EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000016043 (Gene tree)
Gene ID: 112160971
Gene Symbol: sall1a
Alias: -
Full Name: spalt like transcription factor 1
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 11540 bases
Position: chrNVQA01000027.1:8067467-8079006
Accession: 112160971
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000031282	zf-C2H2	PF00096.26	5.6e-37	1	7
ENSOMEP00000031282	zf-C2H2	PF00096.26	5.6e-37	2	7
ENSOMEP00000031282	zf-C2H2	PF00096.26	5.6e-37	3	7
ENSOMEP00000031282	zf-C2H2	PF00096.26	5.6e-37	4	7
ENSOMEP00000031282	zf-C2H2	PF00096.26	5.6e-37	5	7
ENSOMEP00000031282	zf-C2H2	PF00096.26	5.6e-37	6	7
ENSOMEP00000031282	zf-C2H2	PF00096.26	5.6e-37	7	7
ENSOMEP00000031299	zf-C2H2	PF00096.26	2.4e-34	1	7
ENSOMEP00000031299	zf-C2H2	PF00096.26	2.4e-34	2	7
ENSOMEP00000031299	zf-C2H2	PF00096.26	2.4e-34	3	7
ENSOMEP00000031299	zf-C2H2	PF00096.26	2.4e-34	4	7
ENSOMEP00000031299	zf-C2H2	PF00096.26	2.4e-34	5	7
ENSOMEP00000031299	zf-C2H2	PF00096.26	2.4e-34	6	7
ENSOMEP00000031299	zf-C2H2	PF00096.26	2.4e-34	7	7
ENSOMEP00000031282	zf-met	PF12874.7	5.6e-24	1	5
ENSOMEP00000031282	zf-met	PF12874.7	5.6e-24	2	5
ENSOMEP00000031282	zf-met	PF12874.7	5.6e-24	3	5
ENSOMEP00000031282	zf-met	PF12874.7	5.6e-24	4	5
ENSOMEP00000031282	zf-met	PF12874.7	5.6e-24	5	5
ENSOMEP00000031299	zf-met	PF12874.7	9.9e-24	1	5
ENSOMEP00000031299	zf-met	PF12874.7	9.9e-24	2	5
ENSOMEP00000031299	zf-met	PF12874.7	9.9e-24	3	5
ENSOMEP00000031299	zf-met	PF12874.7	9.9e-24	4	5
ENSOMEP00000031299	zf-met	PF12874.7	9.9e-24	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000022470	-	5960	XM_024295902	ENSOMEP00000031299	1307 (aa)	XP_024151670	UPI000CF81D0C
ENSOMET00000022459	-	5665	XM_024295903	ENSOMEP00000031282	1211 (aa)	XP_024151671	UPI000CF7F738

Gene Model

Click here to download ENSOMEG00000016043's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000016043's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000016043	sall1a	57	44.898	ENSOMEG00000002639	-	95	44.898
ENSOMEG00000016043	sall1a	90	65.385	ENSOMEG00000017344	sall4	94	65.385

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000016043	sall1a	99	67.662	ENSG00000103449	SALL1	100	67.588	Homo_sapiens
ENSOMEG00000016043	sall1a	100	91.825	ENSAPOG00000022764	sall1a	100	91.813	Acanthochromis_polyacanthus
ENSOMEG00000016043	sall1a	99	66.640	ENSAMEG00000006817	SALL1	100	66.617	Ailuropoda_melanoleuca
ENSOMEG00000016043	sall1a	100	90.130	ENSACIG00000004231	sall1a	100	90.130	Amphilophus_citrinellus
ENSOMEG00000016043	sall1a	100	91.990	ENSAOCG00000002800	sall1a	100	91.966	Amphiprion_ocellaris
ENSOMEG00000016043	sall1a	100	91.742	ENSAPEG00000010179	sall1a	100	91.660	Amphiprion_percula
ENSOMEG00000016043	sall1a	99	90.744	ENSATEG00000003006	sall1a	100	90.669	Anabas_testudineus
ENSOMEG00000016043	sall1a	100	68.999	ENSAPLG00000003356	SALL1	100	68.971	Anas_platyrhynchos
ENSOMEG00000016043	sall1a	99	67.854	ENSACAG00000014399	SALL1	97	67.197	Anolis_carolinensis
ENSOMEG00000016043	sall1a	99	67.764	ENSANAG00000027238	SALL1	100	68.036	Aotus_nancymaae
ENSOMEG00000016043	sall1a	100	90.669	ENSACLG00000017148	sall1a	100	90.669	Astatotilapia_calliptera
ENSOMEG00000016043	sall1a	99	51.803	ENSAMXG00000017702	sall1b	99	51.732	Astyanax_mexicanus
ENSOMEG00000016043	sall1a	100	79.967	ENSAMXG00000018599	sall1a	100	80.289	Astyanax_mexicanus
ENSOMEG00000016043	sall1a	100	66.866	ENSBTAG00000008544	SALL1	100	67.140	Bos_taurus
ENSOMEG00000016043	sall1a	99	67.988	ENSCJAG00000001740	SALL1	100	68.185	Callithrix_jacchus
ENSOMEG00000016043	sall1a	99	66.990	ENSCAFG00000009755	SALL1	100	66.940	Canis_familiaris
ENSOMEG00000016043	sall1a	99	66.990	ENSCAFG00020002842	SALL1	100	66.940	Canis_lupus_dingo
ENSOMEG00000016043	sall1a	100	66.534	ENSCHIG00000026074	SALL1	100	66.766	Capra_hircus
ENSOMEG00000016043	sall1a	99	67.713	ENSTSYG00000029464	SALL1	100	67.638	Carlito_syrichta
ENSOMEG00000016043	sall1a	99	67.393	ENSCPOG00000006564	SALL1	99	67.458	Cavia_porcellus
ENSOMEG00000016043	sall1a	99	65.969	ENSCCAG00000001639	SALL1	100	66.169	Cebus_capucinus
ENSOMEG00000016043	sall1a	99	67.838	ENSCATG00000004982	SALL1	100	67.961	Cercocebus_atys
ENSOMEG00000016043	sall1a	99	66.965	ENSCLAG00000006380	SALL1	100	66.889	Chinchilla_lanigera
ENSOMEG00000016043	sall1a	99	67.240	ENSCSAG00000005319	SALL1	100	67.289	Chlorocebus_sabaeus
ENSOMEG00000016043	sall1a	68	66.406	ENSCHOG00000000800	-	69	66.275	Choloepus_hoffmanni
ENSOMEG00000016043	sall1a	100	68.670	ENSCPBG00000015924	SALL1	100	68.932	Chrysemys_picta_bellii
ENSOMEG00000016043	sall1a	99	68.065	ENSCANG00000036664	SALL1	100	67.988	Colobus_angolensis_palliatus
ENSOMEG00000016043	sall1a	99	66.343	ENSCGRG00001023314	-	100	66.642	Cricetulus_griseus_chok1gshd
ENSOMEG00000016043	sall1a	99	66.290	ENSCGRG00000009496	Sall1	99	66.897	Cricetulus_griseus_crigri
ENSOMEG00000016043	sall1a	99	88.633	ENSCSEG00000009349	sall1a	99	88.168	Cynoglossus_semilaevis
ENSOMEG00000016043	sall1a	90	89.080	ENSCVAG00000020513	sall1a	99	89.080	Cyprinodon_variegatus
ENSOMEG00000016043	sall1a	99	47.508	ENSDARG00000075891	sall1b	99	46.453	Danio_rerio
ENSOMEG00000016043	sall1a	100	78.378	ENSDARG00000074319	sall1a	100	77.969	Danio_rerio
ENSOMEG00000016043	sall1a	99	68.116	ENSDNOG00000016413	SALL1	100	67.713	Dasypus_novemcinctus
ENSOMEG00000016043	sall1a	99	66.990	ENSETEG00000015150	SALL1	99	67.231	Echinops_telfairi
ENSOMEG00000016043	sall1a	68	42.608	ENSEBUG00000008798	SALL1	67	41.131	Eptatretus_burgeri
ENSOMEG00000016043	sall1a	90	65.385	ENSEBUG00000011732	SALL1	97	65.385	Eptatretus_burgeri
ENSOMEG00000016043	sall1a	99	67.447	ENSEASG00005014602	SALL1	100	67.464	Equus_asinus_asinus
ENSOMEG00000016043	sall1a	91	65.347	ENSECAG00000011334	SALL1	99	65.461	Equus_caballus
ENSOMEG00000016043	sall1a	99	67.661	ENSEEUG00000002014	SALL1	100	67.634	Erinaceus_europaeus
ENSOMEG00000016043	sall1a	100	76.995	ENSELUG00000006159	sall1a	100	76.995	Esox_lucius
ENSOMEG00000016043	sall1a	100	54.068	ENSELUG00000017774	-	100	54.762	Esox_lucius
ENSOMEG00000016043	sall1a	99	66.667	ENSFCAG00000024654	SALL1	100	66.613	Felis_catus
ENSOMEG00000016043	sall1a	100	68.971	ENSFALG00000000074	SALL1	100	68.722	Ficedula_albicollis
ENSOMEG00000016043	sall1a	79	65.854	ENSFHEG00000008424	-	100	63.265	Fundulus_heteroclitus
ENSOMEG00000016043	sall1a	100	90.339	ENSFHEG00000012579	sall1a	100	89.977	Fundulus_heteroclitus
ENSOMEG00000016043	sall1a	97	41.216	ENSGMOG00000013383	-	99	41.291	Gadus_morhua
ENSOMEG00000016043	sall1a	100	82.317	ENSGMOG00000006103	sall1a	100	82.317	Gadus_morhua
ENSOMEG00000016043	sall1a	100	69.444	ENSGALG00000039238	SALL1	100	69.346	Gallus_gallus
ENSOMEG00000016043	sall1a	100	90.437	ENSGAFG00000009964	sall1a	100	90.145	Gambusia_affinis
ENSOMEG00000016043	sall1a	99	88.678	ENSGACG00000016702	sall1a	99	88.515	Gasterosteus_aculeatus
ENSOMEG00000016043	sall1a	100	68.666	ENSGAGG00000013979	SALL1	100	68.932	Gopherus_agassizii
ENSOMEG00000016043	sall1a	99	67.886	ENSGGOG00000000663	SALL1	100	67.812	Gorilla_gorilla
ENSOMEG00000016043	sall1a	100	90.586	ENSHBUG00000022005	sall1a	100	90.586	Haplochromis_burtoni
ENSOMEG00000016043	sall1a	99	67.363	ENSHGLG00000004288	-	100	67.461	Heterocephalus_glaber_female
ENSOMEG00000016043	sall1a	99	67.363	ENSHGLG00100017496	SALL1	100	67.461	Heterocephalus_glaber_male
ENSOMEG00000016043	sall1a	100	83.931	ENSHCOG00000000974	sall1a	100	83.661	Hippocampus_comes
ENSOMEG00000016043	sall1a	100	79.310	ENSIPUG00000016265	SALL1	100	78.919	Ictalurus_punctatus
ENSOMEG00000016043	sall1a	99	50.566	ENSIPUG00000022928	sall1b	99	50.076	Ictalurus_punctatus
ENSOMEG00000016043	sall1a	99	67.608	ENSSTOG00000020885	SALL1	100	67.509	Ictidomys_tridecemlineatus
ENSOMEG00000016043	sall1a	100	90.917	ENSKMAG00000016681	sall1a	100	90.666	Kryptolebias_marmoratus
ENSOMEG00000016043	sall1a	99	88.119	ENSLBEG00000012207	sall1a	95	87.784	Labrus_bergylta
ENSOMEG00000016043	sall1a	100	68.548	ENSLACG00000003556	SALL1	100	68.698	Latimeria_chalumnae
ENSOMEG00000016043	sall1a	60	40.755	ENSLACG00000014018	-	93	39.450	Latimeria_chalumnae
ENSOMEG00000016043	sall1a	100	76.946	ENSLOCG00000007283	sall1b	100	76.946	Lepisosteus_oculatus
ENSOMEG00000016043	sall1a	99	67.797	ENSLAFG00000015251	SALL1	100	67.273	Loxodonta_africana
ENSOMEG00000016043	sall1a	99	67.937	ENSMFAG00000003298	SALL1	100	67.961	Macaca_fascicularis
ENSOMEG00000016043	sall1a	99	67.849	ENSMMUG00000017200	SALL1	100	67.874	Macaca_mulatta
ENSOMEG00000016043	sall1a	99	67.874	ENSMNEG00000034770	SALL1	100	67.794	Macaca_nemestrina
ENSOMEG00000016043	sall1a	99	68.063	ENSMLEG00000036406	SALL1	100	67.961	Mandrillus_leucophaeus
ENSOMEG00000016043	sall1a	99	91.247	ENSMAMG00000004164	sall1a	99	91.247	Mastacembelus_armatus
ENSOMEG00000016043	sall1a	100	90.669	ENSMZEG00005006479	sall1a	100	90.669	Maylandia_zebra
ENSOMEG00000016043	sall1a	100	69.312	ENSMGAG00000004704	SALL1	100	69.066	Meleagris_gallopavo
ENSOMEG00000016043	sall1a	99	66.766	ENSMAUG00000019093	Sall1	100	66.642	Mesocricetus_auratus
ENSOMEG00000016043	sall1a	100	67.044	ENSMICG00000036486	SALL1	100	67.091	Microcebus_murinus
ENSOMEG00000016043	sall1a	99	89.256	ENSMMOG00000016400	sall1a	99	89.127	Mola_mola
ENSOMEG00000016043	sall1a	99	67.851	ENSMODG00000013114	SALL1	99	68.315	Monodelphis_domestica
ENSOMEG00000016043	sall1a	99	90.496	ENSMALG00000013400	sall1a	99	90.199	Monopterus_albus
ENSOMEG00000016043	sall1a	99	66.691	MGP_CAROLIEiJ_G0031362	Sall1	100	66.617	Mus_caroli
ENSOMEG00000016043	sall1a	99	66.420	ENSMUSG00000031665	Sall1	100	66.469	Mus_musculus
ENSOMEG00000016043	sall1a	99	66.469	MGP_PahariEiJ_G0022961	Sall1	100	66.296	Mus_pahari
ENSOMEG00000016043	sall1a	99	66.420	MGP_SPRETEiJ_G0032480	Sall1	100	66.469	Mus_spretus
ENSOMEG00000016043	sall1a	100	66.210	ENSMPUG00000003265	SALL1	96	66.616	Mustela_putorius_furo
ENSOMEG00000016043	sall1a	100	65.169	ENSMLUG00000015541	SALL1	100	65.106	Myotis_lucifugus
ENSOMEG00000016043	sall1a	100	90.834	ENSNBRG00000009307	sall1a	100	90.834	Neolamprologus_brichardi
ENSOMEG00000016043	sall1a	94	81.006	ENSNLEG00000001008	SALL1	99	80.556	Nomascus_leucogenys
ENSOMEG00000016043	sall1a	99	67.994	ENSMEUG00000012206	SALL1	99	68.421	Notamacropus_eugenii
ENSOMEG00000016043	sall1a	88	72.647	ENSOPRG00000005645	SALL1	71	72.165	Ochotona_princeps
ENSOMEG00000016043	sall1a	99	67.258	ENSODEG00000003685	SALL1	100	67.438	Octodon_degus
ENSOMEG00000016043	sall1a	100	90.999	ENSONIG00000002831	sall1a	100	90.895	Oreochromis_niloticus
ENSOMEG00000016043	sall1a	95	64.421	ENSOANG00000013399	SALL1	96	77.143	Ornithorhynchus_anatinus
ENSOMEG00000016043	sall1a	100	97.192	ENSORLG00000013827	sall1a	100	97.720	Oryzias_latipes
ENSOMEG00000016043	sall1a	100	97.246	ENSORLG00020020570	sall1a	100	97.246	Oryzias_latipes_hni
ENSOMEG00000016043	sall1a	100	97.110	ENSORLG00015018830	sall1a	100	97.635	Oryzias_latipes_hsok
ENSOMEG00000016043	sall1a	99	67.788	ENSOGAG00000027316	SALL1	100	67.638	Otolemur_garnettii
ENSOMEG00000016043	sall1a	100	63.004	ENSOARG00000017583	SALL1	100	63.351	Ovis_aries
ENSOMEG00000016043	sall1a	99	67.633	ENSPPAG00000035657	SALL1	100	67.631	Pan_paniscus
ENSOMEG00000016043	sall1a	99	50.122	ENSPPAG00000035136	-	99	50.339	Pan_paniscus
ENSOMEG00000016043	sall1a	100	66.694	ENSPPRG00000023283	SALL1	100	66.694	Panthera_pardus
ENSOMEG00000016043	sall1a	89	71.053	ENSPTIG00000013539	-	94	71.078	Panthera_tigris_altaica
ENSOMEG00000016043	sall1a	98	50.269	ENSPTRG00000045256	-	99	50.767	Pan_troglodytes
ENSOMEG00000016043	sall1a	99	67.689	ENSPTRG00000008108	SALL1	100	67.711	Pan_troglodytes
ENSOMEG00000016043	sall1a	99	67.988	ENSPANG00000024176	SALL1	100	67.886	Papio_anubis
ENSOMEG00000016043	sall1a	100	70.106	ENSPKIG00000005383	-	100	70.121	Paramormyrops_kingsleyae
ENSOMEG00000016043	sall1a	100	71.755	ENSPKIG00000022251	sall1a	100	70.987	Paramormyrops_kingsleyae
ENSOMEG00000016043	sall1a	100	69.150	ENSPSIG00000008582	SALL1	100	69.023	Pelodiscus_sinensis
ENSOMEG00000016043	sall1a	99	85.396	ENSPMGG00000021788	sall1a	99	83.761	Periophthalmus_magnuspinnatus
ENSOMEG00000016043	sall1a	99	68.123	ENSPCIG00000017840	SALL1	99	68.421	Phascolarctos_cinereus
ENSOMEG00000016043	sall1a	100	90.684	ENSPFOG00000015799	sall1a	96	90.210	Poecilia_formosa
ENSOMEG00000016043	sall1a	100	90.684	ENSPLAG00000022539	sall1a	100	90.451	Poecilia_latipinna
ENSOMEG00000016043	sall1a	100	90.932	ENSPMEG00000020894	sall1a	100	90.680	Poecilia_mexicana
ENSOMEG00000016043	sall1a	100	90.190	ENSPREG00000006802	sall1a	100	89.916	Poecilia_reticulata
ENSOMEG00000016043	sall1a	90	66.806	ENSPPYG00000007345	SALL1	96	66.918	Pongo_abelii
ENSOMEG00000016043	sall1a	84	69.136	ENSPCAG00000008162	SALL1	93	69.163	Procavia_capensis
ENSOMEG00000016043	sall1a	99	67.179	ENSPCOG00000028192	SALL1	100	67.440	Propithecus_coquereli
ENSOMEG00000016043	sall1a	72	69.400	ENSPVAG00000015374	SALL1	100	69.480	Pteropus_vampyrus
ENSOMEG00000016043	sall1a	100	90.751	ENSPNYG00000010865	sall1a	100	90.751	Pundamilia_nyererei
ENSOMEG00000016043	sall1a	99	53.318	ENSPNAG00000007442	sall1b	99	53.353	Pygocentrus_nattereri
ENSOMEG00000016043	sall1a	71	65.306	ENSPNAG00000028248	-	67	65.306	Pygocentrus_nattereri
ENSOMEG00000016043	sall1a	100	77.490	ENSPNAG00000023644	sall1a	100	77.871	Pygocentrus_nattereri
ENSOMEG00000016043	sall1a	100	66.468	ENSRNOG00000013907	Sall1	100	66.517	Rattus_norvegicus
ENSOMEG00000016043	sall1a	99	67.742	ENSRBIG00000015707	SALL1	100	67.794	Rhinopithecus_bieti
ENSOMEG00000016043	sall1a	99	67.742	ENSRROG00000035777	SALL1	100	67.661	Rhinopithecus_roxellana
ENSOMEG00000016043	sall1a	99	67.862	ENSSBOG00000032186	SALL1	100	68.036	Saimiri_boliviensis_boliviensis
ENSOMEG00000016043	sall1a	99	68.314	ENSSHAG00000009477	SALL1	99	68.195	Sarcophilus_harrisii
ENSOMEG00000016043	sall1a	99	72.973	ENSSFOG00015020020	sall1a	100	71.882	Scleropages_formosus
ENSOMEG00000016043	sall1a	100	71.184	ENSSFOG00015001590	sall1a	99	70.779	Scleropages_formosus
ENSOMEG00000016043	sall1a	99	90.331	ENSSMAG00000009160	sall1a	99	90.276	Scophthalmus_maximus
ENSOMEG00000016043	sall1a	99	92.645	ENSSDUG00000006507	sall1a	99	92.645	Seriola_dumerili
ENSOMEG00000016043	sall1a	82	59.184	ENSSDUG00000000748	sall1b	99	59.184	Seriola_dumerili
ENSOMEG00000016043	sall1a	99	92.645	ENSSLDG00000017721	sall1a	99	92.343	Seriola_lalandi_dorsalis
ENSOMEG00000016043	sall1a	99	66.828	ENSSARG00000000661	SALL1	99	67.203	Sorex_araneus
ENSOMEG00000016043	sall1a	100	68.182	ENSSPUG00000000156	SALL1	100	68.393	Sphenodon_punctatus
ENSOMEG00000016043	sall1a	100	92.657	ENSSPAG00000021615	sall1a	100	92.508	Stegastes_partitus
ENSOMEG00000016043	sall1a	99	66.828	ENSSSCG00000002836	SALL1	100	66.766	Sus_scrofa
ENSOMEG00000016043	sall1a	100	68.820	ENSTGUG00000007514	SALL1	100	68.670	Taeniopygia_guttata
ENSOMEG00000016043	sall1a	91	86.192	ENSTRUG00000008950	sall1a	100	86.192	Takifugu_rubripes
ENSOMEG00000016043	sall1a	92	84.583	ENSTNIG00000004257	sall1a	100	84.583	Tetraodon_nigroviridis
ENSOMEG00000016043	sall1a	67	76.027	ENSTBEG00000002119	-	53	76.027	Tupaia_belangeri
ENSOMEG00000016043	sall1a	90	65.520	ENSUAMG00000023379	-	92	66.052	Ursus_americanus
ENSOMEG00000016043	sall1a	90	65.221	ENSVVUG00000019383	-	99	65.612	Vulpes_vulpes
ENSOMEG00000016043	sall1a	100	66.909	ENSXETG00000018417	sall1	100	65.373	Xenopus_tropicalis
ENSOMEG00000016043	sall1a	100	90.684	ENSXMAG00000016273	sall1a	100	90.684	Xiphophorus_maculatus