EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOMEG00000016488 (Gene tree)
Gene ID: 112146836
Gene Symbol: srsf2b
Alias: -
Full Name: serine/arginine-rich splicing factor 2-like
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 3640 bases
Position: chrNVQA01000010.1:21775988-21779627
Accession: 112146836
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000031567	RRM_1	PF00076.22	3.9e-21	1	1
ENSOMEP00000031581	RRM_1	PF00076.22	3.9e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000022977	-	2763	-	ENSOMEP00000031581	213 (aa)	XP_024128625	UPI000CF7F797
ENSOMET00000022971	-	2129	-	ENSOMEP00000031567	213 (aa)	XP_024128625	UPI000CF7F797

Gene Model

Click here to download ENSOMEG00000016488's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000016488's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000016488	srsf2b	63	72.593	ENSG00000161547	SRSF2	75	91.753	Homo_sapiens
ENSOMEG00000016488	srsf2b	63	64.444	ENSAMEG00000013624	-	50	85.227	Ailuropoda_melanoleuca
ENSOMEG00000016488	srsf2b	66	75.887	ENSACIG00000018502	srsf2a	56	92.784	Amphilophus_citrinellus
ENSOMEG00000016488	srsf2b	56	85.833	ENSDARG00000057484	srsf2a	82	93.814	Danio_rerio
ENSOMEG00000016488	srsf2b	63	70.149	ENSDORG00000014460	Srsf2	50	86.275	Dipodomys_ordii
ENSOMEG00000016488	srsf2b	63	67.407	ENSFDAG00000012646	-	50	86.813	Fukomys_damarensis
ENSOMEG00000016488	srsf2b	63	64.925	ENSMLEG00000025525	SRSF2	50	87.234	Mandrillus_leucophaeus
ENSOMEG00000016488	srsf2b	84	65.363	ENSPMGG00000006860	-	58	94.845	Periophthalmus_magnuspinnatus