EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOMEG00000016771 (Gene tree)
Gene ID: 112149288
Gene Symbol: tsen34
Alias: -
Full Name: tRNA splicing endonuclease subunit 34
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 4669 bases
Position: chrNVQA01000013.1:28504431-28509099
Accession: 112149288
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000031760	tRNA_int_endo	PF01974.17	1.1e-17	1	1
ENSOMEP00000015226	tRNA_int_endo	PF01974.17	5.7e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000023325	-	1315	-	ENSOMEP00000015226	304 (aa)	-	-
ENSOMET00000023334	-	1373	-	ENSOMEP00000031760	281 (aa)	XP_024132679	UPI000CF7E4E6

Gene Model

Click here to download ENSOMEG00000016771's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000016771's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000016771	tsen34	95	73.118	ENSAPOG00000001248	tsen34	96	73.118	Acanthochromis_polyacanthus
ENSOMEG00000016771	tsen34	94	71.053	ENSAPOG00000008579	-	96	72.243	Acanthochromis_polyacanthus
ENSOMEG00000016771	tsen34	93	72.830	ENSAPOG00000012557	-	92	72.830	Acanthochromis_polyacanthus
ENSOMEG00000016771	tsen34	98	70.463	ENSACIG00000007110	tsen34	93	70.463	Amphilophus_citrinellus
ENSOMEG00000016771	tsen34	100	69.625	ENSAOCG00000006905	tsen34	100	69.625	Amphiprion_ocellaris
ENSOMEG00000016771	tsen34	100	68.942	ENSAPEG00000019171	tsen34	100	68.942	Amphiprion_percula
ENSOMEG00000016771	tsen34	97	69.965	ENSATEG00000019800	tsen34	99	68.905	Anabas_testudineus
ENSOMEG00000016771	tsen34	95	71.375	ENSACLG00000009661	tsen34	96	69.892	Astatotilapia_calliptera
ENSOMEG00000016771	tsen34	94	54.122	ENSAMXG00000017568	tsen34	88	53.214	Astyanax_mexicanus
ENSOMEG00000016771	tsen34	92	41.638	ENSCJAG00000001128	TSEN34	98	39.931	Callithrix_jacchus
ENSOMEG00000016771	tsen34	67	42.289	ENSCAPG00000012811	-	89	44.324	Cavia_aperea
ENSOMEG00000016771	tsen34	92	40.203	ENSCCAG00000036023	TSEN34	99	41.356	Cebus_capucinus
ENSOMEG00000016771	tsen34	92	40.391	ENSCSAG00000001891	TSEN34	50	50.000	Chlorocebus_sabaeus
ENSOMEG00000016771	tsen34	51	45.161	ENSCGRG00000008494	Tsen34	56	53.030	Cricetulus_griseus_crigri
ENSOMEG00000016771	tsen34	99	61.724	ENSCSEG00000006278	tsen34	96	61.724	Cynoglossus_semilaevis
ENSOMEG00000016771	tsen34	99	53.425	ENSDARG00000061370	tsen34	94	53.425	Danio_rerio
ENSOMEG00000016771	tsen34	93	54.286	ENSELUG00000006262	tsen34	92	53.929	Esox_lucius
ENSOMEG00000016771	tsen34	54	49.673	ENSFDAG00000017995	TSEN34	61	49.351	Fukomys_damarensis
ENSOMEG00000016771	tsen34	96	71.579	ENSFHEG00000008791	tsen34	97	71.579	Fundulus_heteroclitus
ENSOMEG00000016771	tsen34	64	67.033	ENSGMOG00000001961	tsen34	85	66.864	Gadus_morhua
ENSOMEG00000016771	tsen34	96	73.118	ENSGAFG00000016880	tsen34	99	73.118	Gambusia_affinis
ENSOMEG00000016771	tsen34	93	64.286	ENSGACG00000004800	tsen34	99	64.286	Gasterosteus_aculeatus
ENSOMEG00000016771	tsen34	94	43.643	ENSGAGG00000008982	TSEN34	73	43.206	Gopherus_agassizii
ENSOMEG00000016771	tsen34	100	69.655	ENSHBUG00000016593	tsen34	90	69.204	Haplochromis_burtoni
ENSOMEG00000016771	tsen34	95	57.993	ENSHCOG00000001368	tsen34	95	58.672	Hippocampus_comes
ENSOMEG00000016771	tsen34	98	50.502	ENSIPUG00000008359	tsen34	92	48.136	Ictalurus_punctatus
ENSOMEG00000016771	tsen34	94	73.432	ENSKMAG00000007181	tsen34	86	73.432	Kryptolebias_marmoratus
ENSOMEG00000016771	tsen34	95	71.377	ENSLBEG00000015001	tsen34	96	71.014	Labrus_bergylta
ENSOMEG00000016771	tsen34	51	42.308	ENSLACG00000013346	-	56	49.624	Latimeria_chalumnae
ENSOMEG00000016771	tsen34	93	53.114	ENSLOCG00000001887	tsen34	97	53.114	Lepisosteus_oculatus
ENSOMEG00000016771	tsen34	97	69.534	ENSMAMG00000018407	tsen34	99	71.631	Mastacembelus_armatus
ENSOMEG00000016771	tsen34	100	69.204	ENSMZEG00005002313	tsen34	100	69.204	Maylandia_zebra
ENSOMEG00000016771	tsen34	95	68.581	ENSMMOG00000009551	tsen34	96	64.202	Mola_mola
ENSOMEG00000016771	tsen34	100	67.483	ENSMALG00000018918	tsen34	100	68.182	Monopterus_albus
ENSOMEG00000016771	tsen34	92	38.835	ENSMUSG00000035585	Tsen34	91	49.495	Mus_musculus
ENSOMEG00000016771	tsen34	95	69.784	ENSNBRG00000008640	tsen34	98	66.543	Neolamprologus_brichardi
ENSOMEG00000016771	tsen34	89	46.008	ENSMEUG00000002978	TSEN34	96	46.008	Notamacropus_eugenii
ENSOMEG00000016771	tsen34	94	71.429	ENSONIG00000017253	tsen34	100	71.429	Oreochromis_niloticus
ENSOMEG00000016771	tsen34	100	84.698	ENSORLG00015012740	tsen34	100	84.698	Oryzias_latipes_hsok
ENSOMEG00000016771	tsen34	95	54.480	ENSPKIG00000014674	tsen34	96	54.480	Paramormyrops_kingsleyae
ENSOMEG00000016771	tsen34	96	72.085	ENSPFOG00000008679	tsen34	99	72.085	Poecilia_formosa
ENSOMEG00000016771	tsen34	99	71.025	ENSPLAG00000017309	tsen34	98	72.954	Poecilia_latipinna
ENSOMEG00000016771	tsen34	96	72.085	ENSPMEG00000005235	tsen34	99	72.085	Poecilia_mexicana
ENSOMEG00000016771	tsen34	98	73.022	ENSPREG00000021784	tsen34	97	73.022	Poecilia_reticulata
ENSOMEG00000016771	tsen34	100	69.204	ENSPNYG00000024090	tsen34	79	69.204	Pundamilia_nyererei
ENSOMEG00000016771	tsen34	95	52.265	ENSPNAG00000028698	tsen34	89	52.265	Pygocentrus_nattereri
ENSOMEG00000016771	tsen34	51	44.516	ENSSHAG00000009295	-	63	52.273	Sarcophilus_harrisii
ENSOMEG00000016771	tsen34	70	55.288	ENSSFOG00015017579	tsen34	76	58.889	Scleropages_formosus
ENSOMEG00000016771	tsen34	94	65.580	ENSSMAG00000005214	tsen34	98	65.580	Scophthalmus_maximus
ENSOMEG00000016771	tsen34	94	69.643	ENSSDUG00000005391	tsen34	95	68.641	Seriola_dumerili
ENSOMEG00000016771	tsen34	97	68.750	ENSSLDG00000006144	tsen34	92	68.750	Seriola_lalandi_dorsalis
ENSOMEG00000016771	tsen34	93	41.176	ENSSPUG00000008447	TSEN34	99	41.176	Sphenodon_punctatus
ENSOMEG00000016771	tsen34	99	71.528	ENSSPAG00000010512	tsen34	99	70.486	Stegastes_partitus
ENSOMEG00000016771	tsen34	95	59.851	ENSTRUG00000000787	tsen34	92	61.029	Takifugu_rubripes
ENSOMEG00000016771	tsen34	93	62.718	ENSTNIG00000001937	-	100	62.500	Tetraodon_nigroviridis
ENSOMEG00000016771	tsen34	94	62.500	ENSTNIG00000011201	tsen34	100	62.838	Tetraodon_nigroviridis
ENSOMEG00000016771	tsen34	93	38.851	ENSXETG00000004597	tsen34	99	38.851	Xenopus_tropicalis
ENSOMEG00000016771	tsen34	96	72.792	ENSXMAG00000024266	tsen34	99	72.792	Xiphophorus_maculatus