EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSOMEG00000016618 (Gene tree)
Gene ID
112151656
Gene Symbol
pabpn1
Alias
-
Full Name
poly(A) binding protein nuclear 1
Gene Type
protein_coding
Species
Oryzias_melastigma
Status
putative
Strand
Minus strand
Length
15331 bases
Position
chrNVQA01000015.1:8758249-8773579
Accession
112151656
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSOMEP00000015058RRM_1PF00076.223.3e-1711
ENSOMEP00000015075RRM_1PF00076.223.9e-1711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSOMET00000023139-6204-ENSOMEP00000015075284 (aa)XP_024136457UPI000CF8012D
ENSOMET00000023125-3514-ENSOMEP00000015058268 (aa)--
Gene Model
Click here to download ENSOMEG00000016618's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000016618's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSOMEG00000016618pabpn17353.023ENSOMEG00000017896PABPN1L5652.074
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSOMEG00000016618pabpn16883.684ENSG00000100836PABPN19282.051Homo_sapiens
ENSOMEG00000016618pabpn16780.851ENSG00000258643BCL2L2-PABPN15384.270Homo_sapiens
ENSOMEG00000016618pabpn110098.592ENSAPOG00000016425pabpn110098.592Acanthochromis_polyacanthus
ENSOMEG00000016618pabpn16780.851ENSAMEG00000007048BCL2L2-PABPN19980.851Ailuropoda_melanoleuca
ENSOMEG00000016618pabpn110096.503ENSACIG00000021744pabpn110096.503Amphilophus_citrinellus
ENSOMEG00000016618pabpn18298.630ENSAOCG00000015805pabpn19598.636Amphiprion_ocellaris
ENSOMEG00000016618pabpn18298.630ENSAPEG00000009623pabpn19598.636Amphiprion_percula
ENSOMEG00000016618pabpn18299.087ENSATEG00000020531pabpn19599.091Anabas_testudineus
ENSOMEG00000016618pabpn16286.628ENSACAG00000006185-6981.026Anolis_carolinensis
ENSOMEG00000016618pabpn17080.612ENSANAG00000024513-8472.996Aotus_nancymaae
ENSOMEG00000016618pabpn110096.167ENSACLG00000016374pabpn110096.167Astatotilapia_calliptera
ENSOMEG00000016618pabpn110086.667ENSAMXG00000000452pabpn19597.738Astyanax_mexicanus
ENSOMEG00000016618pabpn16484.483ENSBTAG00000050594-7482.796Bos_taurus
ENSOMEG00000016618pabpn16685.165ENSBTAG00000006884PABPN18566.667Bos_taurus
ENSOMEG00000016618pabpn16879.474ENSBTAG00000053753-7179.474Bos_taurus
ENSOMEG00000016618pabpn15358.904WBGene00003904pabp-28655.000Caenorhabditis_elegans
ENSOMEG00000016618pabpn18373.160ENSCJAG00000007960-8373.593Callithrix_jacchus
ENSOMEG00000016618pabpn15976.506ENSCJAG00000004407-8376.506Callithrix_jacchus
ENSOMEG00000016618pabpn17279.412ENSCAFG00000011482PABPN18568.199Canis_familiaris
ENSOMEG00000016618pabpn17279.412ENSCAFG00020007298-6879.227Canis_lupus_dingo
ENSOMEG00000016618pabpn17279.412ENSCAFG00020006651-6879.227Canis_lupus_dingo
ENSOMEG00000016618pabpn17279.412ENSCHIG00000012184PABPN16879.227Capra_hircus
ENSOMEG00000016618pabpn16780.851ENSTSYG00000033996BCL2L2-PABPN19378.313Carlito_syrichta
ENSOMEG00000016618pabpn15083.704ENSCAPG00000009461-9982.014Cavia_aperea
ENSOMEG00000016618pabpn16982.143ENSCPOG00000025574PABPN16878.744Cavia_porcellus
ENSOMEG00000016618pabpn18373.160ENSCCAG00000033954BCL2L2-PABPN18373.593Cebus_capucinus
ENSOMEG00000016618pabpn18373.160ENSCATG00000038536BCL2L2-PABPN18373.593Cercocebus_atys
ENSOMEG00000016618pabpn17358.850ENSCLAG00000012423PABPN15282.014Chinchilla_lanigera
ENSOMEG00000016618pabpn17277.941ENSCSAG00000016036PABPN16877.778Chlorocebus_sabaeus
ENSOMEG00000016618pabpn17469.712ENSCHOG00000004798BCL2L2-PABPN18869.712Choloepus_hoffmanni
ENSOMEG00000016618pabpn15980.723ENSCPBG00000026060-9380.723Chrysemys_picta_bellii
ENSOMEG00000016618pabpn16959.223ENSCING00000012468-8464.000Ciona_intestinalis
ENSOMEG00000016618pabpn15761.272ENSCSAVG00000002001-8068.889Ciona_savignyi
ENSOMEG00000016618pabpn17168.878ENSCANG00000030980-8661.864Colobus_angolensis_palliatus
ENSOMEG00000016618pabpn16780.851ENSCANG00000009750BCL2L2-PABPN19378.313Colobus_angolensis_palliatus
ENSOMEG00000016618pabpn17278.922ENSCGRG00001019696Pabpn19377.711Cricetulus_griseus_chok1gshd
ENSOMEG00000016618pabpn15491.156ENSCGRG00000011102Pabpn19191.156Cricetulus_griseus_crigri
ENSOMEG00000016618pabpn18296.804ENSCSEG00000008774pabpn19795.495Cynoglossus_semilaevis
ENSOMEG00000016618pabpn110093.878ENSCVAG00000003152pabpn110093.878Cyprinodon_variegatus
ENSOMEG00000016618pabpn110095.423ENSDARG00000045373pabpn110096.774Danio_rerio
ENSOMEG00000016618pabpn16356.213ENSDARG00000087996pabpn1l8659.184Danio_rerio
ENSOMEG00000016618pabpn17279.412ENSDNOG00000023682PABPN16879.227Dasypus_novemcinctus
ENSOMEG00000016618pabpn17278.922ENSDORG00000028966-6878.744Dipodomys_ordii
ENSOMEG00000016618pabpn18258.407FBgn0005648Pabp29858.407Drosophila_melanogaster
ENSOMEG00000016618pabpn18370.996ENSEBUG00000002322pabpn19870.996Eptatretus_burgeri
ENSOMEG00000016618pabpn16982.653ENSEASG00005011716PABPN16879.227Equus_asinus_asinus
ENSOMEG00000016618pabpn16883.684ENSECAG00000011652PABPN16782.323Equus_caballus
ENSOMEG00000016618pabpn16980.612ENSEEUG00000012973-6681.347Erinaceus_europaeus
ENSOMEG00000016618pabpn17993.548ENSELUG00000022654pabpn19593.778Esox_lucius
ENSOMEG00000016618pabpn17279.412ENSFCAG00000031922PABPN16879.227Felis_catus
ENSOMEG00000016618pabpn15681.646ENSFDAG00000018381BCL2L2-PABPN19377.108Fukomys_damarensis
ENSOMEG00000016618pabpn18296.347ENSFHEG00000007215pabpn19596.364Fundulus_heteroclitus
ENSOMEG00000016618pabpn110091.930ENSGMOG00000003922pabpn110094.737Gadus_morhua
ENSOMEG00000016618pabpn16583.708ENSGALG00000052930-6180.288Gallus_gallus
ENSOMEG00000016618pabpn18297.738ENSGAFG00000017099pabpn19597.748Gambusia_affinis
ENSOMEG00000016618pabpn110097.183ENSGACG00000002167pabpn110097.183Gasterosteus_aculeatus
ENSOMEG00000016618pabpn17268.932ENSGGOG00000025919-9765.986Gorilla_gorilla
ENSOMEG00000016618pabpn17466.990ENSGGOG00000039675-9163.025Gorilla_gorilla
ENSOMEG00000016618pabpn18373.160ENSGGOG00000022683-8373.593Gorilla_gorilla
ENSOMEG00000016618pabpn18298.174ENSHBUG00000019523pabpn19598.182Haplochromis_burtoni
ENSOMEG00000016618pabpn15962.733ENSHGLG00000009842-9262.733Heterocephalus_glaber_female
ENSOMEG00000016618pabpn17370.647ENSHGLG00000018588-7074.468Heterocephalus_glaber_female
ENSOMEG00000016618pabpn17278.922ENSHGLG00000002927-9291.156Heterocephalus_glaber_female
ENSOMEG00000016618pabpn16385.057ENSHGLG00100006673-9291.156Heterocephalus_glaber_male
ENSOMEG00000016618pabpn17370.647ENSHGLG00100015565-8762.397Heterocephalus_glaber_male
ENSOMEG00000016618pabpn18297.717ENSHCOG00000004655pabpn19597.727Hippocampus_comes
ENSOMEG00000016618pabpn110083.562ENSIPUG00000008085PABPN19597.273Ictalurus_punctatus
ENSOMEG00000016618pabpn17988.679ENSIPUG00000000180-9985.714Ictalurus_punctatus
ENSOMEG00000016618pabpn15978.313ENSSTOG00000029847BCL2L2-PABPN19378.313Ictidomys_tridecemlineatus
ENSOMEG00000016618pabpn15978.313ENSJJAG00000023507Gm205219378.313Jaculus_jaculus
ENSOMEG00000016618pabpn110097.895ENSKMAG00000018748pabpn110097.895Kryptolebias_marmoratus
ENSOMEG00000016618pabpn110098.592ENSLBEG00000027266pabpn110098.592Labrus_bergylta
ENSOMEG00000016618pabpn16588.701ENSLACG00000000646pabpn19477.727Latimeria_chalumnae
ENSOMEG00000016618pabpn110091.579ENSLOCG00000000796pabpn110091.930Lepisosteus_oculatus
ENSOMEG00000016618pabpn16967.539ENSLOCG00000004694pabpn1l9863.679Lepisosteus_oculatus
ENSOMEG00000016618pabpn15378.523ENSLAFG00000031227-9978.523Loxodonta_africana
ENSOMEG00000016618pabpn15070.714ENSMFAG00000031355-9870.714Macaca_fascicularis
ENSOMEG00000016618pabpn16780.851ENSMFAG00000032183BCL2L2-PABPN19378.313Macaca_fascicularis
ENSOMEG00000016618pabpn17165.517ENSMMUG00000048382-6965.865Macaca_mulatta
ENSOMEG00000016618pabpn16780.851ENSMMUG00000014747BCL2L2-PABPN19977.931Macaca_mulatta
ENSOMEG00000016618pabpn16665.946ENSMNEG00000035750-9870.714Macaca_nemestrina
ENSOMEG00000016618pabpn18373.160ENSMNEG00000045065BCL2L2-PABPN18373.593Macaca_nemestrina
ENSOMEG00000016618pabpn15963.636ENSMLEG00000034623-9869.286Mandrillus_leucophaeus
ENSOMEG00000016618pabpn16780.851ENSMLEG00000043862BCL2L2-PABPN19378.313Mandrillus_leucophaeus
ENSOMEG00000016618pabpn110097.183ENSMAMG00000007979pabpn110097.183Mastacembelus_armatus
ENSOMEG00000016618pabpn110097.887ENSMZEG00005011904pabpn110097.887Maylandia_zebra
ENSOMEG00000016618pabpn17278.922ENSMAUG00000007383Gm205216978.744Mesocricetus_auratus
ENSOMEG00000016618pabpn18373.593ENSMICG00000010002BCL2L2-PABPN18373.593Microcebus_murinus
ENSOMEG00000016618pabpn17278.431ENSMOCG00000018557Gm205219091.156Microtus_ochrogaster
ENSOMEG00000016618pabpn110098.239ENSMMOG00000005405pabpn110098.239Mola_mola
ENSOMEG00000016618pabpn17175.598ENSMODG00000004535-6382.902Monodelphis_domestica
ENSOMEG00000016618pabpn110098.239ENSMALG00000019612pabpn110098.239Monopterus_albus
ENSOMEG00000016618pabpn16779.255MGP_CAROLIEiJ_G0019276Gm205215382.584Mus_caroli
ENSOMEG00000016618pabpn16882.105MGP_CAROLIEiJ_G0019277Pabpn19090.476Mus_caroli
ENSOMEG00000016618pabpn16882.632ENSMUSG00000022194Pabpn19090.476Mus_musculus
ENSOMEG00000016618pabpn16779.787ENSMUSG00000092232Gm205215383.146Mus_musculus
ENSOMEG00000016618pabpn16882.632MGP_PahariEiJ_G0030295Pabpn110095.238Mus_pahari
ENSOMEG00000016618pabpn16779.787MGP_PahariEiJ_G0030294Gm205215383.146Mus_pahari
ENSOMEG00000016618pabpn16779.787MGP_SPRETEiJ_G0020165Gm205215383.146Mus_spretus
ENSOMEG00000016618pabpn16882.632MGP_SPRETEiJ_G0020166Pabpn19090.476Mus_spretus
ENSOMEG00000016618pabpn15583.553ENSMPUG00000006775-9282.051Mustela_putorius_furo
ENSOMEG00000016618pabpn16779.787ENSMLUG00000003800-9979.787Myotis_lucifugus
ENSOMEG00000016618pabpn16880.214ENSMLUG00000012452-6579.293Myotis_lucifugus
ENSOMEG00000016618pabpn17078.061ENSMLUG00000028677-8470.085Myotis_lucifugus
ENSOMEG00000016618pabpn16780.851ENSNGAG00000019529Gm205215384.270Nannospalax_galili
ENSOMEG00000016618pabpn110098.239ENSNBRG00000023955pabpn110098.239Neolamprologus_brichardi
ENSOMEG00000016618pabpn17279.412ENSNLEG00000015007-7479.227Nomascus_leucogenys
ENSOMEG00000016618pabpn16770.588ENSNLEG00000030598-7770.526Nomascus_leucogenys
ENSOMEG00000016618pabpn15261.429ENSNLEG00000035292-9861.429Nomascus_leucogenys
ENSOMEG00000016618pabpn17278.922ENSODEG00000002083BCL2L2-PABPN16878.744Octodon_degus
ENSOMEG00000016618pabpn15974.233ENSODEG00000011555-8173.026Octodon_degus
ENSOMEG00000016618pabpn17272.727ENSODEG00000003739-7072.637Octodon_degus
ENSOMEG00000016618pabpn110098.239ENSONIG00000008112pabpn110098.239Oreochromis_niloticus
ENSOMEG00000016618pabpn15180.000ENSOANG00000009218-9980.000Ornithorhynchus_anatinus
ENSOMEG00000016618pabpn17278.922ENSOCUG00000016174PABPN17678.744Oryctolagus_cuniculus
ENSOMEG00000016618pabpn110099.296ENSORLG00000027900pabpn110099.296Oryzias_latipes
ENSOMEG00000016618pabpn110096.575ENSORLG00020004681pabpn110096.575Oryzias_latipes_hni
ENSOMEG00000016618pabpn110096.575ENSORLG00015000018pabpn110096.575Oryzias_latipes_hsok
ENSOMEG00000016618pabpn17279.412ENSOGAG00000008710PABPN16879.227Otolemur_garnettii
ENSOMEG00000016618pabpn16780.851ENSOARG00000019336BCL2L2-PABPN15280.851Ovis_aries
ENSOMEG00000016618pabpn15964.024ENSPPAG00000039421-9364.024Pan_paniscus
ENSOMEG00000016618pabpn16780.851ENSPPAG00000028984BCL2L2-PABPN19282.051Pan_paniscus
ENSOMEG00000016618pabpn17279.412ENSPPRG00000010567PABPN16879.227Panthera_pardus
ENSOMEG00000016618pabpn15978.313ENSPTIG00000001063BCL2L2-PABPN19378.313Panthera_tigris_altaica
ENSOMEG00000016618pabpn18373.160ENSPTRG00000006167BCL2L28373.593Pan_troglodytes
ENSOMEG00000016618pabpn18460.776ENSPTRG00000047273-9258.000Pan_troglodytes
ENSOMEG00000016618pabpn18373.160ENSPANG00000021100BCL2L2-PABPN18373.593Papio_anubis
ENSOMEG00000016618pabpn17066.837ENSPANG00000023326-9871.429Papio_anubis
ENSOMEG00000016618pabpn16169.512ENSPKIG00000008340pabpn1l8667.039Paramormyrops_kingsleyae
ENSOMEG00000016618pabpn110088.811ENSPKIG00000018052pabpn110091.958Paramormyrops_kingsleyae
ENSOMEG00000016618pabpn110095.070ENSPKIG00000008144-10095.070Paramormyrops_kingsleyae
ENSOMEG00000016618pabpn15076.866ENSPSIG00000011959-9576.866Pelodiscus_sinensis
ENSOMEG00000016618pabpn110093.310ENSPMGG00000022027pabpn110093.310Periophthalmus_magnuspinnatus
ENSOMEG00000016618pabpn17278.922ENSPEMG00000008332Gm205218991.156Peromyscus_maniculatus_bairdii
ENSOMEG00000016618pabpn16875.269ENSPMAG00000006212pabpn19865.984Petromyzon_marinus
ENSOMEG00000016618pabpn17079.688ENSPCIG00000027751-6878.744Phascolarctos_cinereus
ENSOMEG00000016618pabpn110094.558ENSPFOG00000010351pabpn110094.558Poecilia_formosa
ENSOMEG00000016618pabpn110097.203ENSPLAG00000022696pabpn110097.203Poecilia_latipinna
ENSOMEG00000016618pabpn18297.285ENSPMEG00000020856pabpn19597.297Poecilia_mexicana
ENSOMEG00000016618pabpn110097.552ENSPREG00000011278pabpn110097.552Poecilia_reticulata
ENSOMEG00000016618pabpn16883.684ENSPPYG00000005663PABPN16983.420Pongo_abelii
ENSOMEG00000016618pabpn16869.271ENSPCAG00000005902PABPN16669.231Procavia_capensis
ENSOMEG00000016618pabpn18373.593ENSPCOG00000028047BCL2L2-PABPN18373.593Propithecus_coquereli
ENSOMEG00000016618pabpn17378.261ENSPVAG00000005270PABPN16878.261Pteropus_vampyrus
ENSOMEG00000016618pabpn18298.174ENSPNYG00000013182pabpn19598.182Pundamilia_nyererei
ENSOMEG00000016618pabpn15969.620ENSPNAG00000021666pabpn1l9864.677Pygocentrus_nattereri
ENSOMEG00000016618pabpn110095.423ENSPNAG00000023526pabpn19995.423Pygocentrus_nattereri
ENSOMEG00000016618pabpn17278.922ENSRNOG00000042195Pabpn16978.744Rattus_norvegicus
ENSOMEG00000016618pabpn17371.429ENSRBIG00000042811-8770.732Rhinopithecus_bieti
ENSOMEG00000016618pabpn17470.000ENSRBIG00000039547-7668.116Rhinopithecus_bieti
ENSOMEG00000016618pabpn16385.632ENSRBIG00000040762BCL2L2-PABPN15485.632Rhinopithecus_bieti
ENSOMEG00000016618pabpn17366.667ENSRROG00000036409-8356.654Rhinopithecus_roxellana
ENSOMEG00000016618pabpn17369.756ENSRROG00000040409-7667.633Rhinopithecus_roxellana
ENSOMEG00000016618pabpn16385.632ENSRROG00000045535BCL2L2-PABPN19378.313Rhinopithecus_roxellana
ENSOMEG00000016618pabpn16775.622ENSSBOG00000026930BCL2L2-PABPN19282.051Saimiri_boliviensis_boliviensis
ENSOMEG00000016618pabpn16776.804ENSSHAG00000014841-8680.319Sarcophilus_harrisii
ENSOMEG00000016618pabpn18357.203ENSSHAG00000007707-9857.203Sarcophilus_harrisii
ENSOMEG00000016618pabpn18296.347ENSSFOG00015014718pabpn19596.364Scleropages_formosus
ENSOMEG00000016618pabpn16465.027ENSSFOG00015015833pabpn1l8466.120Scleropages_formosus
ENSOMEG00000016618pabpn110089.474ENSSFOG00015012565pabpn110089.474Scleropages_formosus
ENSOMEG00000016618pabpn110098.239ENSSMAG00000020157pabpn110098.239Scophthalmus_maximus
ENSOMEG00000016618pabpn110098.592ENSSDUG00000020582pabpn110098.592Seriola_dumerili
ENSOMEG00000016618pabpn18299.087ENSSLDG00000007118pabpn19599.091Seriola_lalandi_dorsalis
ENSOMEG00000016618pabpn15386.301ENSSPUG00000018308-8784.615Sphenodon_punctatus
ENSOMEG00000016618pabpn110097.544ENSSPAG00000021658pabpn110097.544Stegastes_partitus
ENSOMEG00000016618pabpn16982.653ENSSSCG00000002023PABPN16879.227Sus_scrofa
ENSOMEG00000016618pabpn16966.667ENSSSCG00000034805-8454.741Sus_scrofa
ENSOMEG00000016618pabpn110097.183ENSTRUG00000023664pabpn110097.183Takifugu_rubripes
ENSOMEG00000016618pabpn17598.020ENSTNIG00000005369pabpn19498.020Tetraodon_nigroviridis
ENSOMEG00000016618pabpn17279.412ENSUAMG00000024460PABPN16879.227Ursus_americanus
ENSOMEG00000016618pabpn16584.444ENSUMAG00000014288BCL2L2-PABPN15484.444Ursus_maritimus
ENSOMEG00000016618pabpn16780.851ENSVVUG00000019912BCL2L2-PABPN17679.688Vulpes_vulpes
ENSOMEG00000016618pabpn16982.990ENSXETG00000014597pabpn16983.333Xenopus_tropicalis
ENSOMEG00000016618pabpn16085.185ENSXCOG00000005158pabpn19185.276Xiphophorus_couchianus
ENSOMEG00000016618pabpn110095.238ENSXMAG00000006196pabpn110095.238Xiphophorus_maculatus

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