EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000016531 (Gene tree)
Gene ID: 112147455
Gene Symbol: trnau1apb
Alias: -
Full Name: tRNA selenocysteine 1-associated protein 1-like
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 8070 bases
Position: chrNVQA01000011.1:13038102-13046171
Accession: 112147455
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000014985	RRM_1	PF00076.22	9.8e-31	1	2
ENSOMEP00000014985	RRM_1	PF00076.22	9.8e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000023055	-	2878	-	ENSOMEP00000014985	345 (aa)	XP_024129631	UPI000CF7B441

Gene Model

Click here to download ENSOMEG00000016531's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000016531's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000016531	trnau1apb	50	30.857	ENSOMEG00000016484	tia1l	68	30.857
ENSOMEG00000016531	trnau1apb	96	42.814	ENSOMEG00000007873	trnau1apa	63	53.646
ENSOMEG00000016531	trnau1apb	50	32.571	ENSOMEG00000020931	tia1	68	32.571

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000016531	trnau1apb	99	74.419	ENSAPOG00000010086	trnau1apb	63	92.513	Acanthochromis_polyacanthus
ENSOMEG00000016531	trnau1apb	99	80.233	ENSACIG00000001863	trnau1apb	70	89.286	Amphilophus_citrinellus
ENSOMEG00000016531	trnau1apb	99	87.500	ENSAOCG00000011891	trnau1apb	100	76.453	Amphiprion_ocellaris
ENSOMEG00000016531	trnau1apb	99	83.721	ENSAPEG00000008029	trnau1apb	67	90.625	Amphiprion_percula
ENSOMEG00000016531	trnau1apb	99	88.372	ENSATEG00000002196	trnau1apb	100	79.360	Anabas_testudineus
ENSOMEG00000016531	trnau1apb	99	78.963	ENSACLG00000003016	trnau1apb	68	88.839	Astatotilapia_calliptera
ENSOMEG00000016531	trnau1apb	99	65.889	ENSAMXG00000001805	trnau1apb	63	80.000	Astyanax_mexicanus
ENSOMEG00000016531	trnau1apb	99	80.523	ENSCSEG00000018215	trnau1apb	66	86.222	Cynoglossus_semilaevis
ENSOMEG00000016531	trnau1apb	95	80.909	ENSCVAG00000017866	trnau1apb	100	76.667	Cyprinodon_variegatus
ENSOMEG00000016531	trnau1apb	99	63.006	ENSDARG00000056475	trnau1apb	63	78.000	Danio_rerio
ENSOMEG00000016531	trnau1apb	99	62.428	ENSELUG00000016683	trnau1apb	62	78.500	Esox_lucius
ENSOMEG00000016531	trnau1apb	100	84.770	ENSFHEG00000001267	trnau1apb	65	87.556	Fundulus_heteroclitus
ENSOMEG00000016531	trnau1apb	99	68.994	ENSGMOG00000001160	trnau1apb	67	87.500	Gadus_morhua
ENSOMEG00000016531	trnau1apb	99	67.052	ENSGAFG00000006770	trnau1apb	67	83.010	Gambusia_affinis
ENSOMEG00000016531	trnau1apb	99	77.035	ENSGACG00000014944	trnau1apb	68	88.393	Gasterosteus_aculeatus
ENSOMEG00000016531	trnau1apb	100	85.507	ENSHBUG00000018944	trnau1apb	100	67.733	Haplochromis_burtoni
ENSOMEG00000016531	trnau1apb	67	83.043	ENSHCOG00000011350	trnau1apb	71	80.804	Hippocampus_comes
ENSOMEG00000016531	trnau1apb	99	66.377	ENSIPUG00000008843	tsp1l	63	79.000	Ictalurus_punctatus
ENSOMEG00000016531	trnau1apb	64	88.636	ENSKMAG00000010082	trnau1apb	100	75.072	Kryptolebias_marmoratus
ENSOMEG00000016531	trnau1apb	99	83.140	ENSLBEG00000020480	trnau1apb	100	72.384	Labrus_bergylta
ENSOMEG00000016531	trnau1apb	99	54.155	ENSLOCG00000013175	trnau1apb	66	66.667	Lepisosteus_oculatus
ENSOMEG00000016531	trnau1apb	99	85.174	ENSMAMG00000012192	trnau1apb	100	72.965	Mastacembelus_armatus
ENSOMEG00000016531	trnau1apb	100	85.507	ENSMZEG00005014852	trnau1apb	66	88.889	Maylandia_zebra
ENSOMEG00000016531	trnau1apb	71	37.500	ENSMGAG00000003234	-	90	47.748	Meleagris_gallopavo
ENSOMEG00000016531	trnau1apb	97	75.072	ENSMMOG00000021521	trnau1apb	100	68.768	Mola_mola
ENSOMEG00000016531	trnau1apb	99	72.515	ENSMALG00000003772	trnau1apb	60	93.956	Monopterus_albus
ENSOMEG00000016531	trnau1apb	97	79.525	ENSNBRG00000000751	trnau1apb	70	88.839	Neolamprologus_brichardi
ENSOMEG00000016531	trnau1apb	99	73.900	ENSONIG00000016639	trnau1apb	75	88.688	Oreochromis_niloticus
ENSOMEG00000016531	trnau1apb	100	91.594	ENSORLG00000013265	trnau1apb	100	91.594	Oryzias_latipes
ENSOMEG00000016531	trnau1apb	100	94.203	ENSORLG00020004464	trnau1apb	100	91.768	Oryzias_latipes_hni
ENSOMEG00000016531	trnau1apb	100	93.913	ENSORLG00015021098	trnau1apb	100	91.884	Oryzias_latipes_hsok
ENSOMEG00000016531	trnau1apb	99	58.092	ENSPKIG00000007995	trnau1apb	63	78.061	Paramormyrops_kingsleyae
ENSOMEG00000016531	trnau1apb	77	77.500	ENSPMGG00000018509	trnau1apb	88	81.776	Periophthalmus_magnuspinnatus
ENSOMEG00000016531	trnau1apb	100	84.150	ENSPFOG00000003938	trnau1apb	100	78.674	Poecilia_formosa
ENSOMEG00000016531	trnau1apb	100	84.150	ENSPLAG00000015480	trnau1apb	100	78.674	Poecilia_latipinna
ENSOMEG00000016531	trnau1apb	100	84.150	ENSPMEG00000012743	trnau1apb	100	78.674	Poecilia_mexicana
ENSOMEG00000016531	trnau1apb	100	82.997	ENSPREG00000015035	trnau1apb	100	71.387	Poecilia_reticulata
ENSOMEG00000016531	trnau1apb	99	76.369	ENSPNYG00000012127	trnau1apb	68	84.821	Pundamilia_nyererei
ENSOMEG00000016531	trnau1apb	99	66.377	ENSPNAG00000019138	trnau1apb	62	80.000	Pygocentrus_nattereri
ENSOMEG00000016531	trnau1apb	99	60.857	ENSSFOG00015014158	trnau1apb	60	78.392	Scleropages_formosus
ENSOMEG00000016531	trnau1apb	99	79.592	ENSSMAG00000001745	trnau1apb	67	89.732	Scophthalmus_maximus
ENSOMEG00000016531	trnau1apb	99	86.880	ENSSDUG00000011109	trnau1apb	99	77.843	Seriola_dumerili
ENSOMEG00000016531	trnau1apb	99	86.589	ENSSLDG00000012947	trnau1apb	99	77.551	Seriola_lalandi_dorsalis
ENSOMEG00000016531	trnau1apb	99	88.663	ENSSPAG00000006917	trnau1apb	100	79.651	Stegastes_partitus
ENSOMEG00000016531	trnau1apb	100	76.638	ENSTRUG00000008608	trnau1apb	68	83.838	Takifugu_rubripes
ENSOMEG00000016531	trnau1apb	94	75.535	ENSXCOG00000007974	trnau1apb	54	92.500	Xiphophorus_couchianus
ENSOMEG00000016531	trnau1apb	100	84.438	ENSXMAG00000029918	trnau1apb	100	78.963	Xiphophorus_maculatus