EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOMEG00000016866 (Gene tree)
Gene ID: 112149254
Gene Symbol: prpf8
Alias: -
Full Name: pre-mRNA processing factor 8
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 13862 bases
Position: chrNVQA01000013.1:10469393-10483254
Accession: ZDB-GENE-030131-577
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000031784	RRM_4	PF10598.9	9.1e-48	1	1
ENSOMEP00000031784	U5_2-snRNA_bdg	PF10597.9	8.1e-74	1	1
ENSOMEP00000031784	PRO8NT	PF08082.11	3.8e-87	1	1
ENSOMEP00000031784	U6-snRNA_bdg	PF10596.9	2e-89	1	1
ENSOMEP00000031784	PROCN	PF08083.11	5.4e-236	1	1
ENSOMEP00000031784	PRP8_domainIV	PF12134.8	4.7e-130	1	1
ENSOMEP00000031784	PROCT	PF08084.11	3.1e-53	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000023366	-	7008	-	ENSOMEP00000031784	2335 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000016866's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000016866's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000016866	prpf8	99	96.187	ENSG00000174231	PRPF8	99	96.187	Homo_sapiens
ENSOMEG00000016866	prpf8	100	97.069	ENSAPOG00000010079	prpf8	100	97.069	Acanthochromis_polyacanthus
ENSOMEG00000016866	prpf8	99	96.187	ENSAMEG00000007940	PRPF8	99	96.187	Ailuropoda_melanoleuca
ENSOMEG00000016866	prpf8	100	95.846	ENSACIG00000018280	prpf8	100	95.846	Amphilophus_citrinellus
ENSOMEG00000016866	prpf8	100	97.026	ENSAOCG00000010725	prpf8	100	97.026	Amphiprion_ocellaris
ENSOMEG00000016866	prpf8	100	97.026	ENSAPEG00000014397	prpf8	100	97.026	Amphiprion_percula
ENSOMEG00000016866	prpf8	100	96.059	ENSATEG00000010062	prpf8	100	96.059	Anabas_testudineus
ENSOMEG00000016866	prpf8	95	96.441	ENSAPLG00000010357	PRPF8	100	96.441	Anas_platyrhynchos
ENSOMEG00000016866	prpf8	83	96.338	ENSACAG00000014784	PRPF8	99	96.338	Anolis_carolinensis
ENSOMEG00000016866	prpf8	99	96.187	ENSANAG00000032629	PRPF8	99	96.187	Aotus_nancymaae
ENSOMEG00000016866	prpf8	100	97.196	ENSACLG00000020858	prpf8	100	97.196	Astatotilapia_calliptera
ENSOMEG00000016866	prpf8	100	96.474	ENSAMXG00000020291	prpf8	100	96.474	Astyanax_mexicanus
ENSOMEG00000016866	prpf8	99	96.187	ENSBTAG00000011488	PRPF8	99	96.187	Bos_taurus
ENSOMEG00000016866	prpf8	98	85.069	WBGene00004187	prp-8	99	85.050	Caenorhabditis_elegans
ENSOMEG00000016866	prpf8	99	96.187	ENSCJAG00000001911	PRPF8	99	96.187	Callithrix_jacchus
ENSOMEG00000016866	prpf8	99	96.187	ENSCAFG00000019221	PRPF8	99	96.187	Canis_familiaris
ENSOMEG00000016866	prpf8	95	96.475	ENSCAFG00020009943	PRPF8	100	96.475	Canis_lupus_dingo
ENSOMEG00000016866	prpf8	99	96.187	ENSCHIG00000017499	PRPF8	99	96.187	Capra_hircus
ENSOMEG00000016866	prpf8	99	96.187	ENSTSYG00000014120	PRPF8	99	96.187	Carlito_syrichta
ENSOMEG00000016866	prpf8	95	94.254	ENSCAPG00000009459	PRPF8	99	94.254	Cavia_aperea
ENSOMEG00000016866	prpf8	99	96.187	ENSCPOG00000010379	PRPF8	99	96.187	Cavia_porcellus
ENSOMEG00000016866	prpf8	99	96.187	ENSCCAG00000031983	-	99	96.187	Cebus_capucinus
ENSOMEG00000016866	prpf8	99	96.187	ENSCATG00000038595	PRPF8	99	96.187	Cercocebus_atys
ENSOMEG00000016866	prpf8	99	96.187	ENSCLAG00000004388	PRPF8	99	96.187	Chinchilla_lanigera
ENSOMEG00000016866	prpf8	99	96.187	ENSCSAG00000013929	PRPF8	99	96.187	Chlorocebus_sabaeus
ENSOMEG00000016866	prpf8	80	93.612	ENSCHOG00000008590	PRPF8	87	95.543	Choloepus_hoffmanni
ENSOMEG00000016866	prpf8	100	95.497	ENSCPBG00000020409	PRPF8	100	95.497	Chrysemys_picta_bellii
ENSOMEG00000016866	prpf8	98	92.874	ENSCSAVG00000007825	-	100	89.217	Ciona_savignyi
ENSOMEG00000016866	prpf8	99	96.187	ENSCANG00000043088	PRPF8	99	96.187	Colobus_angolensis_palliatus
ENSOMEG00000016866	prpf8	74	99.213	ENSCGRG00000005129	Prpf8	100	99.213	Cricetulus_griseus_crigri
ENSOMEG00000016866	prpf8	100	96.644	ENSCSEG00000007905	prpf8	100	96.602	Cynoglossus_semilaevis
ENSOMEG00000016866	prpf8	100	96.559	ENSDARG00000026180	prpf8	100	96.559	Danio_rerio
ENSOMEG00000016866	prpf8	93	95.662	ENSDNOG00000018471	PRPF8	99	95.662	Dasypus_novemcinctus
ENSOMEG00000016866	prpf8	86	96.591	ENSDORG00000006185	Prpf8	96	96.591	Dipodomys_ordii
ENSOMEG00000016866	prpf8	99	89.812	FBgn0033688	Prp8	97	89.845	Drosophila_melanogaster
ENSOMEG00000016866	prpf8	99	90.831	ENSETEG00000017592	PRPF8	99	90.831	Echinops_telfairi
ENSOMEG00000016866	prpf8	98	92.401	ENSEBUG00000006548	prpf8	99	91.869	Eptatretus_burgeri
ENSOMEG00000016866	prpf8	99	96.187	ENSEASG00005009514	PRPF8	99	97.554	Equus_asinus_asinus
ENSOMEG00000016866	prpf8	97	96.527	ENSECAG00000021318	PRPF8	100	96.527	Equus_caballus
ENSOMEG00000016866	prpf8	66	98.519	ENSEEUG00000012120	-	65	98.519	Erinaceus_europaeus
ENSOMEG00000016866	prpf8	98	95.312	ENSELUG00000007120	prpf8	99	95.312	Esox_lucius
ENSOMEG00000016866	prpf8	99	96.187	ENSFCAG00000006297	PRPF8	99	96.187	Felis_catus
ENSOMEG00000016866	prpf8	100	95.582	ENSFALG00000006628	PRPF8	100	95.582	Ficedula_albicollis
ENSOMEG00000016866	prpf8	99	96.187	ENSFDAG00000004711	PRPF8	99	96.187	Fukomys_damarensis
ENSOMEG00000016866	prpf8	100	96.644	ENSFHEG00000021084	prpf8	100	96.644	Fundulus_heteroclitus
ENSOMEG00000016866	prpf8	98	95.092	ENSGMOG00000002028	prpf8	99	95.126	Gadus_morhua
ENSOMEG00000016866	prpf8	100	95.582	ENSGALG00000002943	PRPF8	100	95.582	Gallus_gallus
ENSOMEG00000016866	prpf8	99	97.357	ENSGAFG00000010337	prpf8	99	97.357	Gambusia_affinis
ENSOMEG00000016866	prpf8	100	96.899	ENSGACG00000008504	prpf8	100	96.884	Gasterosteus_aculeatus
ENSOMEG00000016866	prpf8	100	95.540	ENSGAGG00000008350	PRPF8	100	95.540	Gopherus_agassizii
ENSOMEG00000016866	prpf8	99	96.187	ENSGGOG00000005516	PRPF8	99	96.187	Gorilla_gorilla
ENSOMEG00000016866	prpf8	100	96.517	ENSHBUG00000016192	prpf8	100	96.517	Haplochromis_burtoni
ENSOMEG00000016866	prpf8	99	96.187	ENSHGLG00000012029	PRPF8	99	96.187	Heterocephalus_glaber_female
ENSOMEG00000016866	prpf8	99	96.187	ENSHGLG00100016494	PRPF8	99	96.187	Heterocephalus_glaber_male
ENSOMEG00000016866	prpf8	100	96.984	ENSHCOG00000016414	prpf8	100	96.984	Hippocampus_comes
ENSOMEG00000016866	prpf8	100	96.389	ENSIPUG00000023230	prpf8	100	96.389	Ictalurus_punctatus
ENSOMEG00000016866	prpf8	99	96.187	ENSSTOG00000005128	PRPF8	99	96.187	Ictidomys_tridecemlineatus
ENSOMEG00000016866	prpf8	99	94.045	ENSJJAG00000021159	Prpf8	99	94.380	Jaculus_jaculus
ENSOMEG00000016866	prpf8	99	97.100	ENSKMAG00000016118	prpf8	100	97.100	Kryptolebias_marmoratus
ENSOMEG00000016866	prpf8	100	96.814	ENSLBEG00000026903	prpf8	100	96.814	Labrus_bergylta
ENSOMEG00000016866	prpf8	95	92.927	ENSLACG00000010479	PRPF8	99	96.377	Latimeria_chalumnae
ENSOMEG00000016866	prpf8	99	96.907	ENSLOCG00000005409	prpf8	99	96.907	Lepisosteus_oculatus
ENSOMEG00000016866	prpf8	99	96.187	ENSLAFG00000015445	PRPF8	99	96.187	Loxodonta_africana
ENSOMEG00000016866	prpf8	99	96.187	ENSMFAG00000039995	PRPF8	99	96.187	Macaca_fascicularis
ENSOMEG00000016866	prpf8	99	96.187	ENSMMUG00000004820	PRPF8	99	96.187	Macaca_mulatta
ENSOMEG00000016866	prpf8	99	96.187	ENSMNEG00000035713	PRPF8	99	96.187	Macaca_nemestrina
ENSOMEG00000016866	prpf8	99	96.187	ENSMLEG00000037937	PRPF8	99	96.187	Mandrillus_leucophaeus
ENSOMEG00000016866	prpf8	100	96.899	ENSMAMG00000008919	prpf8	100	96.899	Mastacembelus_armatus
ENSOMEG00000016866	prpf8	100	97.196	ENSMZEG00005015073	prpf8	100	97.196	Maylandia_zebra
ENSOMEG00000016866	prpf8	100	95.582	ENSMGAG00000004769	PRPF8	100	95.582	Meleagris_gallopavo
ENSOMEG00000016866	prpf8	99	96.187	ENSMICG00000010320	PRPF8	99	96.187	Microcebus_murinus
ENSOMEG00000016866	prpf8	99	96.187	ENSMOCG00000016838	Prpf8	99	96.187	Microtus_ochrogaster
ENSOMEG00000016866	prpf8	100	96.432	ENSMMOG00000011887	prpf8	100	96.432	Mola_mola
ENSOMEG00000016866	prpf8	99	96.101	ENSMODG00000010480	PRPF8	99	96.101	Monodelphis_domestica
ENSOMEG00000016866	prpf8	97	95.087	ENSMALG00000003558	prpf8	100	95.087	Monopterus_albus
ENSOMEG00000016866	prpf8	99	96.144	MGP_CAROLIEiJ_G0016740	Prpf8	99	96.144	Mus_caroli
ENSOMEG00000016866	prpf8	99	96.144	ENSMUSG00000020850	Prpf8	99	96.144	Mus_musculus
ENSOMEG00000016866	prpf8	99	96.101	MGP_PahariEiJ_G0017877	Prpf8	99	96.101	Mus_pahari
ENSOMEG00000016866	prpf8	99	96.144	MGP_SPRETEiJ_G0017583	Prpf8	99	96.144	Mus_spretus
ENSOMEG00000016866	prpf8	99	96.187	ENSMPUG00000013227	PRPF8	99	96.187	Mustela_putorius_furo
ENSOMEG00000016866	prpf8	99	96.063	ENSMLUG00000002666	PRPF8	99	96.063	Myotis_lucifugus
ENSOMEG00000016866	prpf8	99	94.430	ENSNGAG00000005305	Prpf8	99	94.769	Nannospalax_galili
ENSOMEG00000016866	prpf8	100	97.239	ENSNBRG00000013127	prpf8	100	97.239	Neolamprologus_brichardi
ENSOMEG00000016866	prpf8	96	94.386	ENSNLEG00000000897	PRPF8	97	94.198	Nomascus_leucogenys
ENSOMEG00000016866	prpf8	98	94.654	ENSMEUG00000015999	PRPF8	100	94.654	Notamacropus_eugenii
ENSOMEG00000016866	prpf8	99	94.687	ENSOPRG00000003102	PRPF8	99	94.687	Ochotona_princeps
ENSOMEG00000016866	prpf8	99	96.187	ENSODEG00000008468	PRPF8	99	96.187	Octodon_degus
ENSOMEG00000016866	prpf8	100	97.239	ENSONIG00000008153	prpf8	100	97.239	Oreochromis_niloticus
ENSOMEG00000016866	prpf8	81	97.396	ENSOANG00000004250	PRPF8	97	97.396	Ornithorhynchus_anatinus
ENSOMEG00000016866	prpf8	99	96.187	ENSOCUG00000000081	PRPF8	99	96.187	Oryctolagus_cuniculus
ENSOMEG00000016866	prpf8	100	97.961	ENSORLG00000008036	prpf8	100	97.961	Oryzias_latipes
ENSOMEG00000016866	prpf8	100	97.919	ENSORLG00020021070	prpf8	100	97.919	Oryzias_latipes_hni
ENSOMEG00000016866	prpf8	100	97.961	ENSORLG00015002340	prpf8	100	97.961	Oryzias_latipes_hsok
ENSOMEG00000016866	prpf8	99	96.063	ENSOARG00000013312	PRPF8	99	96.063	Ovis_aries
ENSOMEG00000016866	prpf8	99	96.187	ENSPPAG00000042753	PRPF8	99	96.187	Pan_paniscus
ENSOMEG00000016866	prpf8	99	96.187	ENSPPRG00000008746	PRPF8	99	96.187	Panthera_pardus
ENSOMEG00000016866	prpf8	99	96.101	ENSPTIG00000019200	PRPF8	99	96.101	Panthera_tigris_altaica
ENSOMEG00000016866	prpf8	99	96.187	ENSPTRG00000039576	PRPF8	99	96.187	Pan_troglodytes
ENSOMEG00000016866	prpf8	98	96.568	ENSPANG00000024607	PRPF8	98	96.568	Papio_anubis
ENSOMEG00000016866	prpf8	100	96.389	ENSPKIG00000011201	prpf8	100	96.389	Paramormyrops_kingsleyae
ENSOMEG00000016866	prpf8	100	95.455	ENSPSIG00000013393	PRPF8	99	96.541	Pelodiscus_sinensis
ENSOMEG00000016866	prpf8	99	96.187	ENSPEMG00000021699	Prpf8	99	96.187	Peromyscus_maniculatus_bairdii
ENSOMEG00000016866	prpf8	95	92.160	ENSPMAG00000005438	prpf8	100	91.659	Petromyzon_marinus
ENSOMEG00000016866	prpf8	99	96.101	ENSPCIG00000022603	PRPF8	100	96.386	Phascolarctos_cinereus
ENSOMEG00000016866	prpf8	100	97.243	ENSPFOG00000007005	prpf8	100	97.243	Poecilia_formosa
ENSOMEG00000016866	prpf8	98	96.109	ENSPLAG00000020777	prpf8	99	96.066	Poecilia_latipinna
ENSOMEG00000016866	prpf8	100	97.243	ENSPMEG00000004051	prpf8	100	97.243	Poecilia_mexicana
ENSOMEG00000016866	prpf8	100	97.286	ENSPREG00000021902	prpf8	100	97.286	Poecilia_reticulata
ENSOMEG00000016866	prpf8	99	96.187	ENSPPYG00000007777	PRPF8	99	96.187	Pongo_abelii
ENSOMEG00000016866	prpf8	89	95.878	ENSPCAG00000008938	PRPF8	89	96.981	Procavia_capensis
ENSOMEG00000016866	prpf8	99	96.187	ENSPCOG00000015182	PRPF8	99	96.187	Propithecus_coquereli
ENSOMEG00000016866	prpf8	92	96.452	ENSPVAG00000002134	PRPF8	93	96.452	Pteropus_vampyrus
ENSOMEG00000016866	prpf8	100	96.517	ENSPNYG00000016356	prpf8	100	96.517	Pundamilia_nyererei
ENSOMEG00000016866	prpf8	100	96.474	ENSPNAG00000009247	prpf8	100	96.474	Pygocentrus_nattereri
ENSOMEG00000016866	prpf8	99	96.144	ENSRNOG00000003495	Prpf8	99	96.144	Rattus_norvegicus
ENSOMEG00000016866	prpf8	99	96.187	ENSRBIG00000031219	PRPF8	100	96.029	Rhinopithecus_bieti
ENSOMEG00000016866	prpf8	99	96.187	ENSRROG00000038014	PRPF8	100	96.029	Rhinopithecus_roxellana
ENSOMEG00000016866	prpf8	98	61.601	YHR165C	PRP8	95	61.568	Saccharomyces_cerevisiae
ENSOMEG00000016866	prpf8	99	96.187	ENSSBOG00000029717	PRPF8	99	96.187	Saimiri_boliviensis_boliviensis
ENSOMEG00000016866	prpf8	99	96.058	ENSSHAG00000006167	PRPF8	99	96.058	Sarcophilus_harrisii
ENSOMEG00000016866	prpf8	100	96.262	ENSSFOG00015013905	prpf8	100	96.262	Scleropages_formosus
ENSOMEG00000016866	prpf8	100	96.686	ENSSMAG00000017736	prpf8	100	96.686	Scophthalmus_maximus
ENSOMEG00000016866	prpf8	100	97.111	ENSSDUG00000003029	prpf8	100	97.111	Seriola_dumerili
ENSOMEG00000016866	prpf8	68	97.434	ENSSLDG00000017096	prpf8	100	97.434	Seriola_lalandi_dorsalis
ENSOMEG00000016866	prpf8	85	96.970	ENSSARG00000002892	PRPF8	84	96.970	Sorex_araneus
ENSOMEG00000016866	prpf8	100	95.582	ENSSPUG00000007463	PRPF8	99	96.585	Sphenodon_punctatus
ENSOMEG00000016866	prpf8	100	96.474	ENSSPAG00000015639	prpf8	100	96.474	Stegastes_partitus
ENSOMEG00000016866	prpf8	99	96.187	ENSSSCG00000017817	PRPF8	99	96.187	Sus_scrofa
ENSOMEG00000016866	prpf8	52	98.429	ENSTGUG00000015597	-	95	98.429	Taeniopygia_guttata
ENSOMEG00000016866	prpf8	100	95.582	ENSTGUG00000005648	-	100	95.582	Taeniopygia_guttata
ENSOMEG00000016866	prpf8	100	96.559	ENSTRUG00000015906	prpf8	100	96.559	Takifugu_rubripes
ENSOMEG00000016866	prpf8	95	97.133	ENSTNIG00000003460	prpf8	99	97.133	Tetraodon_nigroviridis
ENSOMEG00000016866	prpf8	88	98.911	ENSTBEG00000006431	PRPF8	89	98.911	Tupaia_belangeri
ENSOMEG00000016866	prpf8	99	95.587	ENSTTRG00000006869	PRPF8	99	95.587	Tursiops_truncatus
ENSOMEG00000016866	prpf8	54	96.820	ENSUAMG00000015644	-	95	96.820	Ursus_americanus
ENSOMEG00000016866	prpf8	99	95.930	ENSUMAG00000009385	PRPF8	99	95.930	Ursus_maritimus
ENSOMEG00000016866	prpf8	70	98.621	ENSVPAG00000006063	-	70	98.621	Vicugna_pacos
ENSOMEG00000016866	prpf8	100	95.383	ENSVVUG00000021695	PRPF8	100	95.383	Vulpes_vulpes
ENSOMEG00000016866	prpf8	99	96.048	ENSXETG00000022259	prpf8	99	96.048	Xenopus_tropicalis
ENSOMEG00000016866	prpf8	100	96.941	ENSXCOG00000012775	prpf8	100	96.941	Xiphophorus_couchianus
ENSOMEG00000016866	prpf8	100	96.899	ENSXMAG00000008505	prpf8	100	96.899	Xiphophorus_maculatus