EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000016626 (Gene tree)
Gene ID: 112157434
Gene Symbol: -
Alias: -
Full Name: transcription activator BRG1-like
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 19645 bases
Position: chrNVQA01000022.1:9938698-9958342
Accession: 112157434
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000015028	ResIII	PF04851.15	1.9e-08	1	1
ENSOMEP00000031656	ResIII	PF04851.15	1.9e-08	1	1
ENSOMEP00000015028	BRK	PF07533.16	6.8e-16	1	1
ENSOMEP00000031656	BRK	PF07533.16	6.8e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000023138	-	7041	XM_024290152	ENSOMEP00000031656	1661 (aa)	XP_024145920	UPI000CF7E62C
ENSOMET00000033793	-	747	-	ENSOMEP00000031590	248 (aa)	-	-
ENSOMET00000023079	-	7138	XM_024290152	ENSOMEP00000015028	1661 (aa)	XP_024145920	UPI000CF7E62C

Gene Model

Click here to download ENSOMEG00000016626's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000016626's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000016626	-	99	69.783	ENSOMEG00000009736	-	94	70.025
ENSOMEG00000016626	-	95	82.870	ENSOMEG00000007486	smarca4a	97	84.266

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000016626	-	99	83.553	ENSG00000127616	SMARCA4	99	95.652	Homo_sapiens
ENSOMEG00000016626	-	74	87.740	ENSAPOG00000003509	smarca4a	98	87.171	Acanthochromis_polyacanthus
ENSOMEG00000016626	-	95	94.305	ENSAPOG00000004542	SMARCA4	95	94.491	Acanthochromis_polyacanthus
ENSOMEG00000016626	-	99	79.769	ENSAMEG00000010868	SMARCA4	96	79.594	Ailuropoda_melanoleuca
ENSOMEG00000016626	-	95	87.144	ENSACIG00000003035	-	95	93.962	Amphilophus_citrinellus
ENSOMEG00000016626	-	95	85.073	ENSACIG00000021550	smarca4a	95	85.237	Amphilophus_citrinellus
ENSOMEG00000016626	-	70	91.696	ENSAOCG00000019167	smarca4a	96	81.919	Amphiprion_ocellaris
ENSOMEG00000016626	-	100	93.939	ENSAPEG00000023108	-	97	94.165	Amphiprion_percula
ENSOMEG00000016626	-	70	91.782	ENSAPEG00000015559	smarca4a	96	81.989	Amphiprion_percula
ENSOMEG00000016626	-	99	93.598	ENSATEG00000001094	-	94	93.817	Anabas_testudineus
ENSOMEG00000016626	-	95	84.577	ENSATEG00000011524	smarca4a	97	84.534	Anabas_testudineus
ENSOMEG00000016626	-	99	83.424	ENSANAG00000036991	SMARCA4	96	80.357	Aotus_nancymaae
ENSOMEG00000016626	-	95	83.922	ENSACLG00000000163	smarca4a	93	85.415	Astatotilapia_calliptera
ENSOMEG00000016626	-	95	94.651	ENSACLG00000008638	-	95	94.589	Astatotilapia_calliptera
ENSOMEG00000016626	-	97	81.331	ENSAMXG00000021023	smarca4a	97	85.470	Astyanax_mexicanus
ENSOMEG00000016626	-	94	87.054	ENSAMXG00000011238	-	95	89.812	Astyanax_mexicanus
ENSOMEG00000016626	-	99	83.513	ENSBTAG00000019220	SMARCA4	96	83.406	Bos_taurus
ENSOMEG00000016626	-	97	86.660	ENSCJAG00000005936	SMARCA4	96	79.797	Callithrix_jacchus
ENSOMEG00000016626	-	99	83.612	ENSCAFG00000017584	SMARCA4	96	83.509	Canis_familiaris
ENSOMEG00000016626	-	99	83.612	ENSCAFG00020024620	SMARCA4	95	83.509	Canis_lupus_dingo
ENSOMEG00000016626	-	98	79.854	ENSCHIG00000015318	SMARCA4	96	79.702	Capra_hircus
ENSOMEG00000016626	-	99	83.463	ENSTSYG00000012966	SMARCA4	96	83.416	Carlito_syrichta
ENSOMEG00000016626	-	94	77.479	ENSCAPG00000015932	SMARCA4	89	89.861	Cavia_aperea
ENSOMEG00000016626	-	99	83.767	ENSCPOG00000015549	SMARCA4	96	83.509	Cavia_porcellus
ENSOMEG00000016626	-	99	80.595	ENSCCAG00000031660	SMARCA4	95	80.580	Cebus_capucinus
ENSOMEG00000016626	-	99	83.553	ENSCATG00000029530	SMARCA4	96	83.509	Cercocebus_atys
ENSOMEG00000016626	-	99	83.583	ENSCLAG00000011946	SMARCA4	96	83.602	Chinchilla_lanigera
ENSOMEG00000016626	-	99	83.094	ENSCPBG00000009994	SMARCA4	96	83.509	Chrysemys_picta_bellii
ENSOMEG00000016626	-	99	83.433	ENSCANG00000036013	SMARCA4	96	83.509	Colobus_angolensis_palliatus
ENSOMEG00000016626	-	99	83.433	ENSCGRG00001016732	Smarca4	96	83.385	Cricetulus_griseus_chok1gshd
ENSOMEG00000016626	-	99	83.433	ENSCGRG00000017242	Smarca4	96	83.385	Cricetulus_griseus_crigri
ENSOMEG00000016626	-	95	82.661	ENSCSEG00000014771	smarca4a	97	84.089	Cynoglossus_semilaevis
ENSOMEG00000016626	-	95	83.617	ENSCVAG00000006979	smarca4a	96	84.078	Cyprinodon_variegatus
ENSOMEG00000016626	-	99	88.307	ENSCVAG00000003018	-	89	93.759	Cyprinodon_variegatus
ENSOMEG00000016626	-	92	84.434	ENSDARG00000104339	SMARCA4	94	84.866	Danio_rerio
ENSOMEG00000016626	-	97	84.988	ENSDARG00000077226	smarca4a	96	85.028	Danio_rerio
ENSOMEG00000016626	-	80	82.942	ENSDNOG00000048847	SMARCA4	90	90.358	Dasypus_novemcinctus
ENSOMEG00000016626	-	86	78.437	ENSDORG00000002544	Smarca4	87	79.084	Dipodomys_ordii
ENSOMEG00000016626	-	94	73.000	ENSETEG00000013361	SMARCA4	90	71.966	Echinops_telfairi
ENSOMEG00000016626	-	96	87.330	ENSEASG00005006167	SMARCA4	95	83.385	Equus_asinus_asinus
ENSOMEG00000016626	-	99	83.707	ENSECAG00000008334	SMARCA4	96	83.447	Equus_caballus
ENSOMEG00000016626	-	96	82.193	ENSELUG00000023232	-	94	85.593	Esox_lucius
ENSOMEG00000016626	-	99	82.562	ENSELUG00000010247	smarca4a	95	82.671	Esox_lucius
ENSOMEG00000016626	-	99	83.582	ENSFCAG00000004894	SMARCA4	96	83.478	Felis_catus
ENSOMEG00000016626	-	92	83.930	ENSFDAG00000012237	SMARCA4	93	83.762	Fukomys_damarensis
ENSOMEG00000016626	-	95	82.484	ENSFHEG00000010182	smarca4a	97	83.508	Fundulus_heteroclitus
ENSOMEG00000016626	-	100	93.900	ENSFHEG00000007902	-	97	93.816	Fundulus_heteroclitus
ENSOMEG00000016626	-	90	84.464	ENSGMOG00000005756	-	90	83.849	Gadus_morhua
ENSOMEG00000016626	-	87	79.511	ENSGMOG00000002649	smarca4a	92	80.357	Gadus_morhua
ENSOMEG00000016626	-	74	81.840	ENSGALG00000047145	SMARCA4	95	81.409	Gallus_gallus
ENSOMEG00000016626	-	87	87.388	ENSGAFG00000014900	smarca4a	97	87.457	Gambusia_affinis
ENSOMEG00000016626	-	99	86.076	ENSGAFG00000008827	-	98	85.527	Gambusia_affinis
ENSOMEG00000016626	-	99	85.447	ENSGACG00000016033	-	97	84.964	Gasterosteus_aculeatus
ENSOMEG00000016626	-	95	83.869	ENSGACG00000006691	smarca4a	97	83.333	Gasterosteus_aculeatus
ENSOMEG00000016626	-	99	83.303	ENSGAGG00000016757	SMARCA4	96	83.727	Gopherus_agassizii
ENSOMEG00000016626	-	99	83.433	ENSGGOG00000009882	SMARCA4	96	83.509	Gorilla_gorilla
ENSOMEG00000016626	-	95	84.543	ENSHBUG00000021172	smarca4a	97	84.969	Haplochromis_burtoni
ENSOMEG00000016626	-	100	95.003	ENSHBUG00000005447	-	97	95.081	Haplochromis_burtoni
ENSOMEG00000016626	-	99	83.095	ENSHGLG00000010519	SMARCA4	96	83.097	Heterocephalus_glaber_female
ENSOMEG00000016626	-	99	83.284	ENSHGLG00100013774	SMARCA4	96	82.735	Heterocephalus_glaber_male
ENSOMEG00000016626	-	91	84.428	ENSHCOG00000009510	smarca4a	93	84.938	Hippocampus_comes
ENSOMEG00000016626	-	97	85.390	ENSIPUG00000016346	-	89	90.048	Ictalurus_punctatus
ENSOMEG00000016626	-	99	85.018	ENSIPUG00000006107	smarca4a	96	84.950	Ictalurus_punctatus
ENSOMEG00000016626	-	99	83.672	ENSSTOG00000007939	SMARCA4	96	83.509	Ictidomys_tridecemlineatus
ENSOMEG00000016626	-	99	81.818	ENSJJAG00000012877	Smarca4	96	81.360	Jaculus_jaculus
ENSOMEG00000016626	-	97	94.070	ENSKMAG00000019518	-	97	93.939	Kryptolebias_marmoratus
ENSOMEG00000016626	-	96	82.877	ENSKMAG00000011931	smarca4a	97	83.923	Kryptolebias_marmoratus
ENSOMEG00000016626	-	91	81.812	ENSLBEG00000017383	smarca4a	94	81.018	Labrus_bergylta
ENSOMEG00000016626	-	95	87.869	ENSLBEG00000020655	-	88	88.025	Labrus_bergylta
ENSOMEG00000016626	-	99	80.545	ENSLOCG00000007820	smarca4a	89	84.472	Lepisosteus_oculatus
ENSOMEG00000016626	-	99	83.463	ENSLAFG00000001433	SMARCA4	96	83.416	Loxodonta_africana
ENSOMEG00000016626	-	99	83.553	ENSMFAG00000032146	SMARCA4	95	83.509	Macaca_fascicularis
ENSOMEG00000016626	-	99	83.767	ENSMMUG00000012042	SMARCA4	97	90.330	Macaca_mulatta
ENSOMEG00000016626	-	99	83.543	ENSMNEG00000028512	SMARCA4	96	83.437	Macaca_nemestrina
ENSOMEG00000016626	-	99	83.204	ENSMLEG00000034976	SMARCA4	96	83.292	Mandrillus_leucophaeus
ENSOMEG00000016626	-	100	93.791	ENSMAMG00000002841	-	97	93.951	Mastacembelus_armatus
ENSOMEG00000016626	-	96	87.653	ENSMAMG00000009256	smarca4a	98	89.570	Mastacembelus_armatus
ENSOMEG00000016626	-	95	84.426	ENSMZEG00005003889	smarca4a	97	84.854	Maylandia_zebra
ENSOMEG00000016626	-	95	95.311	ENSMZEG00005023861	-	95	95.404	Maylandia_zebra
ENSOMEG00000016626	-	99	83.403	ENSMAUG00000020731	Smarca4	96	83.292	Mesocricetus_auratus
ENSOMEG00000016626	-	99	83.582	ENSMICG00000009806	SMARCA4	96	83.478	Microcebus_murinus
ENSOMEG00000016626	-	99	83.164	ENSMOCG00000022209	Smarca4	96	83.106	Microtus_ochrogaster
ENSOMEG00000016626	-	91	82.218	ENSMMOG00000007571	smarca4a	94	83.934	Mola_mola
ENSOMEG00000016626	-	99	82.374	ENSMODG00000006287	SMARCA4	96	81.973	Monodelphis_domestica
ENSOMEG00000016626	-	95	83.828	ENSMALG00000003388	smarca4a	97	84.295	Monopterus_albus
ENSOMEG00000016626	-	90	86.355	ENSMALG00000021534	-	96	88.006	Monopterus_albus
ENSOMEG00000016626	-	99	83.313	MGP_CAROLIEiJ_G0031879	Smarca4	100	85.984	Mus_caroli
ENSOMEG00000016626	-	99	83.313	ENSMUSG00000032187	Smarca4	99	85.984	Mus_musculus
ENSOMEG00000016626	-	99	83.213	MGP_PahariEiJ_G0014745	Smarca4	100	85.861	Mus_pahari
ENSOMEG00000016626	-	99	83.313	MGP_SPRETEiJ_G0033003	Smarca4	100	85.984	Mus_spretus
ENSOMEG00000016626	-	99	83.612	ENSMPUG00000005711	SMARCA4	96	83.509	Mustela_putorius_furo
ENSOMEG00000016626	-	99	83.672	ENSMLUG00000004491	-	96	83.571	Myotis_lucifugus
ENSOMEG00000016626	-	99	83.153	ENSNGAG00000021852	Smarca4	96	83.282	Nannospalax_galili
ENSOMEG00000016626	-	90	89.516	ENSNBRG00000018865	-	99	89.162	Neolamprologus_brichardi
ENSOMEG00000016626	-	91	82.752	ENSNBRG00000011457	smarca4a	93	82.700	Neolamprologus_brichardi
ENSOMEG00000016626	-	95	80.928	ENSNLEG00000012389	SMARCA4	91	80.797	Nomascus_leucogenys
ENSOMEG00000016626	-	77	93.103	ENSOPRG00000000885	-	76	93.103	Ochotona_princeps
ENSOMEG00000016626	-	99	82.105	ENSODEG00000017127	SMARCA4	96	80.293	Octodon_degus
ENSOMEG00000016626	-	99	95.120	ENSONIG00000018040	-	97	95.265	Oreochromis_niloticus
ENSOMEG00000016626	-	95	84.217	ENSONIG00000008196	smarca4a	97	84.845	Oreochromis_niloticus
ENSOMEG00000016626	-	98	78.274	ENSOCUG00000001787	SMARCA4	94	77.827	Oryctolagus_cuniculus
ENSOMEG00000016626	-	100	98.616	ENSORLG00000003955	-	100	98.616	Oryzias_latipes
ENSOMEG00000016626	-	95	83.270	ENSORLG00000015452	smarca4a	97	83.871	Oryzias_latipes
ENSOMEG00000016626	-	100	98.737	ENSORLG00020009728	-	100	98.737	Oryzias_latipes_hni
ENSOMEG00000016626	-	95	83.039	ENSORLG00020004611	smarca4a	97	84.171	Oryzias_latipes_hni
ENSOMEG00000016626	-	100	98.255	ENSORLG00015007739	-	100	98.255	Oryzias_latipes_hsok
ENSOMEG00000016626	-	95	83.081	ENSORLG00015016560	smarca4a	97	83.861	Oryzias_latipes_hsok
ENSOMEG00000016626	-	90	82.357	ENSOGAG00000016148	SMARCA4	96	82.259	Otolemur_garnettii
ENSOMEG00000016626	-	99	82.974	ENSOARG00000017454	SMARCA4	94	83.972	Ovis_aries
ENSOMEG00000016626	-	99	83.433	ENSPPAG00000043191	SMARCA4	96	83.509	Pan_paniscus
ENSOMEG00000016626	-	99	83.582	ENSPPRG00000000064	SMARCA4	96	83.478	Panthera_pardus
ENSOMEG00000016626	-	93	85.241	ENSPTIG00000017447	SMARCA4	96	77.374	Panthera_tigris_altaica
ENSOMEG00000016626	-	99	83.433	ENSPTRG00000010488	SMARCA4	96	83.509	Pan_troglodytes
ENSOMEG00000016626	-	99	83.603	ENSPANG00000011042	SMARCA4	95	83.251	Papio_anubis
ENSOMEG00000016626	-	95	86.671	ENSPKIG00000007770	SMARCA4	96	86.035	Paramormyrops_kingsleyae
ENSOMEG00000016626	-	95	86.211	ENSPKIG00000010087	-	96	86.004	Paramormyrops_kingsleyae
ENSOMEG00000016626	-	88	79.780	ENSPSIG00000005547	SMARCA4	96	77.852	Pelodiscus_sinensis
ENSOMEG00000016626	-	99	83.224	ENSPEMG00000020389	Smarca4	96	83.168	Peromyscus_maniculatus_bairdii
ENSOMEG00000016626	-	99	83.832	ENSPCIG00000017138	SMARCA4	96	84.037	Phascolarctos_cinereus
ENSOMEG00000016626	-	96	82.695	ENSPFOG00000007892	smarca4a	97	82.614	Poecilia_formosa
ENSOMEG00000016626	-	100	93.126	ENSPFOG00000012930	-	97	93.263	Poecilia_formosa
ENSOMEG00000016626	-	96	83.066	ENSPLAG00000014294	smarca4a	97	82.737	Poecilia_latipinna
ENSOMEG00000016626	-	81	96.945	ENSPLAG00000018616	-	96	90.218	Poecilia_latipinna
ENSOMEG00000016626	-	92	83.800	ENSPMEG00000003725	smarca4a	93	83.561	Poecilia_mexicana
ENSOMEG00000016626	-	95	93.995	ENSPMEG00000008929	-	97	93.259	Poecilia_mexicana
ENSOMEG00000016626	-	95	80.051	ENSPREG00000014608	smarca4a	97	82.954	Poecilia_reticulata
ENSOMEG00000016626	-	95	93.770	ENSPREG00000014823	-	93	93.807	Poecilia_reticulata
ENSOMEG00000016626	-	99	81.935	ENSPPYG00000009568	SMARCA4	96	81.360	Pongo_abelii
ENSOMEG00000016626	-	80	81.457	ENSPCAG00000014054	SMARCA4	73	81.457	Procavia_capensis
ENSOMEG00000016626	-	99	83.493	ENSPCOG00000023011	SMARCA4	96	83.354	Propithecus_coquereli
ENSOMEG00000016626	-	95	74.359	ENSPVAG00000007787	SMARCA4	92	73.518	Pteropus_vampyrus
ENSOMEG00000016626	-	95	86.637	ENSPNYG00000023995	-	95	93.741	Pundamilia_nyererei
ENSOMEG00000016626	-	95	81.996	ENSPNYG00000000717	smarca4a	93	85.537	Pundamilia_nyererei
ENSOMEG00000016626	-	97	80.067	ENSPNAG00000024136	smarca4a	98	80.522	Pygocentrus_nattereri
ENSOMEG00000016626	-	95	87.587	ENSPNAG00000006636	-	93	88.081	Pygocentrus_nattereri
ENSOMEG00000016626	-	99	83.313	ENSRNOG00000009271	Smarca4	96	83.261	Rattus_norvegicus
ENSOMEG00000016626	-	99	83.323	ENSRBIG00000038696	SMARCA4	95	83.447	Rhinopithecus_bieti
ENSOMEG00000016626	-	99	83.433	ENSRROG00000045509	SMARCA4	96	83.509	Rhinopithecus_roxellana
ENSOMEG00000016626	-	99	83.707	ENSSBOG00000026896	SMARCA4	95	83.668	Saimiri_boliviensis_boliviensis
ENSOMEG00000016626	-	99	83.713	ENSSHAG00000001642	SMARCA4	96	83.913	Sarcophilus_harrisii
ENSOMEG00000016626	-	99	85.966	ENSSFOG00015013823	smarca4	96	85.367	Scleropages_formosus
ENSOMEG00000016626	-	95	81.382	ENSSFOG00015009921	-	92	91.141	Scleropages_formosus
ENSOMEG00000016626	-	100	91.208	ENSSMAG00000014082	-	97	91.538	Scophthalmus_maximus
ENSOMEG00000016626	-	95	83.615	ENSSMAG00000003200	smarca4a	97	83.436	Scophthalmus_maximus
ENSOMEG00000016626	-	99	94.089	ENSSDUG00000005388	-	95	94.798	Seriola_dumerili
ENSOMEG00000016626	-	95	79.473	ENSSDUG00000017298	smarca4a	96	79.654	Seriola_dumerili
ENSOMEG00000016626	-	95	84.355	ENSSLDG00000024486	smarca4a	97	84.473	Seriola_lalandi_dorsalis
ENSOMEG00000016626	-	60	97.516	ENSSARG00000013477	SMARCA4	82	97.516	Sorex_araneus
ENSOMEG00000016626	-	95	80.087	ENSSPUG00000004558	SMARCA4	94	80.261	Sphenodon_punctatus
ENSOMEG00000016626	-	95	83.667	ENSSPAG00000004248	smarca4a	97	84.042	Stegastes_partitus
ENSOMEG00000016626	-	100	93.709	ENSSPAG00000012533	-	97	94.049	Stegastes_partitus
ENSOMEG00000016626	-	99	83.701	ENSSSCG00000013629	SMARCA4	96	83.478	Sus_scrofa
ENSOMEG00000016626	-	51	84.298	ENSTGUG00000015488	-	98	84.067	Taeniopygia_guttata
ENSOMEG00000016626	-	95	91.825	ENSTRUG00000001378	SMARCA4	94	92.055	Takifugu_rubripes
ENSOMEG00000016626	-	67	86.423	ENSTNIG00000004859	-	96	87.189	Tetraodon_nigroviridis
ENSOMEG00000016626	-	99	90.096	ENSTNIG00000004536	SMARCA4	97	90.130	Tetraodon_nigroviridis
ENSOMEG00000016626	-	99	80.869	ENSTTRG00000009519	SMARCA4	96	79.818	Tursiops_truncatus
ENSOMEG00000016626	-	99	83.672	ENSUAMG00000014661	SMARCA4	96	83.571	Ursus_americanus
ENSOMEG00000016626	-	95	79.355	ENSUMAG00000022005	SMARCA4	98	90.350	Ursus_maritimus
ENSOMEG00000016626	-	99	83.612	ENSVVUG00000017820	SMARCA4	93	83.509	Vulpes_vulpes
ENSOMEG00000016626	-	99	78.703	ENSXETG00000009355	smarca4	90	84.011	Xenopus_tropicalis
ENSOMEG00000016626	-	99	86.150	ENSXCOG00000013494	-	95	87.571	Xiphophorus_couchianus
ENSOMEG00000016626	-	100	93.870	ENSXMAG00000007030	-	97	94.034	Xiphophorus_maculatus
ENSOMEG00000016626	-	96	82.652	ENSXMAG00000006321	smarca4a	97	82.880	Xiphophorus_maculatus