	-	70	48.507	ENSORLG00000029240	-	94	52.874	Oryzias_latipes
ENSOMEG00000015959	-	54	51.724	ENSORLG00020006043	-	59	51.724	Oryzias_latipes_hni
ENSOMEG00000015959	-	100	98.485	ENSORLG00020006582	hnrnpa1a	100	98.485	Oryzias_latipes_hni
ENSOMEG00000015959	-	64	51.977	ENSORLG00020022498	-	80	52.874	Oryzias_latipes_hni
ENSOMEG00000015959	-	100	98.788	ENSORLG00015022294	-	100	98.788	Oryzias_latipes_hsok
ENSOMEG00000015959	-	57	94.681	ENSPMGG00000011804	hnrnpa1a	92	73.139	Periophthalmus_magnuspinnatus
ENSOMEG00000015959	-	57	56.831	ENSPMGG00000016392	-	93	58.101	Periophthalmus_magnuspinnatus
ENSOMEG00000015959	-	69	96.460	ENSPFOG00000001825	-	100	83.284	Poecilia_formosa
ENSOMEG00000015959	-	69	96.460	ENSPMEG00000002425	-	100	83.284	Poecilia_mexicana
ENSOMEG00000015959	-	58	58.511	ENSPNYG00000020729	-	90	60.227	Pundamilia_nyererei
ENSOMEG00000015959	-	76	65.462	ENSPNAG00000007752	hnrnpa1a	72	85.635	Pygocentrus_nattereri
ENSOMEG00000015959	-	57	86.096	ENSPNAG00000021630	-	57	85.484	Pygocentrus_nattereri
ENSOMEG00000015959	-	64	92.453	ENSSMAG00000004641	hnrnpa1a	91	81.620	Scophthalmus_maximus
ENSOMEG00000015959	-	53	55.682	ENSSMAG00000010246	-	79	55.367	Scophthalmus_maximus
ENSOMEG00000015959	-	65	59.639	ENSSMAG00000010279	-	93	59.639	Scophthalmus_maximus
ENSOMEG00000015959	-	54	60.819	ENSSDUG00000002431	-	82	60.116	Seriola_dumerili
ENSOMEG00000015959	-	90	96.891	ENSSDUG00000013908	hnrnpa1a	91	100.000	Seriola_dumerili
ENSOMEG00000015959	-	89	97.826	ENSSLDG00000003718	hnrnpa1a	86	91.981	Seriola_lalandi_dorsalis
ENSOMEG00000015959	-	91	85.050	ENSSPAG00000018518	-	99	87.651	Stegastes_partitus
ENSOMEG00000015959	-	68	89.333	ENSTRUG00000020491	-	92	79.000	Takifugu_rubripes
ENSOMEG00000015959	-	57	61.538	ENSTNIG00000007398	-	69	61.453	Tetraodon_nigroviridis
ENSOMEG00000015959	-	83	79.412	ENSXCOG00000009001	-	92	93.981	Xiphophorus_couchianus
ENSOMEG00000015959	-	69	96.903	ENSXMAG00000008076	-	100	82.849	Xiphophorus_maculatus