EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000016160 (Gene tree)
Gene ID: 112144446
Gene Symbol: imp3
Alias: -
Full Name: IMP3%2C U3 small nucleolar ribonucleoprotein
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 3898 bases
Position: chrNVQA01000008.1:4887470-4891367
Accession: 112144446
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000014632	S4	PF01479.25	2.7e-09	1	1
ENSOMEP00000014624	S4	PF01479.25	2.9e-09	1	1
ENSOMEP00000014632	Ribosomal_S4	PF00163.19	9.7e-08	1	1
ENSOMEP00000014624	Ribosomal_S4	PF00163.19	1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000022572	-	2533	-	ENSOMEP00000014624	183 (aa)	XP_024124752	UPI000CF7D7D9
ENSOMET00000022588	-	555	-	ENSOMEP00000014632	184 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000016160's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000016160's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000016160	imp3	53	31.633	ENSOMEG00000010547	rps9	51	31.633

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000016160	imp3	100	91.803	ENSAPOG00000014720	imp3	100	91.803	Acanthochromis_polyacanthus
ENSOMEG00000016160	imp3	100	71.196	ENSAMEG00000019247	IMP3	100	71.196	Ailuropoda_melanoleuca
ENSOMEG00000016160	imp3	98	90.503	ENSACIG00000022070	imp3	96	90.503	Amphilophus_citrinellus
ENSOMEG00000016160	imp3	100	92.350	ENSAOCG00000015761	imp3	100	92.350	Amphiprion_ocellaris
ENSOMEG00000016160	imp3	100	91.803	ENSAPEG00000005250	imp3	100	91.803	Amphiprion_percula
ENSOMEG00000016160	imp3	100	92.896	ENSATEG00000020021	imp3	100	92.896	Anabas_testudineus
ENSOMEG00000016160	imp3	100	68.449	ENSACAG00000016259	IMP3	100	68.449	Anolis_carolinensis
ENSOMEG00000016160	imp3	100	69.565	ENSANAG00000016669	-	100	69.565	Aotus_nancymaae
ENSOMEG00000016160	imp3	99	59.341	ENSANAG00000036874	-	99	59.341	Aotus_nancymaae
ENSOMEG00000016160	imp3	100	92.350	ENSACLG00000009929	imp3	100	92.350	Astatotilapia_calliptera
ENSOMEG00000016160	imp3	96	84.000	ENSAMXG00000018715	imp3	99	84.000	Astyanax_mexicanus
ENSOMEG00000016160	imp3	99	51.381	WBGene00016740	C48B6.2	99	51.381	Caenorhabditis_elegans
ENSOMEG00000016160	imp3	100	69.565	ENSCJAG00000044585	IMP3	100	69.565	Callithrix_jacchus
ENSOMEG00000016160	imp3	100	69.022	ENSCAFG00000018039	IMP3	82	69.022	Canis_familiaris
ENSOMEG00000016160	imp3	100	69.022	ENSCAFG00020003760	-	100	69.022	Canis_lupus_dingo
ENSOMEG00000016160	imp3	100	57.065	ENSCAFG00020006737	-	100	57.609	Canis_lupus_dingo
ENSOMEG00000016160	imp3	100	70.652	ENSCHIG00000006295	IMP3	100	70.652	Capra_hircus
ENSOMEG00000016160	imp3	100	70.109	ENSTSYG00000005503	IMP3	100	70.109	Carlito_syrichta
ENSOMEG00000016160	imp3	100	70.652	ENSCPOG00000012016	IMP3	100	70.652	Cavia_porcellus
ENSOMEG00000016160	imp3	100	69.565	ENSCCAG00000002712	-	100	69.565	Cebus_capucinus
ENSOMEG00000016160	imp3	98	61.111	ENSCCAG00000023378	-	99	60.345	Cebus_capucinus
ENSOMEG00000016160	imp3	100	70.109	ENSCATG00000015188	IMP3	100	70.109	Cercocebus_atys
ENSOMEG00000016160	imp3	100	70.109	ENSCSAG00000019732	IMP3	100	70.109	Chlorocebus_sabaeus
ENSOMEG00000016160	imp3	100	70.652	ENSCHOG00000012046	IMP3	100	70.652	Choloepus_hoffmanni
ENSOMEG00000016160	imp3	100	64.865	ENSCPBG00000021662	IMP3	100	64.865	Chrysemys_picta_bellii
ENSOMEG00000016160	imp3	98	67.598	ENSCING00000004233	-	99	67.598	Ciona_intestinalis
ENSOMEG00000016160	imp3	99	67.956	ENSCSAVG00000000698	-	100	67.956	Ciona_savignyi
ENSOMEG00000016160	imp3	100	70.109	ENSCANG00000018342	IMP3	100	70.109	Colobus_angolensis_palliatus
ENSOMEG00000016160	imp3	100	68.478	ENSCGRG00001001326	Imp3	100	68.478	Cricetulus_griseus_chok1gshd
ENSOMEG00000016160	imp3	100	68.478	ENSCGRG00000018907	Imp3	100	68.478	Cricetulus_griseus_crigri
ENSOMEG00000016160	imp3	99	88.950	ENSCSEG00000017200	imp3	99	88.950	Cynoglossus_semilaevis
ENSOMEG00000016160	imp3	100	82.105	ENSCVAG00000019511	imp3	100	82.105	Cyprinodon_variegatus
ENSOMEG00000016160	imp3	100	84.153	ENSDARG00000115266	imp3	100	84.615	Danio_rerio
ENSOMEG00000016160	imp3	100	69.565	ENSDNOG00000015787	IMP3	81	69.565	Dasypus_novemcinctus
ENSOMEG00000016160	imp3	100	68.478	ENSDORG00000029301	Imp3	100	68.478	Dipodomys_ordii
ENSOMEG00000016160	imp3	99	61.878	FBgn0034232	CG4866	100	61.878	Drosophila_melanogaster
ENSOMEG00000016160	imp3	100	71.739	ENSETEG00000004278	IMP3	100	71.739	Echinops_telfairi
ENSOMEG00000016160	imp3	99	70.330	ENSEBUG00000002343	imp3	100	70.330	Eptatretus_burgeri
ENSOMEG00000016160	imp3	100	69.565	ENSEASG00005015693	IMP3	100	69.565	Equus_asinus_asinus
ENSOMEG00000016160	imp3	100	70.109	ENSECAG00000015786	IMP3	100	70.109	Equus_caballus
ENSOMEG00000016160	imp3	100	86.885	ENSELUG00000023264	imp3	100	86.885	Esox_lucius
ENSOMEG00000016160	imp3	100	70.109	ENSFCAG00000040328	IMP3	100	70.109	Felis_catus
ENSOMEG00000016160	imp3	71	55.725	ENSFALG00000014811	IMP3	99	58.015	Ficedula_albicollis
ENSOMEG00000016160	imp3	100	70.109	ENSFDAG00000018422	IMP3	100	70.109	Fukomys_damarensis
ENSOMEG00000016160	imp3	100	89.617	ENSFHEG00000016954	imp3	100	89.617	Fundulus_heteroclitus
ENSOMEG00000016160	imp3	100	86.339	ENSGMOG00000018162	imp3	100	86.339	Gadus_morhua
ENSOMEG00000016160	imp3	100	55.676	ENSGALG00000040238	IMP3	100	57.297	Gallus_gallus
ENSOMEG00000016160	imp3	100	91.257	ENSGAFG00000007425	imp3	100	91.257	Gambusia_affinis
ENSOMEG00000016160	imp3	100	87.432	ENSGACG00000015998	imp3	100	87.432	Gasterosteus_aculeatus
ENSOMEG00000016160	imp3	100	63.784	ENSGAGG00000008163	IMP3	100	63.784	Gopherus_agassizii
ENSOMEG00000016160	imp3	100	70.109	ENSGGOG00000025122	IMP3	100	70.109	Gorilla_gorilla
ENSOMEG00000016160	imp3	100	92.896	ENSHBUG00000018453	imp3	100	92.896	Haplochromis_burtoni
ENSOMEG00000016160	imp3	100	69.565	ENSHGLG00000019824	IMP3	100	69.565	Heterocephalus_glaber_female
ENSOMEG00000016160	imp3	100	69.565	ENSHGLG00100020660	IMP3	100	69.565	Heterocephalus_glaber_male
ENSOMEG00000016160	imp3	100	91.803	ENSHCOG00000020565	imp3	100	91.803	Hippocampus_comes
ENSOMEG00000016160	imp3	100	83.607	ENSIPUG00000013142	imp3	100	83.607	Ictalurus_punctatus
ENSOMEG00000016160	imp3	100	70.652	ENSSTOG00000030143	IMP3	100	70.652	Ictidomys_tridecemlineatus
ENSOMEG00000016160	imp3	100	91.803	ENSKMAG00000001956	imp3	100	91.803	Kryptolebias_marmoratus
ENSOMEG00000016160	imp3	100	91.257	ENSLBEG00000008178	imp3	100	91.257	Labrus_bergylta
ENSOMEG00000016160	imp3	100	80.328	ENSLACG00000022148	imp3	100	80.328	Latimeria_chalumnae
ENSOMEG00000016160	imp3	100	85.246	ENSLOCG00000010237	imp3	100	85.246	Lepisosteus_oculatus
ENSOMEG00000016160	imp3	100	69.565	ENSLAFG00000004425	IMP3	100	69.565	Loxodonta_africana
ENSOMEG00000016160	imp3	100	70.109	ENSMFAG00000008867	IMP3	100	70.109	Macaca_fascicularis
ENSOMEG00000016160	imp3	100	70.109	ENSMMUG00000016103	IMP3	100	70.109	Macaca_mulatta
ENSOMEG00000016160	imp3	100	70.109	ENSMNEG00000026328	IMP3	100	70.109	Macaca_nemestrina
ENSOMEG00000016160	imp3	100	91.803	ENSMAMG00000003215	imp3	100	91.803	Mastacembelus_armatus
ENSOMEG00000016160	imp3	100	92.350	ENSMZEG00005005544	imp3	100	92.350	Maylandia_zebra
ENSOMEG00000016160	imp3	100	69.022	ENSMAUG00000010279	Imp3	100	69.022	Mesocricetus_auratus
ENSOMEG00000016160	imp3	100	70.109	ENSMICG00000044149	IMP3	100	70.109	Microcebus_murinus
ENSOMEG00000016160	imp3	100	68.478	ENSMOCG00000008647	Imp3	100	68.478	Microtus_ochrogaster
ENSOMEG00000016160	imp3	96	94.286	ENSMMOG00000018117	imp3	84	94.286	Mola_mola
ENSOMEG00000016160	imp3	100	69.565	ENSMODG00000025193	IMP3	100	69.565	Monodelphis_domestica
ENSOMEG00000016160	imp3	100	92.350	ENSMALG00000006505	imp3	100	92.350	Monopterus_albus
ENSOMEG00000016160	imp3	100	69.022	MGP_CAROLIEiJ_G0032258	Imp3	100	69.022	Mus_caroli
ENSOMEG00000016160	imp3	100	69.022	ENSMUSG00000032288	Imp3	100	69.022	Mus_musculus
ENSOMEG00000016160	imp3	100	69.022	MGP_PahariEiJ_G0015125	Imp3	100	69.022	Mus_pahari
ENSOMEG00000016160	imp3	100	69.022	MGP_SPRETEiJ_G0033398	Imp3	100	69.022	Mus_spretus
ENSOMEG00000016160	imp3	100	70.652	ENSMPUG00000020147	IMP3	100	70.652	Mustela_putorius_furo
ENSOMEG00000016160	imp3	100	70.109	ENSMLUG00000014032	IMP3	100	70.109	Myotis_lucifugus
ENSOMEG00000016160	imp3	100	67.391	ENSNGAG00000017248	Imp3	100	67.391	Nannospalax_galili
ENSOMEG00000016160	imp3	100	92.350	ENSNBRG00000004060	imp3	100	92.350	Neolamprologus_brichardi
ENSOMEG00000016160	imp3	100	69.022	ENSOPRG00000015906	-	100	69.022	Ochotona_princeps
ENSOMEG00000016160	imp3	100	70.652	ENSODEG00000020194	IMP3	100	70.652	Octodon_degus
ENSOMEG00000016160	imp3	100	92.350	ENSONIG00000010661	imp3	100	92.350	Oreochromis_niloticus
ENSOMEG00000016160	imp3	100	70.109	ENSOCUG00000004690	IMP3	100	70.109	Oryctolagus_cuniculus
ENSOMEG00000016160	imp3	100	95.628	ENSORLG00000004484	imp3	100	95.628	Oryzias_latipes
ENSOMEG00000016160	imp3	100	95.628	ENSORLG00020003771	imp3	100	95.628	Oryzias_latipes_hni
ENSOMEG00000016160	imp3	100	95.082	ENSORLG00015006933	imp3	100	95.082	Oryzias_latipes_hsok
ENSOMEG00000016160	imp3	100	70.109	ENSOGAG00000004917	IMP3	100	70.109	Otolemur_garnettii
ENSOMEG00000016160	imp3	100	70.109	ENSPPAG00000009241	IMP3	100	70.109	Pan_paniscus
ENSOMEG00000016160	imp3	100	70.109	ENSPPRG00000018701	IMP3	100	70.109	Panthera_pardus
ENSOMEG00000016160	imp3	100	70.109	ENSPTRG00000052235	IMP3	100	70.109	Pan_troglodytes
ENSOMEG00000016160	imp3	100	70.109	ENSPANG00000013668	IMP3	100	70.109	Papio_anubis
ENSOMEG00000016160	imp3	100	86.339	ENSPKIG00000007169	imp3	100	86.339	Paramormyrops_kingsleyae
ENSOMEG00000016160	imp3	100	81.183	ENSPMGG00000009379	imp3	100	81.183	Periophthalmus_magnuspinnatus
ENSOMEG00000016160	imp3	100	68.478	ENSPEMG00000013003	Imp3	100	68.478	Peromyscus_maniculatus_bairdii
ENSOMEG00000016160	imp3	100	91.257	ENSPFOG00000016529	imp3	100	91.257	Poecilia_formosa
ENSOMEG00000016160	imp3	100	91.803	ENSPLAG00000013831	imp3	100	91.803	Poecilia_latipinna
ENSOMEG00000016160	imp3	100	90.710	ENSPMEG00000000797	imp3	100	90.710	Poecilia_mexicana
ENSOMEG00000016160	imp3	100	91.257	ENSPREG00000006885	imp3	100	91.257	Poecilia_reticulata
ENSOMEG00000016160	imp3	100	70.652	ENSPPYG00000006664	IMP3	100	70.652	Pongo_abelii
ENSOMEG00000016160	imp3	100	70.109	ENSPCAG00000006920	IMP3	100	70.109	Procavia_capensis
ENSOMEG00000016160	imp3	100	70.109	ENSPCOG00000012367	IMP3	100	70.109	Propithecus_coquereli
ENSOMEG00000016160	imp3	100	70.652	ENSPVAG00000010036	IMP3	100	70.652	Pteropus_vampyrus
ENSOMEG00000016160	imp3	100	92.350	ENSPNYG00000000324	imp3	100	92.350	Pundamilia_nyererei
ENSOMEG00000016160	imp3	100	87.978	ENSPNAG00000017113	imp3	100	87.978	Pygocentrus_nattereri
ENSOMEG00000016160	imp3	100	68.478	ENSRNOG00000017460	Imp3	100	68.478	Rattus_norvegicus
ENSOMEG00000016160	imp3	100	70.652	ENSRBIG00000024522	IMP3	100	70.652	Rhinopithecus_bieti
ENSOMEG00000016160	imp3	100	70.652	ENSRROG00000024157	IMP3	100	70.652	Rhinopithecus_roxellana
ENSOMEG00000016160	imp3	99	53.005	YHR148W	-	100	53.005	Saccharomyces_cerevisiae
ENSOMEG00000016160	imp3	100	69.565	ENSSBOG00000006542	-	100	69.565	Saimiri_boliviensis_boliviensis
ENSOMEG00000016160	imp3	99	60.440	ENSSBOG00000026404	-	99	60.440	Saimiri_boliviensis_boliviensis
ENSOMEG00000016160	imp3	99	67.033	ENSSHAG00000006200	IMP3	99	67.033	Sarcophilus_harrisii
ENSOMEG00000016160	imp3	100	86.885	ENSSFOG00015012483	imp3	100	86.885	Scleropages_formosus
ENSOMEG00000016160	imp3	100	93.443	ENSSMAG00000007865	imp3	100	93.443	Scophthalmus_maximus
ENSOMEG00000016160	imp3	100	92.896	ENSSDUG00000010594	imp3	100	92.896	Seriola_dumerili
ENSOMEG00000016160	imp3	100	92.896	ENSSLDG00000015587	imp3	100	92.896	Seriola_lalandi_dorsalis
ENSOMEG00000016160	imp3	100	69.565	ENSSARG00000009657	IMP3	100	69.565	Sorex_araneus
ENSOMEG00000016160	imp3	100	92.896	ENSSPAG00000002088	imp3	100	92.896	Stegastes_partitus
ENSOMEG00000016160	imp3	100	55.676	ENSTGUG00000013228	IMP3	100	57.297	Taeniopygia_guttata
ENSOMEG00000016160	imp3	99	92.857	ENSTRUG00000025783	imp3	99	92.857	Takifugu_rubripes
ENSOMEG00000016160	imp3	100	70.652	ENSUAMG00000022724	IMP3	100	70.652	Ursus_americanus
ENSOMEG00000016160	imp3	100	70.652	ENSUMAG00000003736	IMP3	100	70.652	Ursus_maritimus
ENSOMEG00000016160	imp3	100	68.478	ENSVVUG00000019589	IMP3	100	68.478	Vulpes_vulpes
ENSOMEG00000016160	imp3	96	92.571	ENSXCOG00000007392	imp3	96	92.571	Xiphophorus_couchianus
ENSOMEG00000016160	imp3	100	92.350	ENSXMAG00000023049	imp3	100	92.350	Xiphophorus_maculatus